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Ligand clusters for UniProt code P83793
Ligand clusters for P83793: Cytochrome f from Mastigocladus laminosus
Top 6 (of 8) ligand clusters
Cluster 1.
4 ligand types
10 ligands
Cluster 2.
3 ligand types
7 ligands
Cluster 3.
2 ligand types
7 ligands
Cluster 4.
2 ligand types
9 ligands
Cluster 5.
1 ligand type
1 ligand
Cluster 6.
1 ligand type
6 ligands
Representative protein: 2e74C
Structures
PDB
Schematic diagram
2e74
C
2e75
C
2e76
C
4h0l
C
4h13
C
more ...
Cluster 1 contains 4 ligand types
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Ligand
Description
1. Ligand:
OPC × 1
(7r,17e)-4-Hydroxy-N,N,N,7-Tetramethyl-7-[(8e)-Octadec- 8-Enoyloxy]-10-Oxo-3,5,9-Trioxa-4-
Phosphaheptacos-17- En-1-Aminium 4-Oxide
PDB code:
2d2c
(C).
2. Ligand:
SQD × 6
1,2-Di-O-Acyl-3-O-[6-Deoxy-6-Sulfo-Alpha-D- Glucopyranosyl]-Sn-Glycerol
PDB codes:
2e74
(C),
2e75
(C),
2e76
(C),
4h0l
(C),
4h13
(C),
4pv1
(C).
3. Ligand:
UMQ × 2
Undecyl-Maltoside
PDB codes:
4h0l
(C),
4i7z
(C).
4. Ligand:
1E2 × 1
(2s)-3-(Acetyloxy)-2-Hydroxypropyl 6-Deoxy-6-Sulfo- Beta-D-Glucopyranoside
PDB code:
4i7z
(C).
Cluster 2 contains 3 ligand types
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Ligand
Description
1. Ligand:
UMQ × 4
Undecyl-Maltoside
PDB codes:
2e74
(C),
2e75
(C),
2e76
(C),
4h0l
(C).
2. Ligand:
7PH × 2
(1r)-2-(Dodecanoyloxy)-1-[(Phosphonooxy)methyl]ethyl tetradecanoate
PDB codes:
4h13
(C),
4pv1
(C).
3. Ligand:
OZ2 × 1
(2r)-3-{[(R)-{[(2s)-2,3-Dihydroxypropyl]oxy}(hydroxy) phosphoryl]oxy}-2-[(6z)-Tridec-6-
Enoyloxy]propyl (9z)- Octadec-9-Enoate
PDB code:
4i7z
(C).
Cluster 3 contains 2 ligand types
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Ligand
Description
1. Ligand:
OPC × 6
(7r,17e)-4-Hydroxy-N,N,N,7-Tetramethyl-7-[(8e)-Octadec- 8-Enoyloxy]-10-Oxo-3,5,9-Trioxa-4-
Phosphaheptacos-17- En-1-Aminium 4-Oxide
PDB codes:
2e74
(C),
2e75
(C),
2e76
(C),
4h0l
(C),
4h13
(C),
4pv1
(C).
2. Ligand:
OZ2 × 1
(2r)-3-{[(R)-{[(2s)-2,3-Dihydroxypropyl]oxy}(hydroxy) phosphoryl]oxy}-2-[(6z)-Tridec-6-
Enoyloxy]propyl (9z)- Octadec-9-Enoate
PDB code:
4i7z
(C).
Cluster 4 contains 2 ligand types
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Ligand
Description
1. Ligand:
HEM × 8
Protoporphyrin IX containing fe
PDB codes:
1vf5
(C),
2d2c
(C),
2e74
(C),
2e75
(C),
2e76
(C),
4h0l
(C),
4h13
(C),
4i7z
(C).
2. Ligand:
HEC × 1
Heme c
PDB code:
4pv1
(C).
Cluster 5 contains 1 ligand type
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Ligand
Description
1. Ligand:
BNT × 1
2,5-Dibromo-3-Isopropyl-6-Methylbenzo-1,4-Quinone
PDB code:
2d2c
(C).
Cluster 6 contains 1 ligand type
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Ligand
Description
_Cd
1. Metal:
_CD × 6
PDB codes:
2e74
(C),
2e75
(C),
2e76
(C),
4h0l
(C),
4h13
(C),
4i7z
(C).