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Ligand clusters for UniProt code P21816
Ligand clusters for P21816: Cysteine dioxygenase type 1 from Rattus norvegicus
Top 6 (of 12) ligand clusters
Cluster 1.
12 ligand types
88 ligands
Cluster 2.
1 ligand type
1 ligand
Cluster 3.
1 ligand type
2 ligands
Cluster 4.
1 ligand type
3 ligands
Cluster 5.
1 ligand type
2 ligands
Cluster 6.
1 ligand type
2 ligands
Representative protein: 3elnA
Structures
PDB
Schematic diagram
3eln
A
4iep
A
4xez
A
4piy
A
4xet
A
more ...
Cluster 1 contains 12 ligand types
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Ligand
Description
_Fe
1. Metal:
_FE × 26
PDB codes:
2gh2
(A),
4ies
(A),
4pix
(A),
4piy
(A),
4piz
(A),
4pjy
(A),
4xet
(A),
4xez
(A),
4xf0
(A),
4xf1
(A),
4xf3
(A),
4xf4
(A),
4xf9
(A),
4xfa
(A),
4xfb
(A),
4xfc
(A),
4xff
(A),
4xfg
(A),
4xfh
(A),
4xfi
(A),
5i0s
(A),
5i0t
(A),
5i0u
(A),
6u1m
(A),
6u4s
(A),
6u4v
(A).
2. Ligand:
CYS × 9
cysteine
PDB codes:
4iev
(A),
4iew
(A),
4jto
(A),
4xf0
(A),
4xf1
(A),
4xf3
(A),
4xfg
(A),
4xfh
(A),
4z82
(A).
3. Ligand:
SIN × 1
succinic acid
Succinic acid
PDB code:
4yni
(A).
Fe2
4. Metal:
FE2 × 24
PDB codes:
3eln
(A),
4ieo
(A),
4iep
(A),
4ieq
(A),
4ier
(A),
4iet
(A),
4ieu
(A),
4iev
(A),
4iew
(A),
4iex
(A),
4iey
(A),
4iez
(A),
4jtn
(A),
4jto
(A),
4kwj
(A),
4kwk
(A),
4kwl
(A),
4ubg
(A),
4ubh
(A),
4ysf
(A),
4yyo
(A),
4z82
(A),
5efu
(A),
5ezw
(A).
_Cl
5. Metal:
_CL × 7
PDB codes:
4pix
(A),
4xf0
(A),
4xfb
(A),
4xfc
(A),
4xff
(A),
4xfg
(A),
4yyo
(A).
6. Ligand:
2CO × 6
S-Hydroperoxycysteine
PDB codes:
3eln
(A),
4ier
(A),
4ies
(A),
4iet
(A),
4ieu
(A),
4iey
(A).
7. Ligand:
HCS × 6
2-Amino-4-Mercapto-Butyric acid
PDB codes:
4piy
(A),
4piz
(A),
4xf4
(A),
4xf9
(A),
4xfa
(A),
4xfi
(A).
8. Ligand:
THJ × 5
Thiosulfate
PDB codes:
4xez
(A),
4xff
(A),
5ezw
(A),
5i0s
(A),
5i0t
(A).
9. Ligand:
3SS × 1
3-Disulfanylpropanoic acid
PDB code:
4kwl
(A).
10. Ligand:
ACT × 1
Acetate ion
PDB code:
6u4l
(A).
11. Ligand:
CSS × 1
S-Mercaptocysteine
PDB code:
4kwk
(A).
12. Ligand:
DCY × 1
D-Cysteine
PDB code:
5i0u
(A).
Cluster 2 contains 1 ligand type
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Ligand
Description
1. Ligand:
SO4 × 1
Sulfate ion
PDB code:
2gh2
(A).
Cluster 3 contains 1 ligand type
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Ligand
Description
_Na
1. Metal:
_NA × 2
PDB codes:
4ubg
(A),
4ubh
(A).
Cluster 4 contains 1 ligand type
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Ligand
Description
_Na
1. Metal:
_NA × 3
PDB codes:
4ubg
(A),
4ubh
(A),
4yni
(A).
Cluster 5 contains 1 ligand type
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Ligand
Description
_Na
1. Metal:
_NA × 2
PDB codes:
4ubg
(A),
4ubh
(A).
Cluster 6 contains 1 ligand type
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Ligand
Description
_Na
1. Metal:
_NA × 2
PDB codes:
4ubg
(A),
4ubh
(A).