Ligand clusters for UniProt code P9WFF7

Ligand clusters for P9WFF7: Decaprenyl diphosphate synthase from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)

		Top 6 (of 11) ligand clusters Cluster 1. 7 ligand types 7 ligands Cluster 2. 3 ligand types 3 ligands Cluster 3. 1 ligand type 1 ligand Cluster 4. 1 ligand type 1 ligand Cluster 5. 1 ligand type 1 ligand Cluster 6. 1 ligand type 1 ligand
Representative protein: 6imeA

Structures

PDB		Schematic diagram
6imeA
2vg3A
4oncA
2vg2A

Cluster 1 contains 7 ligand types

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Ligand		Description
		1. Ligand: DPO × 1 Diphosphate PDB code: 2vg2(A).
		2. Ligand: IPE × 1 3-Methylbut-3-Enyl trihydrogen diphosphate PDB code: 2vg2(A).
_Mg		3. Metal: _MG × 1 PDB code: 2vg3(A).
		4. Ligand: 40B × 1 [Hydroxy(1,1':3',1''-Terphenyl-3-Yl) methanediyl]bis(phosphonic acid) PDB code: 4onc(A).
		5. Ligand: GPP × 1 Geranyl diphosphate PDB code: 2vg3(A).
		6. Ligand: GST × 1 Geranyl s-Thiolodiphosphate PDB code: 6ime(A).
		7. Ligand: PO4 × 1 Phosphate ion PDB code: 2vg3(A).

Cluster 2 contains 3 ligand types

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Ligand		Description
_Mg		1. Metal: _MG × 1 PDB code: 6ime(A).
		2. Ligand: GPP × 1 Geranyl diphosphate PDB code: 2vg3(A).
		3. Ligand: ISY × 1 3-Methylbut-3-Enylsulfanyl(phosphonooxy)phosphinic acid PDB code: 6ime(A).

Cluster 3 contains 1 ligand type

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Ligand		Description
		1. Ligand: GOL × 1 glycerin Glycerol PDB code: 2vg2(A).

Cluster 4 contains 1 ligand type

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Ligand		Description
		1. Ligand: GOL × 1 glycerin Glycerol PDB code: 2vg2(A).

Cluster 5 contains 1 ligand type

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Ligand		Description
		1. Ligand: GOL × 1 glycerin Glycerol PDB code: 2vg2(A).

Cluster 6 contains 1 ligand type

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Ligand		Description
		1. Ligand: GOL × 1 glycerin Glycerol PDB code: 2vg2(A).