PDBsum entry 7e7d

Viral protein

PDB id: 7e7d

Contents

Protein chains

1080 a.a.

Ligands

NAG-NAG ×32

NAG ×19

ELA ×3

PDB id:

7e7d

Name:

Viral protein

Title:

Cryo-em structure of the sars-cov-2 wild-type s-trimer from a subunit vaccine candidate

Structure:

Spike glycoprotein,collagen alpha-1(i) chain. Chain: a, b, c. Synonym: s glycoprotein,e2,peplomer protein,alpha-1 type i collagen. Engineered: yes. Other_details: chimeric protein

Source:

Severe acute respiratory syndrome coronavirus 2, homo sapiens. 2019-ncov, sars-cov-2, human. Organism_taxid: 2697049, 9606. Gene: s, 2, col1a1. Expressed in: cricetulus griseus. Expression_system_taxid: 10029

Authors:

S.Zheng,J.Ma

Key ref:

J.Ma et al. Cryo-Em structure of s-Trimer, A subunit vaccine cand for covid-19.. J virol, . PubMed id: 33692215

Date:

25-Feb-21 Release date: 24-Mar-21

Protein chains

P02452  (CO1A1_HUMAN) -  Collagen alpha-1(I) chain from Homo sapiens

Seq: 1464 a.a.

Struc: 1080 a.a.*

Protein chains

P0DTC2  (SPIKE_SARS2) -  Spike glycoprotein from Severe acute respiratory syndrome coronavirus 2

Seq: 1273 a.a.

Struc: 1080 a.a.

* PDB and UniProt seqs differ at 881 residue positions (black crosses)