Ligand clusters for UniProt code P00805

Ligand clusters for P00805: L-asparaginase 2 from Escherichia coli (strain K12)

		Top 6 (of 8) ligand clusters Cluster 1. 6 ligand types 34 ligands Cluster 2. 4 ligand types 21 ligands Cluster 3. 2 ligand types 5 ligands Cluster 4. 1 ligand type 1 ligand Cluster 5. 2 ligand types 4 ligands Cluster 6. 1 ligand type 1 ligand
Representative protein: 6pa3A

Structures

PDB		Schematic diagram
6pa3A
6pabA
6pa8A
6pacA
6v26A
		more ...

Cluster 1 contains 6 ligand types

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Ligand		Description
		1. Ligand: ASP × 19 aspartic acid PDB codes: 1ho3(A), 1nns(A), 3eca(A), 5mq5(A), 6pa2(A), 6pa4(A), 6paa(A), 6pab(A), 6pac(A), 6uog(A), 6uoh(A), 6v24(A), 6v25(A), 6v26(A), 6v29(A), 6v5f(A).
		2. Ligand: ACY × 5 acetic acid Acetic acid PDB codes: 6nx6(A), 6nx7(A), 6nx8(A), 6nx9(A), 6nxa(A).
		3. Ligand: CIT × 1 citric acid Citric acid PDB code: 6nxb(A).
		4. Ligand: GOL × 1 glycerin Glycerol PDB code: 6nxa(A).
		5. Ligand: SIN × 1 succinic acid Succinic acid PDB code: 6v5f(B).
		6. Ligand: ASN × 7 PDB codes: 6pa3(A), 6pa5(A), 6pa6(A), 6pa8(A), 6pa9(A), 6v2a(A), 6v2b(A).

Cluster 2 contains 4 ligand types

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Ligand		Description
		1. Ligand: ASP × 13 aspartic acid PDB codes: 3eca(A), 5mq5(A), 6pa2(A), 6pa4(A), 6paa(A), 6pab(A), 6pac(A), 6uog(A), 6v26(A), 6v29(A), 6v5f(B).
		2. Ligand: CIT × 1 citric acid Citric acid PDB code: 6nxb(A).
		3. Ligand: SIN × 1 succinic acid Succinic acid PDB code: 6v5f(A).
		4. Ligand: ASN × 6 PDB codes: 6pa3(A), 6pa5(A), 6pa6(A), 6pa8(A), 6v2a(A), 6v2b(A).

Cluster 3 contains 2 ligand types

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Ligand		Description
		1. Ligand: GOL × 3 glycerin Glycerol PDB codes: 6nxb(A), 6pa8(A), 6v29(A).
		2. Ligand: CIT × 2 citric acid Citric acid PDB codes: 6pab(A), 6v2b(A).

Cluster 4 contains 1 ligand type

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Ligand		Description
		1. Ligand: CIT × 1 citric acid Citric acid PDB code: 6pab(B).

Cluster 5 contains 2 ligand types

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Ligand		Description
_Mg		1. Metal: _MG × 1 PDB code: 6pa8(A).
		2. Ligand: IMD × 3 Imidazole PDB codes: 6pa3(A),

Cluster 6 contains 1 ligand type

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Ligand		Description
		1. Ligand: GOL × 1 glycerin Glycerol PDB code: 6pa5(A).