Ligand clusters for UniProt code P0DTC2

Ligand clusters for P0DTC2: Spike glycoprotein from Severe acute respiratory syndrome coronavirus 2

		Top 6 (of 42) ligand clusters Cluster 1. 28 ligand types 352 ligands Cluster 2. 24 ligand types 193 ligands Cluster 3. 11 ligand types 517 ligands Cluster 4. 8 ligand types 793 ligands Cluster 5. 6 ligand types 199 ligands Cluster 6. 7 ligand types 273 ligands
Representative protein: 7cn8A

Structures

PDB		Schematic diagram
7cn8A
7krqA
7bnnA
7lxzA
7l2dA
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Cluster 1 contains 28 ligand types (of which only 20 are listed. Click for all)

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Ligand		Description
		1. Ligand: NAG × 203 n-acetylglucosamine 2-Acetamido-2-Deoxy-Beta-D-Glucopyranose PDB codes: 6lzg(B), 6m0j(E), 6vsb(A), 6vxx(A), 6vyb(A), 6w41(C), 6x6p(A), 6x79(A), 6xc2(A), 6xc4(A), 6xcm(A), 6xe1(E), 6xf5(A), 6xf6(A), 6xkp(A), 6xkq(A), 6xlu(A), 6xm0(A), 6xm3(A), 6xm4(A), 6xm5(A), 6yla(E), 6yz5(E), 6z2m(A), 6z43(A), 6zb4(C), 6zb5(C), 6zcz(E), 6zdg(E), 6zer(E), 6zfo(E), 6zge(A), 6zgf(A), 6zgi(A), 6zhd(A), 6zow(C), 6zox(A), 6zoy(A), 6zoz(A), 6zp0(A), 6zp1(A), 6zp2(A), 6zp5(A), 6zp7(A), 7a25(A), 7a29(A), 7a91(A), 7a92(A), 7a94(A), 7b14(A), 7b17(A), 7b18(A), 7bbh(A), 7bel(R), 7beo(R), 7bnn(A), 7bwj(E), 7byr(B), 7bz5(A), 7c01(A), 7c2l(A), 7c8v(B), 7cab(A), 7cac(A), 7cai(A), 7cak(A), 7cdi(E), 7cdj(E), 7chh(A), 7cho(E), 7chp(E), 7chs(E), 7cjf(C), 7cn4(A), 7cn8(A), 7deo(B), 7det(A), 7deu(A), 7df3(A), 7df4(C), 7dx4(E), 7e23(A), 7e3j(B), 7e7b(A), 7e7d(A), 7e8m(E), 7eam(A), 7ean(A), 7jmo(A), 7jmp(A), 7jv4(A), 7jv6(A), 7jwy(A), 7jx3(R), 7jzl(A), 7jzn(A), 7k8m(E), 7k8t(A), 7k8v(A), 7k8w(A), 7k8x(A), 7k9z(E), 7kdg(A), 7kdh(A), 7kdi(A), 7kdj(A), 7kdk(A), 7kdl(A), 7ke4(A), 7ke6(A), 7ke7(A), 7ke8(A), 7ke9(A), 7kea(A), 7keb(A), 7kec(A), 7kfv(A), 7kfw(A), 7kfx(A), 7kfy(A), 7kj2(A), 7kj3(A), 7kj4(A), 7kj5(A), 7klg(B), 7klh(B), 7kmh(C), 7kmi(C), 7kmk(A), 7kms(A), 7kn6(A), 7kn7(A), 7krq(A), 7krr(B), 7krs(A), 7ks9(A), 7ksg(A), 7kxj(A), 7kxk(A), 7l02(A), 7l09(A), 7l2d(A), 7l2e(A), 7l2f(A), 7l3n(B), 7l58(A), 7ldj(D), 7lo4(B), 7lop(Z), 7lqv(A), 7lqw(B), 7ls9(A), 7lss(B), 7lwm(A), 7lwo(A), 7lwt(A), 7lwu(A), 7lyl(A), 7lym(A), 7lyo(A), 7lyq(A), 7m3i(C), 7m6e(A), 7m6h(A), 7m6i(A), 7m71(A), 7m7b(A), 7m7w(S), 7m8k(A), 7mf1(A), 7mjg(A), 7mjh(A), 7mji(B), 7mjj(A), 7mjk(A), 7mjl(A), 7mjm(A), 7mjn(B), 7mkl(A), 7mkm(A), 7mmo(C), 7nd3(A), 7nd5(A), 7nd6(A), 7nd8(A), 7nd9(A), 7nda(A), 7ndb(A), 7nt9(A), 7nta(B), 7ntc(A), 7nx6(E), 7nx7(E), 7nx8(E), 7nx9(E), 7nxa(E), 7nxb(E), 7nxc(B).
		2. Ligand: GOL × 21 glycerin Glycerol PDB codes: 7beh(E), 7bej(E), 7bek(E), 7bel(R), 7bem(E), 7c8v(B), 7c8w(B), 7can(B), 7d2z(B), 7d30(B), 7kmh(C), 7kmi(C), 7nx6(E), 7nx7(E), 7nx8(E), 7nx9(E), 7nxa(E), 7nxb(E).
