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Ligand clusters for UniProt code P24297

Ligand clusters for P24297: Rubredoxin from Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1)

4 ligand clusters
Cluster 1.
2 ligand types
3 ligands
Cluster 2.
1 ligand type
1 ligand
Cluster 3.
3 ligand types
20 ligands
Cluster 4.
2 ligand types
2 ligands
Representative protein: 3kyuA  
JSmol
 

Structures

PDB   Schematic diagram
3kyuA    
3kyvA    
5nw3A    
1vcxA    
3kyxA    
 more ...

 

 Cluster 1 contains 2 ligand types

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Ligand Description


 
1. Ligand: PO4 × 2
Phosphate ion
PDB codes: 5nw3(A), 5ome(A).

_Na
 
2. Metal: _NA × 1
PDB code: 5ome(A).

 

 Cluster 2 contains 1 ligand type

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Ligand Description


 
1. Ligand: PO4 × 1
Phosphate ion
PDB code: 5ome(A).

 

 Cluster 3 contains 3 ligand types

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Ligand Description

_Fe
 
1. Metal: _FE × 18
PDB codes: 1caa(A), 1cad(A), 1iu5(A), 1vcx(A), 3kyu(A), 3kyv(A), 3kyw(A), 3kyx(A), 3kyy(A), 3ryg(A), 3rz6(A), 3rzt(A), 3ss2(A), 4ar5(A), 4ar6(A), 4k9f(A), 5nw3(A), 5ome(A).

_Zn
 
2. Metal: _ZN × 1
PDB code: 2pvx(A).

_Cd
 
3. Metal: _CD × 1
PDB code: 5ai3(A).

 

 Cluster 4 contains 2 ligand types

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Ligand Description

__K
 
1. Metal: __K × 1
PDB code: 5nw3(A).

_Na
 
2. Metal: _NA × 1
PDB code: 5nw3(A).

 

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