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EBI
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Structure Databases
PDBsum
Ligand clusters for UniProt code P14061
Ligand clusters for P14061: Estradiol 17-beta-dehydrogenase 1 from Homo sapiens
Top 6 (of 10) ligand clusters
Cluster 1.
21 ligand types
39 ligands
Cluster 2.
4 ligand types
11 ligands
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
2 ligands
Cluster 6.
1 ligand type
1 ligand
Representative protein: 1a27A
Structures
PDB
Schematic diagram
1a27
A
1i5r
A
1fdu
A
1fdv
A
3dhe
A
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Cluster 1 contains 21 ligand types (of which only 20 are listed. Click
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Ligand
Description
1. Ligand:
NAP × 7
Nadp nicotinamide-Adenine-Dinucleotide phosphate
PDB codes:
1a27
(A),
1equ
(A),
1fdt
(A),
1fdu
(A),
1qyv
(A),
1qyw
(A),
1qyx
(A).
2. Ligand:
EQI × 1
Equilin
PDB code:
1equ
(A).
3. Ligand:
NAD × 1
Nicotinamide-Adenine-Dinucleotide
PDB code:
1fdv
(A).
4. Ligand:
EST × 6
estradiol
Estradiol
PDB codes:
1a27
(A),
1fds
(A),
1fdt
(A),
1fdu
(A),
1fdw
(A),
1iol
(A).
5. Ligand:
GOL × 2
glycerin
Glycerol
PDB codes:
1i5r
(A),
6dtp
(A).
6. Ligand:
AND × 1
prasterone
3-Beta-Hydroxy-5-Androsten-17-One
PDB code:
3dhe
(A).
7. Ligand:
J3Z × 1
estrone
(9beta,13alpha)-3-Hydroxyestra-1,3,5(10)-Trien-17-One
PDB code:
6mne
(A).
8. Ligand:
TES × 1
testosterone
Testosterone
PDB code:
1jtv
(A).
9. Ligand:
DHT × 1
5-Alpha-Dihydrotestosterone
PDB code:
1dht
(A).
10. Ligand:
5SD × 1
5alpha-Androstan-3,17-Dione
PDB code:
1qyw
(A).
11. Ligand:
ASD × 1
4-Androstene-3-17-Dione
PDB code:
1qyx
(A).
12. Ligand:
HYC × 1
O5'-[9-(3,17b-Dihydroxy-1,3,5(10)-Estratrien-16b-Yl)- Nonanoyl]adenosine
PDB code:
1i5r
(A).
13. Ligand:
NAP × 5
Nadp nicotinamide-Adenine-Dinucleotide phosphate
PDB codes:
3hb5
(X),
3km0
(A),
6cgc
(A),
6cge
(A),
6mne
(A).
14. Ligand:
DHT × 2
5-Alpha-Dihydrotestosterone
PDB codes:
3dey
(X),
3klm
(X).
15. Ligand:
E2B × 2
3-{[(9beta,14beta,16alpha,17alpha)-3,17-Dihydroxyestra- 1,3,5(10)-Trien-16-Yl]methyl}benzamide
PDB codes:
3hb4
(X),
3hb5
(X).
16. Ligand:
AOM × 1
5-Alpha-Androstane-3-Beta,17beta-Diol
PDB code:
3km0
(A).
17. Ligand:
B81 × 1
(3alpha,8alpha,17beta)-Androst-5-Ene-3,17-Diol
PDB code:
3klp
(X).
18. Ligand:
EM9 × 1
N-Butyl-11-[(7alpha,9beta,13alpha,14beta,16alpha, 17alpha)-16-Chloro-3,17-Dihydroxyestra-1,3,5(10)-
Trien-7-Yl]-N-Methylundecanamide
PDB code:
6dtp
(A).
19. Ligand:
F0A × 1
3-{[(9beta,14beta,16alpha,17alpha)-3,17-Dihydroxy-2- Methoxyestra-1,3,5(10)-Trien-16-
Yl]methyl}benzamide
PDB code:
6cgc
(A).
20. Ligand:
F0D × 1
3-{[(14beta,16alpha,17alpha)-3-(2-Bromoethyl)-17- Hydroxyestra-1,3,5(10)-Trien-16-
Yl]methyl}benzamide
PDB code:
6cge
(A).
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Cluster 2 contains 4 ligand types
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Ligand
Description
1. Ligand:
GOL × 8
glycerin
Glycerol
PDB codes:
1i5r
(A),
1jtv
(A),
1qyv
(A),
1qyw
(A),
1qyx
(A),
6dtp
(A),
2. Ligand:
EDO × 1
1,2-Ethanediol
PDB code:
6dtp
(A).
3. Ligand:
PEG × 1
Di(hydroxyethyl)ether
PDB code:
6mnc
(A).
4. Ligand:
SO4 × 1
Sulfate ion
PDB code:
1fdt
(A).
Cluster 3 contains 1 ligand type
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Ligand
Description
1. Ligand:
PGE × 1
Triethylene glycol
PDB code:
6dtp
(A).
Cluster 4 contains 1 ligand type
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Ligand
Description
1. Ligand:
PEG × 1
Di(hydroxyethyl)ether
PDB code:
6dtp
(A).
Cluster 5 contains 1 ligand type
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Ligand
Description
1. Ligand:
GOL × 2
glycerin
Glycerol
PDB codes:
3dey
(X),
3klm
(X).
Cluster 6 contains 1 ligand type
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Ligand
Description
1. Ligand:
GOL × 1
glycerin
Glycerol
PDB code:
6dtp
(A).