		3. Ligand: DMS × 8 dimethyl sulfoxide Dimethyl sulfoxide PDB codes: 6yla(E), 6zow(a), 6zp5(A), 6zp7(A),
		4. Ligand: EIC × 6 linoleic acid Linoleic acid PDB codes: 6zb4(C), 6zb5(C), 6zp2(A), 7cn8(A), 7dwy(A), 7jji(A).
		5. Ligand: ELA × 2 oleic acid 9-Octadecenoic acid PDB codes: 7e7b(A), 7e7d(A).
		6. Ligand: NAG-NAG × 49 NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose. PDB codes: 6xc3(C), 6xcn(A), 6xkl(A), 7a5r(A), 7a5s(A), 7akd(A), 7b3o(E), 7chb(R), 7cn8(A), 7ct5(A), 7czp(A), 7czq(A), 7czr(A), 7czs(A), 7czt(A), 7czu(A), 7czv(A), 7czw(A), 7czx(A), 7czy(A), 7czz(A), 7d00(A), 7d03(A), 7d0b(A), 7d0c(A), 7d0d(A), 7dwy(A), 7dwz(A), 7dx0(A), 7dx1(A), 7dx2(A), 7dx3(A), 7dx5(A), 7dx6(A), 7dx7(A), 7dx8(A), 7dx9(A), 7jji(A), 7jmw(A), 7k45(B), 7k4n(A), 7kmb(G), 7kmz(C), 7kn5(A), 7knb(C), 7kne(C), 7knh(C), 7m6f(A), 7m6g(A).
		7. Ligand: NAG-NAG-FUC × 12 NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose, FUC=Alpha-L-Fucopyranose. PDB codes: 7beh(E), 7bei(E), 7bej(E), 7bek(E), 7bem(E), 7can(B), 7dpm(C), 7jzm(B), 7jzu(B), 7kzb(C), 7neg(E), 7neh(E).
		8. Ligand: EDO × 11 1,2-Ethanediol PDB codes: 6yz5(E), 7kn5(A), 7lm8(A), 7neh(E),
		9. Ligand: NAG-NAG-BMA × 11 NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose, BMA=Beta-D-Mannopyranose. PDB codes: 6vw1(E), 6xc7(A), 6xey(A), 6zp5(C), 6zp7(B), 7dmu(B), 7jva(A), 7jvc(A), 7jw0(A), 7kml(A), 7ld1(A).
		10. Ligand: NAG-NAG-BMA-FUC × 6 NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose, BMA=Beta-D-Mannopyranose, FUC=Alpha-L-Fucopyranose. PDB codes: 6wpt(A), 7k43(A), 7lm8(A), 7lxy(A), 7lxz(A), 7ly2(A).
		11. Ligand: NAG-NAG-BMA-MAN-MAN-FUC × 4 NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose, BMA=Beta-D-Mannopyranose, MAN=Alpha-D-Mannopyranose, FUC=Alpha-L-Fucopyranose. PDB codes: 6wps(A), 7bep(E), 7k8z(A), 7l0n(R).
		12. Ligand: PRO × 3 PDB codes: 7bem(E), 7kmh(C).
		13. Ligand: 1PE × 1 Pentaethylene glycol PDB code: 7d30(B).
		14. Ligand: ACT × 1 Acetate ion PDB code: 7d2z(B).
		15. Ligand: CAC × 1 Cacodylate ion PDB code: 7jvb(A).
		16. Ligand: IMD × 1 Imidazole PDB code: 7bep(E).
		17. Ligand: NAG-FUC × 1 NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose, FUC=Alpha-L-Fucopyranose. PDB code: 6zgf(A).
		18. Ligand: NAG-FUC-NAG-FUC × 1 NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose, FUC=Alpha-L-Fucopyranose. PDB code: 7c8w(B).
		19. Ligand: NAG-NAG-BMA-FUL × 1 NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose, BMA=Beta-D-Mannopyranose, FUL=Beta-L-Fucopyranose. PDB code: 7ldj(B).
		20. Ligand: NAG-NAG-BMA-MAN × 1 NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose, BMA=Beta-D-Mannopyranose, MAN=Alpha-D-Mannopyranose. PDB code: 6xdg(E).
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Cluster 2 contains 24 ligand types (of which only 20 are listed. Click for all)

Selection shortcuts: select all/none invert selection.
