Ligand clusters for UniProt code P02794

Ligand clusters for P02794: Ferritin heavy chain from Homo sapiens

		Top 6 (of 40) ligand clusters Cluster 1. 7 ligand types 24 ligands Cluster 2. 5 ligand types 11 ligands Cluster 3. 2 ligand types 2 ligands Cluster 4. 5 ligand types 7 ligands Cluster 5. 5 ligand types 7 ligands Cluster 6. 10 ligand types 85 ligands
Representative protein: 5up8A

Structures

PDB		Schematic diagram
5up8A
6m52A
6m54A
2fhaA
4dyzA
		more ...

Cluster 1 contains 7 ligand types

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Ligand		Description
		1. Ligand: GOL × 9 glycerin Glycerol PDB codes: 2chi(A), 2cih(A), 2clu(A), 2cn6(A), 2cn7(A), 2iu2(A), 6h6u(A), 7ck8(A), 7ck9(A).
_Zn		2. Metal: _ZN × 5 PDB codes: 2cei(A), 2cih(A), 2cn6(A), 2iu2(A), 7k3v(A).
		3. Ligand: TRS × 1 tromethamine 2-Amino-2-Hydroxymethyl-Propane-1,3-Diol PDB code: 4dyy(A).
		4. Ligand: MPD × 3 (4s)-2-Methyl-2,4-Pentanediol PDB codes: 2z6m(A), 3erz(A), 7k26(A).
_Cu		5. Metal: _CU × 3 PDB codes: 4dyx(A), 4dyy(A), 4dz0(A).
		6. Ligand: BCN × 2 Bicine PDB codes: 4oyn(A), 4ykh(A).
		7. Ligand: EDO × 1 1,2-Ethanediol PDB code: 4dyy(A).

Cluster 2 contains 5 ligand types

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Ligand		Description
_Zn		1. Metal: _ZN × 3 PDB codes: 5cmq(A), 5cmr(A), 5up8(A).
		2. Ligand: V9Y × 3 N~2~,N~5~-Dihydroxyfuran-2,5-Dicarboxamide PDB codes: 7jgk(A), 7jgo(A), 7jgq(A).
		3. Ligand: BYD × 2 N,N'-Dihydroxybenzene-1,4-Dicarboxamide PDB codes: 5cmr(A), 5up8(A).
_Ni		4. Metal: _NI × 2 PDB codes: 5up7(A), 7jgp(A).
_Co		5. Metal: _CO × 1 PDB code: 5vtd(A).

Cluster 3 contains 2 ligand types

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Ligand		Description
		1. Ligand: AEN × 1 5-(1-Sulfonaphthyl)-Acetylamino-Ethylamine PDB code: 4dz0(A).
_Au		2. Metal: _AU × 1 PDB code: 3es3(A).

Cluster 4 contains 5 ligand types

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Ligand		Description
		1. Ligand: TRS × 1 tromethamine 2-Amino-2-Hydroxymethyl-Propane-1,3-Diol PDB code: 4oyn(A).
_Zn		2. Metal: _ZN × 1 PDB code: 7k3w(A).
_Ca		3. Metal: _CA × 2 PDB codes: 6b8f(A), 6b8g(A).
_Cl		4. Metal: _CL × 2 PDB codes: 4y08(A), 4ykh(A).
		5. Ligand: PEG × 1 Di(hydroxyethyl)ether PDB code: 5up9(A).

Cluster 5 contains 5 ligand types

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Ligand		Description
_Mg		1. Metal: _MG × 2 PDB codes: 5n27(A), 6ftv(A).
_Zn		2. Metal: _ZN × 1 PDB code: 7k3w(A).
		3. Ligand: ACT × 2 Acetate ion PDB codes: 6h6t(G),
		4. Ligand: PGE × 1 Triethylene glycol PDB code: 5up9(A).
_Cl		5. Metal: _CL × 1 PDB code: 4ykh(A).

Cluster 6 contains 10 ligand types

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Ligand		Description
_Fe		1. Metal: _FE × 23 PDB codes: 4oyn(A), 5jkk(A), 5jkl(A), 5jkm(A), 6b8f(A), 6b8g(A), 6h6t(A), 6h6u(A), 6ipp(A), 6ke2(A), 6ke4(A),
_Zn		2. Metal: _ZN × 19 PDB codes: 2cei(A), 2chi(A), 2cih(A), 2clu(A), 2cn6(A), 5cmq(A), 5cmr(A), 5up8(A), 5up9(A), 7k3v(A), 7k3w(A).
_Mg		3. Metal: _MG × 13 PDB codes: 5jkk(A), 5jkl(A), 5jkm(A), 5n26(A), 5n27(A), 6ftv(A), 6ipo(A), 6ipq(A).
Fe2		4. Metal: FE2 × 12 PDB codes: 4y08(A), 4ykh(A), 4zjk(A),
_Ca		5. Metal: _CA × 6 PDB codes: 2chi(A), 2cn7(A), 4dyz(A), 4dz0(A), 5gn8(A),
_Cu		6. Metal: _CU × 5 PDB codes: 4dyx(A), 4dyy(A), 4dyz(A), 4dz0(A).
_Ni		7. Metal: _NI × 3 PDB codes: 5up7(A), 7jgp(A).
_Co		8. Metal: _CO × 2 PDB codes: 5vtd(A),
		9. Ligand: PEG × 1 Di(hydroxyethyl)ether PDB code: 5up9(A).
_Na		10. Metal: _NA × 1 PDB code: 5cmr(A).