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Ligand clusters for UniProt code P0ADA1

Ligand clusters for P0ADA1: Thioesterase 1/protease 1/lysophospholipase L1 from Escherichia coli (strain K12)

6 ligand clusters
Cluster 1.
2 ligand types
6 ligands
Cluster 2.
2 ligand types
2 ligands
Cluster 3.
2 ligand types
6 ligands
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
2 ligands
Cluster 6.
1 ligand type
1 ligand
Representative protein: 5tifA  
JSmol
 

Structures

PDB   Schematic diagram
5tifA    
5tieA    
5tidA    
1u8uA    
1v2gA    
 more ...

 

 Cluster 1 contains 2 ligand types

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Ligand Description


 
1. Ligand: GOL × 1
glycerin
Glycerol
PDB code: 1ivn(A).


 
2. Ligand: OCA × 5
Octanoic acid (caprylic acid)
PDB codes: 1u8u(A), 1v2g(A), 5tid(A), 5tie(A), 5tif(A).

 

 Cluster 2 contains 2 ligand types

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Ligand Description


 
1. Ligand: GOL × 1
glycerin
Glycerol
PDB code: 1u8u(A).


 
2. Ligand: PEG × 1
Di(hydroxyethyl)ether
PDB code: 5tif(A).

 

 Cluster 3 contains 2 ligand types

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Ligand Description


 
1. Ligand: GOL × 1
glycerin
Glycerol
PDB code: 1u8u(A).


 
2. Ligand: SO4 × 5
Sulfate ion
PDB codes: 1ivn(A), 1j00(A), 1jrl(A), 1u8u(A), 1v2g(A).

 

 Cluster 4 contains 1 ligand type

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Ligand Description


 
1. Ligand: GOL × 1
glycerin
Glycerol
PDB code: 1u8u(A).

 

 Cluster 5 contains 1 ligand type

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Ligand Description


 
1. Ligand: IMD × 2
Imidazole
PDB codes: 1jrl(A), 1v2g(A).

 

 Cluster 6 contains 1 ligand type

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Ligand Description

_Cl
 
1. Metal: _CL × 1
PDB code: 5tic(A).

 

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