Ligand		Description
		1. Ligand: NAG × 47 n-acetylglucosamine 2-Acetamido-2-Deoxy-Beta-D-Glucopyranose PDB codes: 6wps(A), 6x6p(A), 6xf5(A), 6z43(A), 6zb4(C), 6zb5(C), 6zow(a), 6zox(A), 6zoy(A), 6zoz(A), 6zp0(A), 6zp2(A), 6zp5(A), 6zp7(A), 7bbh(A), 7byr(B), 7cn4(A), 7czv(A), 7df4(C), 7dwy(A), 7dx3(A), 7jv6(A), 7jzl(A), 7k8t(A), 7ke4(A), 7ke6(A), 7ke8(A), 7kea(A), 7kj3(A), 7kl9(A), 7kml(A), 7knb(C), 7ksg(A), 7l2f(A), 7lwj(A), 7lwq(A), 7lww(A), 7lyl(A), 7lym(A), 7m6h(A), 7nd8(A), 7nd9(A), 7ndb(A).
		2. Ligand: GOL × 17 glycerin Glycerol PDB codes: 7ben(E), 7bep(E), 7c8v(B), 7d2z(B), 7d30(B), 7neg(E), 7nx7(E), 7nx8(E), 7nx9(E), 7nxb(E).
		3. Ligand: EIC × 5 linoleic acid Linoleic acid PDB codes: 6zb5(C), 6zp2(A), 7cn8(A), 7dwy(A), 7jji(A).
		4. Ligand: DMS × 2 dimethyl sulfoxide Dimethyl sulfoxide PDB codes: 6yla(E),
		5. Ligand: ELA × 2 oleic acid 9-Octadecenoic acid PDB codes: 7e7b(A), 7e7d(A).
		6. Ligand: CIT × 1 citric acid Citric acid PDB code: 7nx7(E).
		7. Ligand: TRS × 1 tromethamine 2-Amino-2-Hydroxymethyl-Propane-1,3-Diol PDB code: 7bek(E).
		8. Ligand: VCG × 1 polysorbate 80 2-Hydroxyethyl 2-Deoxy-3,5-Bis-O-(2-Hydroxyethyl)-6-O- (2-{[(9e)-Octadec-9-Enoyl]oxy}ethyl)-Alpha- L-Xylo- Hexofuranoside PDB code: 7e7b(A).
		9. Ligand: NAG-NAG × 48 NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose. PDB codes: 6vxx(A), 6xlu(A), 6zge(A), 6zgf(A), 6zgi(A), 6zox(A), 6zoz(A), 6zp2(A), 6zp5(C), 6zp7(B), 7bbh(A), 7cab(A), 7cac(A), 7cn4(A), 7cn8(A), 7df3(A), 7e7b(A), 7e7d(A), 7jji(A), 7jwy(A), 7jzl(A), 7kdg(A), 7kdi(A), 7kdk(A), 7ke4(A), 7ke8(A), 7knb(C), 7krr(B), 7krs(A), 7l2d(A), 7l2e(A), 7l2f(A), 7ls9(A), 7mkl(A), 7nd7(A), 7nd8(A), 7nda(A).
		10. Ligand: SO4 × 28 Sulfate ion PDB codes: 6xkp(A), 7bek(E), 7neg(E), 7nx6(E), 7nx7(E), 7nx8(E), 7nx9(E), 7nxa(E), 7nxb(E),
		11. Ligand: EDO × 14 1,2-Ethanediol PDB codes: 6yz5(E), 7kn5(A), 7lm8(A), 7neh(E),
		12. Ligand: ACT × 9 Acetate ion PDB codes: 6yz5(E), 7beo(R), 7d2z(B), 7d30(B),
		13. Ligand: PEG × 4 Di(hydroxyethyl)ether PDB codes: 7bek(E), 7nx8(E), 7nxa(E),
		14. Ligand: NAG-NAG-BMA × 3 NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose, BMA=Beta-D-Mannopyranose. PDB codes: 6vw1(E), 7byr(B), 7l2d(A).
		15. Ligand: PRO × 2 PDB codes: 7bem(E),
		16. Ligand: BU2 × 1 1,3-Butanediol PDB code: 7d30(B).
		17. Ligand: CAC × 1 Cacodylate ion PDB code: 7jvb(A).
		18. Ligand: IMD × 1 Imidazole PDB code: 7ben(E).
		19. Ligand: MLI × 1 Malonate ion PDB code: 6yla(E).
		20. Ligand: NAG-FUC × 1 NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose, FUC=Alpha-L-Fucopyranose. PDB code: 6zgf(A).
