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Ligand clusters for UniProt code P0A6F5

Ligand clusters for P0A6F5: 60 kDa chaperonin OS=Escherichia coli (strain K12) OX=83333 GN=groL PE=1 SV=2

Top 6 (of 11) ligand clusters
Cluster 1.
7 ligand types
45 ligands
Cluster 2.
2 ligand types
2 ligands
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
2 ligands
Cluster 6.
1 ligand type
1 ligand
Representative protein: 1kp8A  
JSmol
 

Structures

PDB   Schematic diagram
1kp8A    
4aaqA    
4aarA    
2c7eA    
4aauA    
 more ...

 

 Cluster 1 contains 7 ligand types

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Ligand Description

_Mg
 
1. Metal: _MG × 17
PDB codes: 1aon(A), 1kp8(A), 1pcq(A), 1pf9(A), 1svt(A), 1sx3(A), 1sx4(A), 2c7e(A), 3wvl(A), 3zpz(A), 3zq0(A), 3zq1(A), 4aas(A), 4aau(A), 4ab2(A), 4ab3(A), 5opx(A).

__K
 
2. Metal: __K × 8
PDB codes: 1kp8(A), 1pcq(A), 1svt(A), 1sx3(A), 1xck(A), 2c7e(A), 3wvl(A), 5opx(A).


 
3. Ligand: ATP × 8
Adenosine-5'-Triphosphate
PDB codes: 2c7e(A), 3wvl(A), 4aaq(A), 4aar(A), 4aas(A), 4aau(A), 4ab2(A), 4ab3(A).


 
4. Ligand: ADP × 7
Adenosine-5'-Diphosphate
PDB codes: 1aon(A), 1pf9(A), 1sx4(A), 3zpz(A), 3zq0(A), 3zq1(A), 5opx(A).


 
5. Ligand: ADP-AF3 × 2
ADP=Adenosine-5'-Diphosphate, AF3=Aluminum fluoride.
PDB codes: 1pcq(A), 1svt(A).


 
6. Ligand: AGS × 2
Phosphothiophosphoric acid-Adenylate ester
PDB codes: 1kp8(A), 1sx3(A).


 
7. Ligand: BEF × 1
Beryllium trifluoride ion
PDB code: 5opx(A).

 

 Cluster 2 contains 2 ligand types

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Ligand Description


 
1. Ligand: MPD × 1
(4s)-2-Methyl-2,4-Pentanediol
PDB code: 1xck(A).


 
2. Ligand: SO4 × 1
Sulfate ion
PDB code: 1kp8(A).

 

 Cluster 3 contains 1 ligand type

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Ligand Description


 
1. Ligand: MPD × 1
(4s)-2-Methyl-2,4-Pentanediol
PDB code: 1xck(A).

 

 Cluster 4 contains 1 ligand type

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Ligand Description


 
1. Ligand: MPD × 1
(4s)-2-Methyl-2,4-Pentanediol
PDB code: 1xck(A).

 

 Cluster 5 contains 1 ligand type

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Ligand Description


 
1. Ligand: GOL × 2
glycerin
Glycerol
PDB codes: 1fy9(A), 1fya(A).

 

 Cluster 6 contains 1 ligand type

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Ligand Description


 
1. Ligand: SO4 × 1
Sulfate ion
PDB code: 1kp8(A).

 

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