Ligand clusters for UniProt code P53686

Ligand clusters for P53686: NAD-dependent protein deacetylase HST2 from Saccharomyces cerevisiae (strain ATCC 204508 / S288c)

		Top 6 (of 7) ligand clusters Cluster 1. 9 ligand types 20 ligands Cluster 2. 1 ligand type 1 ligand Cluster 3. 2 ligand types 3 ligands Cluster 4. 1 ligand type 3 ligands Cluster 5. 1 ligand type 3 ligands Cluster 6. 1 ligand type 10 ligands
Representative protein: 1szcA

Structures

PDB		Schematic diagram
1szcA
2od7A
1q1aA
2od2A
1q17A
		more ...

Cluster 1 contains 9 ligand types

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Ligand		Description
		1. Ligand: GOL × 3 glycerin Glycerol PDB codes: 1szc(A), 1szd(A), 2od2(A).
		2. Ligand: LYS-GLY-GLY-ALA-ALY-ARG-HIS-ARG × 4 ALY=N(6)-Acetyllysine. PDB codes: 1szc(A), 1szd(A), 2od7(A), 2qqf(A).
		3. Ligand: LYS-GLY-GLY-ALA-ALY-ARG-HIS × 3 ALY=N(6)-Acetyllysine. PDB codes: 2od2(A), 2od9(A), 2qqg(A).
		4. Ligand: A1R × 2 5'-O-[(S)-{[(S)-{[(2r,3r,4s)-3,4-Dihydroxypyrrolidin-2- Yl]methoxy}(hydroxy)phosphoryl]oxy}(hydroxy) phosphoryl]adenosine PDB codes: 2od7(A), 2qqf(A).
		5. Ligand: A1R-NCA × 2 A1R=5'-O-[(S)-{[(S)-{[(2r,3r,4s)-3,4-Dihydroxypyrrolidin-2- Yl]methoxy}(hydroxy)phosphoryl]oxy}(hydroxy) phosphoryl]adenosine, NCA=Nicotinamide. PDB codes: 2od9(A), 2qqg(A).
		6. Ligand: APR × 2 Adenosine-5-Diphosphoribose PDB codes: 1q17(A), 1szd(A).
		7. Ligand: CNA × 2 Carba-Nicotinamide-Adenine-Dinucleotide PDB codes: 1szc(A), 2od2(A).
		8. Ligand: LYS-GLY-GLY-ALA-ALY-ARG-HIS-ARG-LYS-ILE × 1 ALY=N(6)-Acetyllysine. PDB code: 1q1a(A).
		9. Ligand: OAD × 1 2'-O-Acetyl adenosine-5-Diphosphoribose PDB code: 1q1a(A).

Cluster 2 contains 1 ligand type

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Ligand		Description
		1. Ligand: APR × 1 Adenosine-5-Diphosphoribose PDB code: 1q17(A).

Cluster 3 contains 2 ligand types

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Ligand		Description
		1. Ligand: GOL × 2 glycerin Glycerol PDB codes: 1szc(A), 2od2(A).
_Cl		2. Metal: _CL × 1 PDB code: 1q14(A).

Cluster 4 contains 1 ligand type

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Ligand		Description
		1. Ligand: GOL × 3 glycerin Glycerol PDB codes: 1szc(A), 1szd(A), 2od2(A).

Cluster 5 contains 1 ligand type

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Ligand		Description
		1. Ligand: GOL × 3 glycerin Glycerol PDB codes: 1szc(A), 1szd(A), 2od2(A).

Cluster 6 contains 1 ligand type

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Ligand		Description
_Zn		1. Metal: _ZN × 10 PDB codes: 1q14(A), 1q17(A), 1q1a(A), 1szc(A), 1szd(A), 2od2(A), 2od7(A), 2od9(A), 2qqf(A), 2qqg(A).