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Cluster 3 contains 11 ligand types

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Ligand		Description
		1. Ligand: NAG × 369 n-acetylglucosamine 2-Acetamido-2-Deoxy-Beta-D-Glucopyranose PDB codes: 6vsb(A), 6vxx(A), 6vyb(A), 6wps(A), 6wpt(A), 6x6p(A), 6x79(A), 6xcm(A), 6xcn(A), 6xey(A), 6xf5(A), 6xf6(A), 6xkl(A), 6xlu(A), 6xm0(A), 6xm3(A), 6xm4(A), 6xm5(A), 6z43(A), 6zb4(C), 6zb5(C), 6zge(A), 6zgi(A), 6zhd(A), 6zow(C), 6zox(A), 6zoy(A), 6zoz(A), 6zp0(A), 6zp1(A), 6zp2(A), 6zp5(A), 6zp7(A), 7a25(A), 7a29(A), 7a94(A), 7akd(A), 7b62(A), 7bbh(A), 7bnn(A), 7bno(A), 7byr(A), 7c2l(A), 7cab(A), 7cac(A), 7cai(A), 7cak(A), 7chh(A), 7cn8(A), 7cn9(A), 7ct5(A), 7cwl(A), 7czp(A), 7czq(A), 7czr(A), 7czs(A), 7czt(A), 7czu(A), 7czv(A), 7czw(A), 7czx(A), 7czy(A), 7czz(A), 7d00(A), 7d03(A), 7d0b(A), 7d0c(A), 7d0d(A), 7df3(A), 7df4(C), 7dwy(A), 7dwz(A), 7dx0(A), 7dx1(A), 7dx2(A), 7dx3(A), 7dx5(A), 7dx6(A), 7dx7(A), 7dx8(A), 7dx9(A), 7jv4(A), 7jv6(A), 7jvc(A), 7jw0(A), 7jwy(A), 7jzl(A), 7jzn(A), 7k43(A), 7k4n(A), 7k8s(A), 7k8t(A), 7k8v(A), 7k8w(A), 7k8x(A), 7k8z(A), 7k90(A), 7kdg(A), 7kdh(A), 7kdi(A), 7kdj(A), 7kdk(A), 7kdl(A), 7ke4(A), 7ke6(A), 7ke7(A), 7ke8(A), 7ke9(A), 7kea(A), 7keb(A), 7kec(A), 7kj2(A), 7kj3(A), 7kj4(A), 7kj5(A), 7kml(A), 7kms(A), 7kmz(C), 7knb(C), 7kne(C), 7knh(C), 7kni(A), 7krq(A), 7krr(B), 7krs(A), 7ks9(A), 7ksg(A), 7l02(A), 7l09(A), 7l2c(A), 7l2d(A), 7l2e(A), 7l2f(A), 7ld1(A), 7lqv(A), 7lqw(B), 7lss(B), 7lwi(A), 7lwj(A), 7lwk(A), 7lwl(A), 7lwm(A), 7lwn(A), 7lwp(A), 7lwq(A), 7lwt(A), 7lwu(A), 7lwv(A), 7lww(A), 7lxx(A), 7lxy(A), 7lxz(A), 7ly0(A), 7ly2(A), 7ly3(A), 7lyn(A), 7lyo(A), 7lyq(A), 7m6e(A), 7m6f(A), 7m6g(A), 7m6h(A), 7m6i(A), 7m8k(A), 7mjg(A), 7mjh(A), 7mjj(A), 7mjk(A), 7mjm(A), 7mkl(A), 7nd4(A), 7nd7(A), 7nd8(A), 7nd9(B), 7nda(A), 7ndc(A), 7ndd(A), 7nt9(A), 7ntc(A).
		2. Ligand: VCG × 2 polysorbate 80 2-Hydroxyethyl 2-Deoxy-3,5-Bis-O-(2-Hydroxyethyl)-6-O- (2-{[(9e)-Octadec-9-Enoyl]oxy}ethyl)-Alpha- L-Xylo- Hexofuranoside PDB codes: 7e7b(A), 7jji(A).
		3. Ligand: NAG-NAG × 127 NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose. PDB codes: 6vxx(A), 6vyb(A), 6x79(A), 6xf6(A), 6xlu(A), 6xm0(A), 6xm3(A), 6xm4(A), 6xm5(A), 6z43(A), 6zge(A), 6zgf(A), 6zgi(A), 6zhd(A), 6zow(C), 6zox(A), 6zoz(A), 6zp1(A), 6zp2(A), 6zp5(C), 6zp7(B), 7a25(A), 7a29(A), 7akd(A), 7bbh(A), 7c2l(A), 7cab(A), 7cac(A), 7cai(A), 7cak(A), 7cn4(A), 7cn8(A), 7cn9(A), 7cwm(A), 7cwn(A), 7cws(O), 7cwu(B), 7df3(A), 7e7b(A), 7e7d(A), 7jji(A), 7jwy(A), 7k43(A), 7k8s(A), 7k8t(A), 7k8v(A), 7k8w(A), 7k8z(A), 7kdg(A), 7kdi(A), 7kdj(A), 7kdk(A), 7kdl(A), 7ke4(A), 7ke6(A), 7ke7(A), 7ke8(A), 7ke9(A), 7kea(A), 7keb(A), 7kec(A), 7kj2(A), 7kj5(A), 7kmk(A), 7kml(A), 7krq(A), 7krr(B), 7krs(A), 7ks9(A), 7l2d(A), 7l2e(A), 7l2f(A), 7ls9(A), 7lxz(A), 7mkl(A), 7nd3(A), 7nd4(A), 7nd5(A), 7nd6(A), 7nd7(A), 7nd8(A), 7nd9(A), 7nda(A), 7ndb(A), 7ndc(A), 7ndd(A), 7nt9(A), 7nta(B), 7ntc(A),
		4. Ligand: BLA × 4 Biliverdine IX alpha PDB codes: 7b62(A), 7nt9(A), 7nta(B), 7ntc(A).
		5. Ligand: NAG-NAG-BMA × 3 NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose, BMA=Beta-D-Mannopyranose. PDB codes: 7l2d(A), 7l2f(A), 7ls9(A).
