Ligand clusters for UniProt code P83792

Ligand clusters for P83792: Cytochrome b6-f complex subunit 4 from Mastigocladus laminosus

		6 ligand clusters Cluster 1. 16 ligand types 37 ligands Cluster 2. 6 ligand types 19 ligands Cluster 3. 3 ligand types 12 ligands Cluster 4. 1 ligand type 1 ligand Cluster 5. 1 ligand type 1 ligand Cluster 6. 1 ligand type 4 ligands
Representative protein: 2e74B

Structures

PDB		Schematic diagram
2e74B
4h0lB
2e75B
2e76B
4i7zB
		more ...

Cluster 1 contains 16 ligand types

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Ligand		Description
		1. Ligand: QNO × 1 2-Nonyl-4-Hydroxyquinoline n-Oxide PDB code: 2e75(B).
		2. Ligand: OPC × 3 (7r,17e)-4-Hydroxy-N,N,N,7-Tetramethyl-7-[(8e)- Octadec-8-Enoyloxy]-10-Oxo-3,5,9-Trioxa-4- Phosphaheptacos-17-En-1-Aminium 4-Oxide PDB codes: 1vf5(B), 2d2c(B),
		3. Ligand: UMQ × 4 Undecyl-Maltoside PDB codes: 2e74(B), 2e75(B),
		4. Ligand: HEC × 1 Heme c PDB code: 2d2c(B).
		5. Ligand: SQD × 2 1,2-Di-O-Acyl-3-O-[6-Deoxy-6-Sulfo-Alpha-D- Glucopyranosyl]-Sn-Glycerol PDB codes: 2e74(B), 2e75(B).
		6. Ligand: HEM × 3 Protoporphyrin IX containing fe PDB codes: 1vf5(B), 2e74(B), 2e75(B).
		7. Ligand: UMQ × 6 Undecyl-Maltoside PDB codes: 2e76(B), 4h0l(B), 4h13(B), 4i7z(B), 4pv1(B).
		8. Ligand: HEM × 4 Protoporphyrin IX containing fe PDB codes: 2e76(B), 4h0l(B), 4h13(B), 4i7z(B).
		9. Ligand: SQD × 4 1,2-Di-O-Acyl-3-O-[6-Deoxy-6-Sulfo-Alpha-D- Glucopyranosyl]-Sn-Glycerol PDB codes: 2e76(B), 4h0l(B), 4h13(B), 4pv1(B).
		10. Ligand: 7PH × 2 (1r)-2-(Dodecanoyloxy)-1-[(Phosphonooxy)methyl]ethyl tetradecanoate PDB codes: 4h13(B), 4pv1(B).
		11. Ligand: HEC × 1 Heme c PDB code: 4pv1(B).
		12. Ligand: QNO × 1 2-Nonyl-4-Hydroxyquinoline n-Oxide PDB code: 4h0l(B).
		13. Ligand: TDS × 2 8-Hydroxy-5,7-Dimethoxy-3-Methyl-2-Tridecyl-4h-Chromen- 4-One PDB codes: 2e76(B), 4h13(B).
		14. Ligand: 1E2 × 1 (2s)-3-(Acetyloxy)-2-Hydroxypropyl 6-Deoxy-6-Sulfo- Beta-D-Glucopyranoside PDB code: 4i7z(B).
		15. Ligand: 8K6 × 1 Octadecane PDB code: 4pv1(B).
		16. Ligand: SMA × 1 Stigmatellin a PDB code: 4pv1(B).

Cluster 2 contains 6 ligand types

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Ligand		Description
		1. Ligand: TDS × 1 8-Hydroxy-5,7-Dimethoxy-3-Methyl-2-Tridecyl-4h- Chromen-4-One PDB code: 1vf5(B).
		2. Ligand: OPC × 2 (7r,17e)-4-Hydroxy-N,N,N,7-Tetramethyl-7-[(8e)-Octadec- 8-Enoyloxy]-10-Oxo-3,5,9-Trioxa-4- Phosphaheptacos-17- En-1-Aminium 4-Oxide PDB codes: 2e74(B), 2e75(B).
		3. Ligand: CLA × 9 Chlorophyll a PDB codes: 1vf5(B), 2d2c(B), 2e74(B), 2e75(B), 2e76(B), 4h0l(B), 4h13(B), 4i7z(B), 4pv1(B).
		4. Ligand: OPC × 4 (7r,17e)-4-Hydroxy-N,N,N,7-Tetramethyl-7-[(8e)-Octadec- 8-Enoyloxy]-10-Oxo-3,5,9-Trioxa-4- Phosphaheptacos-17- En-1-Aminium 4-Oxide PDB codes: 2e76(B), 4h0l(B), 4h13(B), 4pv1(B).
		5. Ligand: TDS × 2 8-Hydroxy-5,7-Dimethoxy-3-Methyl-2-Tridecyl-4h-Chromen- 4-One PDB codes: 2e76(B), 4h13(B).
		6. Ligand: OZ2 × 1 (2r)-3-{[(R)-{[(2s)-2,3-Dihydroxypropyl]oxy}(hydroxy) phosphoryl]oxy}-2-[(6z)-Tridec-6- Enoyloxy]propyl (9z)- Octadec-9-Enoate PDB code: 4i7z(B).

Cluster 3 contains 3 ligand types

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Ligand		Description
		1. Ligand: BCR × 5 beta carotene Beta-Carotene PDB codes: 1vf5(B), 2d2c(B), 2e75(B), 4h0l(B), 4pv1(B).
		2. Ligand: OPC × 6 (7r,17e)-4-Hydroxy-N,N,N,7-Tetramethyl-7-[(8e)-Octadec- 8-Enoyloxy]-10-Oxo-3,5,9-Trioxa-4- Phosphaheptacos-17- En-1-Aminium 4-Oxide PDB codes: 2e74(B), 2e75(B), 2e76(B), 4h0l(B), 4h13(B), 4pv1(B).
		3. Ligand: OZ2 × 1 (2r)-3-{[(R)-{[(2s)-2,3-Dihydroxypropyl]oxy}(hydroxy) phosphoryl]oxy}-2-[(6z)-Tridec-6- Enoyloxy]propyl (9z)- Octadec-9-Enoate PDB code: 4i7z(B).

Cluster 4 contains 1 ligand type

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Ligand		Description
		1. Ligand: HEM × 1 Protoporphyrin IX containing fe PDB code: 2e76(B).

Cluster 5 contains 1 ligand type

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Ligand		Description
		1. Ligand: BNT × 1 2,5-Dibromo-3-Isopropyl-6-Methylbenzo-1,4-Quinone PDB code: 2d2c(B).

Cluster 6 contains 1 ligand type

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Ligand		Description
_Cd		1. Metal: _CD × 4 PDB codes: 2e74(B), 2e75(B), 4h0l(B), 4i7z(B).