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Ligand clusters for UniProt code P9WG57

Ligand clusters for P9WG57: Flavin-dependent thymidylate synthase from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)

Top 6 (of 10) ligand clusters
Cluster 1.
7 ligand types
16 ligands
Cluster 2.
5 ligand types
8 ligands
Cluster 3.
1 ligand type
3 ligands
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
1 ligand
Cluster 6.
1 ligand type
1 ligand
Representative protein: 3gwcA  
JSmol
 

Structures

PDB   Schematic diagram
3gwcA    
3hzgA    
2af6A    
2gq2B    
2gq2A    

 

 Cluster 1 contains 7 ligand types

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Ligand Description


 
1. Ligand: FAD × 6
flavin adenine dinucleotide
Flavin-Adenine dinucleotide
PDB codes: 2af6(A), 3gwc(A), 3hzg(A),


 
2. Ligand: GOL × 1
glycerin
Glycerol
PDB code: 2af6(A).


 
3. Ligand: BRU × 1
5-Bromo-2'-Deoxyuridine-5'-Monophosphate
PDB code: 2af6(A).


 
4. Ligand: NAP × 4
Nadp nicotinamide-Adenine-Dinucleotide phosphate
PDB codes: 2gq2(A),


 
5. Ligand: PO4 × 2
Phosphate ion
PDB codes: 3hzg(A),


 
6. Ligand: PGE × 1
Triethylene glycol
PDB code: 2gq2(A).


 
7. Ligand: UFP × 1
5-Fluoro-2'-Deoxyuridine-5'-Monophosphate
PDB code: 3gwc(A).

 

 Cluster 2 contains 5 ligand types

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Ligand Description


 
1. Ligand: FAD × 3
flavin adenine dinucleotide
Flavin-Adenine dinucleotide
PDB codes: 2af6(A), 3gwc(A), 3hzg(A).


 
2. Ligand: BRU × 1
5-Bromo-2'-Deoxyuridine-5'-Monophosphate
PDB code: 2af6(A).


 
3. Ligand: NAP × 2
Nadp nicotinamide-Adenine-Dinucleotide phosphate
PDB codes: 2gq2(A),


 
4. Ligand: PO4 × 1
Phosphate ion
PDB code: 3hzg(A).


 
5. Ligand: UFP × 1
5-Fluoro-2'-Deoxyuridine-5'-Monophosphate
PDB code: 3gwc(A).

 

 Cluster 3 contains 1 ligand type

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Ligand Description


 
1. Ligand: GOL × 3
glycerin
Glycerol
PDB codes: 2af6(A), 2gq2(A),

 

 Cluster 4 contains 1 ligand type

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Ligand Description


 
1. Ligand: GOL × 1
glycerin
Glycerol
PDB code: 2af6(A).

 

 Cluster 5 contains 1 ligand type

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Ligand Description


 
1. Ligand: GOL × 1
glycerin
Glycerol
PDB code: 2gq2(B).

 

 Cluster 6 contains 1 ligand type

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Ligand Description


 
1. Ligand: GOL × 1
glycerin
Glycerol
PDB code: 3hzg(A).

 

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