		6. Ligand: PGE × 3 Triethylene glycol PDB codes: 7b62(A),
		7. Ligand: NAG-FUC × 2 NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose, FUC=Alpha-L-Fucopyranose. PDB codes: 7lxw(A), 7ly3(A).
		8. Ligand: NAG-NAG-MAN × 2 NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose, MAN=Alpha-D-Mannopyranose. PDB codes: 7krq(A),
		9. Ligand: NAG-NAG-NAG × 2 NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose. PDB codes: 7c2l(A),
		10. Ligand: PEG × 2 Di(hydroxyethyl)ether PDB codes: 7b62(A),
		11. Ligand: NAG-NAG-BMA-FUC × 1 NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose, BMA=Beta-D-Mannopyranose, FUC=Alpha-L-Fucopyranose. PDB code: 7ly3(A).

Cluster 4 contains 8 ligand types

Selection shortcuts: select all/none invert selection.
Ligand		Description
		1. Ligand: NAG × 429 n-acetylglucosamine 2-Acetamido-2-Deoxy-Beta-D-Glucopyranose PDB codes: 6vsb(A), 6vxx(A), 6vyb(A), 6wps(A), 6wpt(A), 6x6p(A), 6x79(A), 6xcm(A), 6xcn(A), 6xey(A), 6xf5(A), 6xf6(A), 6xkl(A), 6xlu(A), 6xm0(A), 6xm3(A), 6xm4(A), 6xm5(A), 6xra(C), 6z43(A), 6zb4(C), 6zb5(C), 6zge(A), 6zgf(A), 6zgi(A), 6zhd(A), 6zox(A), 6zoy(A), 6zoz(A), 6zp0(A), 6zp1(A), 6zp2(A), 7a25(A), 7a29(A), 7a4n(A), 7a94(A), 7ad1(A), 7akd(A), 7b18(A), 7bbh(A), 7bnn(A), 7bno(A), 7byr(A), 7c2l(A), 7cab(A), 7cac(A), 7cai(A), 7cak(A), 7chh(A), 7cn4(A), 7cn8(A), 7cn9(A), 7ct5(A), 7cwl(A), 7cwm(A), 7cwn(A), 7cws(O), 7cwu(B), 7czp(A), 7czq(A), 7czr(A), 7czs(A), 7czt(A), 7czu(A), 7czv(A), 7czw(A), 7czx(A), 7czy(A), 7czz(A), 7d00(A), 7d03(A), 7d0b(A), 7d0c(A), 7df3(A), 7dwy(A), 7dwz(A), 7dx0(A), 7dx1(A), 7dx2(A), 7dx3(A), 7dx5(A), 7dx6(A), 7dx7(A), 7dx8(A), 7jv4(A), 7jv6(A), 7jvc(A), 7jw0(A), 7jwy(A), 7jzl(A), 7jzn(A), 7k43(A), 7k4n(A), 7k8s(A), 7k8t(A), 7k8v(A), 7k8w(A), 7k8x(A), 7k8y(B), 7k8z(A), 7k90(A), 7kdg(A), 7kdh(A), 7kdi(A), 7kdj(A), 7kdk(A), 7kdl(A), 7ke4(A), 7ke6(A), 7ke7(A), 7ke8(A), 7ke9(A), 7kea(A), 7keb(A), 7kec(A), 7kj2(A), 7kj3(A), 7kj4(A), 7kj5(A), 7kl9(A), 7kmk(A), 7kml(A), 7kms(A), 7kmz(C), 7knb(C), 7kne(C), 7knh(C), 7kni(A), 7krq(A), 7krr(B), 7krs(A), 7ks9(A), 7ksg(A), 7kxk(A), 7l02(A), 7l09(A), 7l2d(A), 7l2e(A), 7l2f(A), 7l3n(B), 7l56(A), 7l57(A), 7l58(A), 7ld1(A), 7lqv(A), 7lqw(B), 7ls9(A), 7lss(B), 7lwi(A), 7lwj(A), 7lwk(A), 7lwl(A), 7lwm(A), 7lwn(A), 7lwo(A), 7lwp(A), 7lwq(A), 7lwt(A), 7lwu(A), 7lwv(A), 7lww(A), 7lxy(A), 7lxz(A), 7ly2(A), 7lyk(A), 7lyl(A), 7lym(A), 7lyn(A), 7lyo(A), 7lyp(A), 7lyq(A), 7m6e(A), 7m6f(A), 7m6g(A), 7m6h(A), 7m6i(A), 7m8k(A), 7mjg(A), 7mjh(A), 7mjj(A), 7mjk(A), 7mjm(A), 7mkl(A), 7nd3(A), 7nd4(A), 7nd5(A), 7nd6(A), 7nd7(A), 7nd8(A), 7nd9(A), 7nda(A), 7ndb(A), 7ndc(A), 7ndd(A), 7nt9(A), 7nta(B), 7ntc(A),
