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EBI
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PDBsum
Ligand clusters for UniProt code P13280
Ligand clusters for P13280: Glycogenin-1 from Oryctolagus cuniculus
5 ligand clusters
Cluster 1.
5 ligand types
12 ligands
Cluster 2.
1 ligand type
3 ligands
Cluster 3.
1 ligand type
6 ligands
Cluster 4.
1 ligand type
4 ligands
Cluster 5.
1 ligand type
4 ligands
Representative protein: 1ll3A
Structures
PDB
Schematic diagram
1ll3
A
3usr
A
3v91
A
3v90
A
3v8y
A
more ...
Cluster 1 contains 5 ligand types
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Ligand
Description
1. Ligand:
UPG × 3
Uridine-5'-Diphosphate-Glucose
PDB codes:
1ll2
(A),
1zdf
(A),
1zdg
(A).
2. Ligand:
UDP × 1
Uridine-5'-Diphosphate
PDB code:
1zct
(A).
_Mn
3. Metal:
_MN × 6
PDB codes:
1ll2
(A),
1zct
(A),
1zdf
(A),
1zdg
(A),
3v8z
(A),
3v91
(A).
4. Ligand:
UPG × 1
Uridine-5'-Diphosphate-Glucose
PDB code:
3v91
(A).
5. Ligand:
UDP × 1
Uridine-5'-Diphosphate
PDB code:
3v8z
(A).
Cluster 2 contains 1 ligand type
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Ligand
Description
1. Ligand:
GOL × 3
glycerin
Glycerol
PDB codes:
1ll3
(A),
3usq
(A),
3usr
(A).
Cluster 3 contains 1 ligand type
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Ligand
Description
1. Ligand:
GOL × 6
glycerin
Glycerol
PDB codes:
1ll3
(A),
3usr
(A),
3v8y
(A),
3v8z
(A),
3v90
(A),
3v91
(A).
Cluster 4 contains 1 ligand type
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Ligand
Description
1. Ligand:
GOL × 4
glycerin
Glycerol
PDB codes:
3usq
(A),
3v8y
(A),
3v8z
(A),
3v90
(A).
Cluster 5 contains 1 ligand type
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Ligand
Description
_Cl
1. Metal:
_CL × 4
PDB codes:
3usq
(A),
3usr
(A),
3v90
(A),
3v91
(A).