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EBI
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PDBsum
Ligand clusters for UniProt code P21953
Ligand clusters for P21953: 2-oxoisovalerate dehydrogenase subunit beta, mitochondrial from Homo sapiens
Top 6 (of 9) ligand clusters
Cluster 1.
2 ligand types
3 ligands
Cluster 2.
2 ligand types
3 ligands
Cluster 3.
1 ligand type
23 ligands
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
5 ligands
Cluster 6.
1 ligand type
1 ligand
Representative protein: 1olsB
Structures
PDB
Schematic diagram
1ols
B
2beu
B
1v1m
B
1olx
B
1x7x
B
more ...
Cluster 1 contains 2 ligand types
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Ligand
Description
1. Ligand:
THV × 1
C2-1-Hydroxy-3-Methyl-Propyl-Thiamin diphosphate
PDB code:
2j9f
(B).
_Cl
2. Metal:
_CL × 2
PDB codes:
1v11
(B),
1v16
(B).
Cluster 2 contains 2 ligand types
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Ligand
Description
1. Ligand:
MRD × 2
(4r)-2-Methylpentane-2,4-Diol
PDB codes:
2bfb
(B),
2bfe
(B).
2. Ligand:
MPD × 1
(4s)-2-Methyl-2,4-Pentanediol
PDB code:
2bfd
(B).
Cluster 3 contains 1 ligand type
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Ligand
Description
1. Ligand:
GOL × 23
glycerin
Glycerol
PDB codes:
1ols
(B),
1olu
(B),
1olx
(B),
1u5b
(B),
1v11
(B),
1v16
(B),
1v1m
(B),
1v1r
(B),
1wci
(B),
1x7w
(B),
1x7x
(B),
1x7y
(B),
1x7z
(B),
1x80
(B),
2beu
(B),
2bev
(B),
2bew
(B),
2bfb
(B),
2bfc
(B),
2bfd
(B),
2bfe
(B),
2bff
(B),
2j9f
(B).
Cluster 4 contains 1 ligand type
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Ligand
Description
1. Ligand:
GOL × 1
glycerin
Glycerol
PDB code:
1olu
(B).
Cluster 5 contains 1 ligand type
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Ligand
Description
1. Ligand:
GOL × 5
glycerin
Glycerol
PDB codes:
1olu
(B),
1v11
(B),
1v16
(B),
1v1m
(B),
1v1r
(B).
Cluster 6 contains 1 ligand type
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Ligand
Description
1. Ligand:
GOL × 1
glycerin
Glycerol
PDB code:
1olx
(B).