		2. Ligand: NAG-NAG × 344 NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose. PDB codes: 6vsb(A), 6vxx(A), 6vyb(A), 6wps(A), 6wpt(A), 6x6p(A), 6xcm(A), 6xf5(A), 6xf6(A), 6xkl(A), 6xlu(A), 6xm0(A), 6xm3(A), 6xm4(A), 6xm5(A), 6xra(C), 6z43(A), 6zge(A), 6zgf(A), 6zgi(A), 6zhd(A), 6zow(C), 6zox(A), 6zoy(A), 6zoz(A), 6zp0(A), 6zp1(A), 6zp2(A), 6zp5(A), 6zp7(A), 7ad1(A), 7akd(A), 7bbh(A), 7bnn(A), 7byr(B), 7c2l(A), 7cab(A), 7cac(A), 7cai(A), 7cak(A), 7cn8(A), 7ct5(A), 7cwm(A), 7cwn(A), 7cws(O), 7cwu(B), 7czp(A), 7czq(A), 7czr(A), 7czs(A), 7czt(A), 7czu(A), 7czv(A), 7czw(A), 7czx(A), 7czy(A), 7czz(A), 7d00(A), 7d03(A), 7d0b(A), 7d0c(A), 7d0d(A), 7df3(A), 7df4(C), 7dwy(A), 7dwz(A), 7dx0(A), 7dx1(A), 7dx2(A), 7dx3(A), 7dx5(A), 7dx6(A), 7dx7(A), 7dx8(A), 7dx9(A), 7e7b(A), 7e7d(A), 7jji(A), 7jv4(A), 7jv6(A), 7jvc(A), 7jw0(A), 7jwy(A), 7jzl(A), 7jzn(A), 7k43(A), 7k4n(A), 7k8s(A), 7k8t(A), 7k8v(A), 7k8w(A), 7k8z(A), 7kdg(A), 7kdi(A), 7kdj(A), 7kdk(A), 7kdl(A), 7ke4(A), 7ke6(A), 7ke7(A), 7ke8(A), 7ke9(A), 7kea(A), 7keb(A), 7kec(A), 7kj2(A), 7kj3(A), 7kj4(A), 7kj5(A), 7kml(A), 7kms(A), 7krs(A), 7ks9(A), 7kxk(A), 7l02(A), 7l09(A), 7l2d(A), 7l2e(A), 7l2f(A), 7l56(A), 7l57(A), 7l58(A), 7ls9(A), 7lss(B), 7lwm(A), 7lwn(A), 7lwo(A), 7lwt(A), 7lww(A), 7m6f(A), 7m6g(A), 7m6i(A), 7m8k(A), 7mjg(A), 7mjh(A), 7mjj(A), 7mjk(A), 7mjm(A), 7mkl(A), 7nd3(A), 7nd4(A), 7nd5(A), 7nd6(A), 7nd7(A), 7nd8(A), 7nd9(B), 7nda(A), 7ndb(A), 7ndc(A), 7ndd(A), 7nt9(A), 7nta(B), 7ntc(A),
		3. Ligand: NAG-NAG-BMA × 6 NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose, BMA=Beta-D-Mannopyranose. PDB codes: 6zow(C), 6zp5(C), 6zp7(B), 7ld1(A),
		4. Ligand: NAG-NAG-FUC × 5 NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose, FUC=Alpha-L-Fucopyranose. PDB codes: 6xcn(A), 7bnn(A), 7krq(A), 7krr(B), 7krs(A).
		5. Ligand: NAG-NAG-MAN × 5 NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose, MAN=Alpha-D-Mannopyranose. PDB codes: 7krq(A), 7krr(B), 7krs(A).
		6. Ligand: NAG-NAG-BMA-MAN × 2 NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose, BMA=Beta-D-Mannopyranose, MAN=Alpha-D-Mannopyranose. PDB codes: 6zp5(C), 6zp7(B).
		7. Ligand: FUC × 1 Alpha-L-Fucopyranose PDB code: 7akd(A).
		8. Ligand: NAG-NAG-MAN-MAN × 1 NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose, MAN=Alpha-D-Mannopyranose. PDB code: 6xra(C).

Cluster 5 contains 6 ligand types

Selection shortcuts: select all/none invert selection.
Ligand		Description
		1. Ligand: NAG × 33 n-acetylglucosamine 2-Acetamido-2-Deoxy-Beta-D-Glucopyranose PDB codes: 6xra(C), 7a25(A), 7a29(A), 7a94(A), 7akd(A), 7b18(A), 7bbh(A), 7cn4(A), 7cwl(A), 7jw0(A), 7k8x(A), 7k8y(B), 7k90(A), 7kdh(A), 7kj3(A), 7kj4(A), 7kmk(A), 7ksg(A), 7l3n(B), 7lwm(A), 7lwn(A), 7lwo(A), 7lwp(A), 7lwu(A), 7lwv(A), 7lyk(A), 7lym(A), 7lyn(A), 7lyo(A), 7lyp(A), 7lyq(A), 7m6h(A), 7nd9(B).
