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Ligand clusters for UniProt code P83797

Ligand clusters for P83797: Cytochrome b6-f complex subunit 5 from Mastigocladus laminosus

4 ligand clusters
Cluster 1.
3 ligand types
14 ligands
Cluster 2.
1 ligand type
1 ligand
Cluster 3.
1 ligand type
3 ligands
Cluster 4.
1 ligand type
2 ligands
Representative protein: 2e74G  
JSmol
 

Structures

PDB   Schematic diagram
2e74G    
4pv1G    
2e75G    
2e76G    
4h0lG    
 more ...

 

 Cluster 1 contains 3 ligand types

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Ligand Description


 
1. Ligand: BCR × 7
beta carotene
Beta-Carotene
PDB codes: 2e74(G), 2e75(G), 2e76(G), 4h0l(G), 4h13(G), 4i7z(G), 4pv1(G).


 
2. Ligand: OPC × 6
(7r,17e)-4-Hydroxy-N,N,N,7-Tetramethyl-7-[(8e)-Octadec- 8-Enoyloxy]-10-Oxo-3,5,9-Trioxa-4-
Phosphaheptacos-17- En-1-Aminium 4-Oxide
PDB codes: 2e74(G), 2e75(G), 2e76(G), 4h0l(G), 4h13(G), 4pv1(G).


 
3. Ligand: OZ2 × 1
(2r)-3-{[(R)-{[(2s)-2,3-Dihydroxypropyl]oxy}(hydroxy) phosphoryl]oxy}-2-[(6z)-Tridec-6-
Enoyloxy]propyl (9z)- Octadec-9-Enoate
PDB code: 4i7z(G).

 

 Cluster 2 contains 1 ligand type

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Ligand Description


 
1. Ligand: HEM × 1
Protoporphyrin IX containing fe
PDB code: 1vf5(T).

 

 Cluster 3 contains 1 ligand type

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Ligand Description


 
1. Ligand: BCR × 3
beta carotene
Beta-Carotene
PDB codes: 1vf5(G), 2d2c(G).

 

 Cluster 4 contains 1 ligand type

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Ligand Description

_Cd
 
1. Metal: _CD × 2
PDB codes: 2e75(G), 4i7z(G).

 

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