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Ligand clusters for UniProt code P80147
Ligand clusters for P80147: 4-aminobutyrate aminotransferase, mitochondrial OS=Sus scrofa GN=ABAT PE=1 SV=2
5 ligand clusters
Cluster 1.
7 ligand types
10 ligands
Cluster 2.
7 ligand types
10 ligands
Cluster 3.
1 ligand type
9 ligands
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
1 ligand
Representative protein: 4y0dA
Structures
PDB
Schematic diagram
4y0d
A
1ohv
A
6b6g
A
1ohy
A
4y0h
A
more ...
Cluster 1 contains 7 ligand types
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Ligand
Description
1. Ligand:
PLP × 2
pyridoxal phosphate
Pyridoxal-5'-Phosphate
PDB codes:
1ohv
(A),
4y0h
(A).
2. Ligand:
ACT × 1
Acetate ion
PDB code:
1ohv
(A).
3. Ligand:
RW2 × 3
(1s)-4-[({3-Hydroxy-2-Methyl-5-[(Phosphonooxy) methyl]pyridin-4-Yl}methyl)amino]cyclopent-3-Ene-
1,3- Dicarboxylic acid
PDB codes:
4y0d
(A),
4zsw
(A),
4zsy
(A).
4. Ligand:
PLP-GEG × 1
PLP
=Pyridoxal-5'-Phosphate,
GEG
=(4e)-4-Aminohex-4-Enoic acid.
PDB code:
1ohy
(A).
5. Ligand:
PLP-VIG × 1
PLP
=Pyridoxal-5'-Phosphate,
VIG
=4-Amino hexanoic acid.
PDB code:
1ohw
(A).
6. Ligand:
PSZ × 1
4-[({3-Hydroxy-2-Methyl-5-[(Phosphonooxy) methyl]pyridin-4-Yl}methyl)amino]thiophene-2-
Carboxylic acid
PDB code:
4y0i
(A).
7. Ligand:
RMT × 1
(3r,4e)-4-[({3-Hydroxy-2-Methyl-5-[(Phosphonooxy) methyl]pyridin-4-Yl}methyl)imino]cyclopent-1-Ene-
1,3- Dicarboxylic acid
PDB code:
6b6g
(A).
Cluster 2 contains 7 ligand types
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Ligand
Description
1. Ligand:
PLP × 2
pyridoxal phosphate
Pyridoxal-5'-Phosphate
PDB codes:
1ohv
(A),
4y0h
(A).
2. Ligand:
ACT × 1
Acetate ion
PDB code:
1ohv
(A).
3. Ligand:
RW2 × 3
(1s)-4-[({3-Hydroxy-2-Methyl-5-[(Phosphonooxy) methyl]pyridin-4-Yl}methyl)amino]cyclopent-3-Ene-
1,3- Dicarboxylic acid
PDB codes:
4y0d
(A),
4zsw
(A),
4zsy
(A).
4. Ligand:
PLP-GEG × 1
PLP
=Pyridoxal-5'-Phosphate,
GEG
=(4e)-4-Aminohex-4-Enoic acid.
PDB code:
1ohy
(A).
5. Ligand:
PLP-VIG × 1
PLP
=Pyridoxal-5'-Phosphate,
VIG
=4-Amino hexanoic acid.
PDB code:
1ohw
(A).
6. Ligand:
PSZ × 1
4-[({3-Hydroxy-2-Methyl-5-[(Phosphonooxy) methyl]pyridin-4-Yl}methyl)amino]thiophene-2-
Carboxylic acid
PDB code:
4y0i
(A).
7. Ligand:
RMT × 1
(3r,4e)-4-[({3-Hydroxy-2-Methyl-5-[(Phosphonooxy) methyl]pyridin-4-Yl}methyl)imino]cyclopent-1-Ene-
1,3- Dicarboxylic acid
PDB code:
6b6g
(A).
Cluster 3 contains 1 ligand type
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Ligand
Description
1. Ligand:
FES × 9
Fe2/s2 (inorganic) cluster
PDB codes:
1ohv
(A),
1ohw
(A),
1ohy
(A),
4y0d
(A),
4y0h
(A),
4y0i
(A),
4zsw
(A),
4zsy
(A),
6b6g
(A).
Cluster 4 contains 1 ligand type
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Ligand
Description
1. Ligand:
ACT × 1
Acetate ion
PDB code:
6b6g
(A).
Cluster 5 contains 1 ligand type
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Ligand
Description
1. Ligand:
ACT × 1
Acetate ion
PDB code:
6b6g
(A).