		2. Ligand: NAG-NAG × 154 NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose. PDB codes: 6vsb(A), 6vxx(A), 6vyb(A), 6wps(A), 6wpt(A), 6x6p(A), 6x79(A), 6xcm(A), 6xey(A), 6xf5(A), 6xf6(A), 6xkl(A), 6xlu(A), 6xm0(A), 6xm3(A), 6xm4(A), 6xm5(A), 6z43(A), 6zb4(C), 6zb5(C), 6zge(A), 6zgi(A), 6zhd(A), 6zox(A), 6zoy(A), 6zoz(A), 6zp0(A), 6zp1(A), 6zp2(A), 7a4n(A), 7ad1(A), 7bnn(A), 7bno(A), 7byr(A), 7c2l(A), 7cab(A), 7cac(A), 7cai(A), 7cak(A), 7chh(A), 7cn8(A), 7cn9(A), 7ct5(A), 7cwm(A), 7cwn(A), 7cws(O), 7cwu(B), 7czp(A), 7czq(A), 7czr(A), 7czs(A), 7czt(A), 7czu(A), 7czv(A), 7czw(A), 7czx(A), 7czy(A), 7czz(A), 7d00(A), 7d03(A), 7d0b(A), 7d0c(A), 7d0d(A), 7df3(A), 7df4(C), 7dwy(A), 7dwz(A), 7dx0(A), 7dx1(A), 7dx2(A), 7dx3(A), 7dx5(A), 7dx6(A), 7dx7(A), 7dx8(A), 7dx9(A), 7e7b(A), 7e7d(A), 7jji(A), 7jv4(A), 7jv6(A), 7jvc(A), 7jwy(A), 7jzl(A), 7jzn(A), 7k43(A), 7k4n(A), 7k8s(A), 7k8t(A), 7k8v(A), 7k8w(A), 7k8z(A), 7kdg(A), 7kdi(A), 7kdj(A), 7kdk(A), 7kdl(A), 7ke4(A), 7ke6(A), 7ke7(A), 7ke8(A), 7ke9(A), 7kea(A), 7keb(A), 7kec(A), 7kj2(A), 7kj5(A), 7kml(A), 7kms(A), 7kmz(C), 7knb(C), 7kne(C), 7knh(C), 7kni(A), 7krr(B), 7krs(A), 7ks9(A), 7l2d(A), 7l2e(A), 7l2f(A), 7l56(A), 7l57(A), 7l58(A), 7ls9(A), 7lss(B), 7lwt(A), 7lww(A), 7lxy(A), 7lxz(A), 7ly2(A), 7m6f(A), 7m6g(A), 7m8k(A), 7mjg(A), 7mjh(A), 7mjj(A), 7mjk(A), 7mjm(A), 7mkl(A), 7nd3(A), 7nd4(A), 7nd5(A), 7nd6(A), 7nd7(A), 7nd8(A), 7nd9(A), 7nda(A), 7ndb(A), 7ndc(A), 7ndd(A), 7nt9(A), 7nta(B), 7ntc(A).
		3. Ligand: NAG-NAG-BMA × 6 NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose, BMA=Beta-D-Mannopyranose. PDB codes: 6xcn(A), 6zgf(A), 6zp5(C), 6zp7(B), 7kxk(A), 7ld1(A).
		4. Ligand: NAG-NAG-BMA-MAN × 3 NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose, BMA=Beta-D-Mannopyranose, MAN=Alpha-D-Mannopyranose. PDB codes: 6zow(C), 6zp5(A), 6zp7(A).
		5. Ligand: NAG-NAG-BMA-MAN-MAN-MAN-BMA-BMA × 2 NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose, BMA=Beta-D-Mannopyranose, MAN=Alpha-D-Mannopyranose. PDB codes: 7l02(A), 7l09(A).
		6. Ligand: NAG-NAG-MAN × 1 NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose, MAN=Alpha-D-Mannopyranose. PDB code: 7krq(A).

Cluster 6 contains 7 ligand types

Selection shortcuts: select all/none invert selection.
