Ligand clusters for UniProt code P83791

Ligand clusters for P83791: Cytochrome b6 from Mastigocladus laminosus

		Top 6 (of 7) ligand clusters Cluster 1. 16 ligand types 57 ligands Cluster 2. 7 ligand types 23 ligands Cluster 3. 3 ligand types 16 ligands Cluster 4. 2 ligand types 9 ligands Cluster 5. 1 ligand type 2 ligands Cluster 6. 1 ligand type 1 ligand
Representative protein: 2e74A

Structures

PDB		Schematic diagram
2e74A
2e76A
4i7zA
2e75A
4h0lA
		more ...

Cluster 1 contains 16 ligand types

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Ligand		Description
		1. Ligand: PL9 × 1 2,3-Dimethyl-5-(3,7,11,15,19,23,27,31,35-Nonamethyl-2, 6,10,14,18,22,26,30,34- Hexatriacontanonaenyl-2,5- Cyclohexadiene-1,4-Dione-2,3-Dimethyl-5-Solanesyl-1,4- Benzoquinone PDB code: 1vf5(A).
		2. Ligand: QNO × 1 2-Nonyl-4-Hydroxyquinoline n-Oxide PDB code: 2e75(A).
		3. Ligand: OPC × 2 (7r,17e)-4-Hydroxy-N,N,N,7-Tetramethyl-7-[(8e)- Octadec-8-Enoyloxy]-10-Oxo-3,5,9-Trioxa-4- Phosphaheptacos-17-En-1-Aminium 4-Oxide PDB codes: 1vf5(A),
		4. Ligand: UMQ × 8 Undecyl-Maltoside PDB codes: 2e74(A), 2e75(A),
		5. Ligand: HEC × 1 Heme c PDB code: 2d2c(A).
		6. Ligand: HEM × 7 Protoporphyrin IX containing fe PDB codes: 1vf5(A), 2d2c(A), 2e74(A), 2e75(A),
		7. Ligand: UMQ × 16 Undecyl-Maltoside PDB codes: 2e76(A), 4h0l(A), 4h13(A), 4i7z(A), 4pv1(A),
		8. Ligand: HEM × 8 Protoporphyrin IX containing fe PDB codes: 2e76(A), 4h0l(A), 4h13(A), 4i7z(A),
		9. Ligand: 8K6 × 3 Octadecane PDB codes: 4h13(A), 4i7z(A), 4pv1(A).
		10. Ligand: HEC × 2 Heme c PDB codes: 4pv1(A),
		11. Ligand: OPC × 1 (7r,17e)-4-Hydroxy-N,N,N,7-Tetramethyl-7-[(8e)-Octadec- 8-Enoyloxy]-10-Oxo-3,5,9-Trioxa-4- Phosphaheptacos-17- En-1-Aminium 4-Oxide PDB code: 4pv1(A).
		12. Ligand: 7PH × 2 (1r)-2-(Dodecanoyloxy)-1-[(Phosphonooxy)methyl]ethyl tetradecanoate PDB codes: 4h13(A), 4pv1(A).
		13. Ligand: QNO × 1 2-Nonyl-4-Hydroxyquinoline n-Oxide PDB code: 4h0l(A).
		14. Ligand: TDS × 2 8-Hydroxy-5,7-Dimethoxy-3-Methyl-2-Tridecyl-4h-Chromen- 4-One PDB codes: 2e76(A), 4h13(A).
		15. Ligand: OZ2 × 1 (2r)-3-{[(R)-{[(2s)-2,3-Dihydroxypropyl]oxy}(hydroxy) phosphoryl]oxy}-2-[(6z)-Tridec-6- Enoyloxy]propyl (9z)- Octadec-9-Enoate PDB code: 4i7z(A).
		16. Ligand: SMA × 1 Stigmatellin a PDB code: 4pv1(A).

Cluster 2 contains 7 ligand types

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Ligand		Description
		1. Ligand: TDS × 1 8-Hydroxy-5,7-Dimethoxy-3-Methyl-2-Tridecyl-4h- Chromen-4-One PDB code: 1vf5(A).
		2. Ligand: OPC × 3 (7r,17e)-4-Hydroxy-N,N,N,7-Tetramethyl-7-[(8e)- Octadec-8-Enoyloxy]-10-Oxo-3,5,9-Trioxa-4- Phosphaheptacos-17-En-1-Aminium 4-Oxide PDB codes: 1vf5(A), 2e74(A), 2e75(A).
		3. Ligand: CLA × 9 Chlorophyll a PDB codes: 1vf5(A), 2d2c(A), 2e74(A), 2e75(A), 2e76(A), 4h0l(A), 4h13(A), 4i7z(A), 4pv1(A).
		4. Ligand: OPC × 4 (7r,17e)-4-Hydroxy-N,N,N,7-Tetramethyl-7-[(8e)-Octadec- 8-Enoyloxy]-10-Oxo-3,5,9-Trioxa-4- Phosphaheptacos-17- En-1-Aminium 4-Oxide PDB codes: 2e76(A), 4h0l(A), 4h13(A), 4pv1(A).
		5. Ligand: MYS × 3 Pentadecane PDB codes: 4h13(A), 4i7z(A), 4pv1(A).
		6. Ligand: TDS × 2 8-Hydroxy-5,7-Dimethoxy-3-Methyl-2-Tridecyl-4h-Chromen- 4-One PDB codes: 2e76(A), 4h13(A).
		7. Ligand: OZ2 × 1 (2r)-3-{[(R)-{[(2s)-2,3-Dihydroxypropyl]oxy}(hydroxy) phosphoryl]oxy}-2-[(6z)-Tridec-6- Enoyloxy]propyl (9z)- Octadec-9-Enoate PDB code: 4i7z(A).

Cluster 3 contains 3 ligand types

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Ligand		Description
		1. Ligand: BCR × 9 beta carotene Beta-Carotene PDB codes: 1vf5(A), 2d2c(A), 2e74(A), 2e75(A), 2e76(A), 4h0l(A), 4h13(A), 4i7z(A), 4pv1(A).
		2. Ligand: OPC × 6 (7r,17e)-4-Hydroxy-N,N,N,7-Tetramethyl-7-[(8e)-Octadec- 8-Enoyloxy]-10-Oxo-3,5,9-Trioxa-4- Phosphaheptacos-17- En-1-Aminium 4-Oxide PDB codes: 2e74(A), 2e75(A), 2e76(A), 4h0l(A), 4h13(A), 4pv1(A).
		3. Ligand: OZ2 × 1 (2r)-3-{[(R)-{[(2s)-2,3-Dihydroxypropyl]oxy}(hydroxy) phosphoryl]oxy}-2-[(6z)-Tridec-6- Enoyloxy]propyl (9z)- Octadec-9-Enoate PDB code: 4i7z(A).

Cluster 4 contains 2 ligand types

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Ligand		Description
		1. Ligand: HEM × 8 Protoporphyrin IX containing fe PDB codes: 1vf5(A), 2d2c(A), 2e74(A), 2e75(A), 2e76(A), 4h0l(A), 4h13(A), 4i7z(A).
		2. Ligand: HEC × 1 Heme c PDB code: 4pv1(A).

Cluster 5 contains 1 ligand type

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Ligand		Description
		1. Ligand: HEM × 2 Protoporphyrin IX containing fe PDB codes: 1vf5(A), 2d2c(A).

Cluster 6 contains 1 ligand type

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Ligand		Description
		1. Ligand: BNT × 1 2,5-Dibromo-3-Isopropyl-6-Methylbenzo-1,4-Quinone PDB code: 2d2c(A).