Ligand		Description
		1. Ligand: NAG × 116 n-acetylglucosamine 2-Acetamido-2-Deoxy-Beta-D-Glucopyranose PDB codes: 6xey(A), 6xf5(A), 6xkl(A), 6xm0(A), 6xm4(A), 6zb4(C), 6zb5(C), 6zge(A), 6zhd(A), 6zox(A), 6zp0(A), 6zp1(A), 6zp2(A), 7a25(A), 7a29(A), 7a4n(A), 7ad1(A), 7b18(A), 7bnn(A), 7bno(A), 7byr(A), 7cab(A), 7cac(A), 7cai(A), 7chh(A), 7cn4(A), 7cwl(A), 7cwm(A), 7cwn(A), 7cws(O), 7cwu(B), 7df3(A), 7dx9(A), 7k8s(A), 7k8v(A), 7k8w(A), 7k8x(A), 7k8y(B), 7k8z(A), 7kdh(A), 7kdi(A), 7kdj(A), 7kdl(A), 7ke7(A), 7ke8(A), 7ke9(A), 7kea(A), 7keb(A), 7kec(A), 7kj3(A), 7kl9(A), 7kmk(A), 7kms(A), 7kmz(C), 7knb(C), 7kne(C), 7knh(C), 7kni(A), 7krq(A), 7krr(B), 7ksg(A), 7l2e(A), 7l3n(B), 7l56(A), 7l57(A), 7l58(A), 7lqv(A), 7ls9(A), 7lss(B), 7lwm(A), 7lwn(A), 7lwo(A), 7lwp(A), 7lwt(A), 7lwu(A), 7lwv(A), 7lyk(A), 7lyl(A), 7lym(A), 7lyo(A), 7lyp(A), 7lyq(A), 7m6e(A), 7m6f(A), 7m6h(A), 7m8k(A), 7mjg(A), 7mjh(A), 7mjj(A), 7mjk(A), 7mjm(A), 7nt9(A), 7nta(B).
		2. Ligand: NAG-NAG × 149 NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose. PDB codes: 6vsb(A), 6vxx(A), 6vyb(A), 6wps(A), 6wpt(A), 6x6p(A), 6x79(A), 6xcn(A), 6xf5(A), 6xf6(A), 6xkl(A), 6xlu(A), 6xm0(A), 6xm3(A), 6xm4(A), 6xm5(A), 6z43(A), 6zge(A), 6zgf(A), 6zgi(A), 6zhd(A), 6zow(C), 6zox(A), 6zoy(A), 6zoz(A), 6zp0(A), 6zp1(A), 6zp2(A), 6zp5(C), 6zp7(B), 7ad1(A), 7akd(A), 7bbh(A), 7c2l(A), 7cab(A), 7cac(A), 7cai(A), 7cak(A), 7cn8(A), 7ct5(A), 7cwm(A), 7cwn(A), 7cws(O), 7cwu(B), 7czp(A), 7czq(A), 7czr(A), 7czs(A), 7czt(A), 7czu(A), 7czv(A), 7czw(A), 7czx(A), 7czy(A), 7czz(A), 7d00(A), 7d03(A), 7d0b(A), 7d0c(A), 7d0d(A), 7df3(A), 7df4(C), 7dwy(A), 7dwz(A), 7dx0(A), 7dx1(A), 7dx2(A), 7dx3(A), 7dx5(A), 7dx6(A), 7dx7(A), 7dx8(A), 7dx9(A), 7e7b(A), 7e7d(A), 7jji(A), 7jv4(A), 7jv6(A), 7jvc(A), 7jw0(A), 7jwy(A), 7jzl(A), 7jzn(A), 7k43(A), 7k4n(A), 7k8s(A), 7k8t(A), 7k8w(A), 7k8z(A), 7kdg(A), 7kdi(A), 7kdj(A), 7kdk(A), 7kdl(A), 7ke4(A), 7ke6(A), 7ke7(A), 7ke8(A), 7ke9(A), 7kea(A), 7keb(A), 7kec(A), 7kj2(A), 7kj3(A), 7kj4(A), 7kj5(A), 7kml(A), 7krr(B), 7krs(A), 7ks9(A), 7kxk(A), 7l2d(A), 7l2e(A), 7l2f(A), 7ls9(A), 7lww(A), 7lxy(A), 7lxz(A), 7ly2(A), 7m6f(A), 7m6g(A), 7m8k(A), 7mjg(A), 7mjh(A), 7mjj(A), 7mjk(A), 7mjm(A), 7mkl(A), 7nd3(A), 7nd4(A), 7nd5(A), 7nd6(A), 7nd7(A), 7nd8(A), 7nd9(A), 7nda(A), 7ndb(A), 7ndc(A), 7ndd(A), 7nt9(A), 7nta(B), 7ntc(A).
		3. Ligand: NAG-NAG-BMA-MAN × 3 NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose, BMA=Beta-D-Mannopyranose, MAN=Alpha-D-Mannopyranose. PDB codes: 6zp5(A), 6zp7(A), 7cn9(A).
		4. Ligand: NAG-NAG-BMA-MAN-MAN × 2 NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose, BMA=Beta-D-Mannopyranose, MAN=Alpha-D-Mannopyranose. PDB codes: 7l02(A), 7l09(A).
		5. Ligand: NAG-FUC × 1 NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose, FUC=Alpha-L-Fucopyranose. PDB code: 6xcm(A).
		6. Ligand: NAG-NAG-BMA × 1 NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose, BMA=Beta-D-Mannopyranose. PDB code: 6zow(C).
		7. Ligand: NAG-NAG-MAN × 1 NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose, MAN=Alpha-D-Mannopyranose. PDB code: 7krq(A).