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Ligand clusters for UniProt code P00734

Ligand clusters for P00734: Prothrombin from Homo sapiens

Top 6 (of 27) ligand clusters
Cluster 1.
303 ligand types
559 ligands
Cluster 2.
41 ligand types
174 ligands
Cluster 3.
39 ligand types
528 ligands
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
4 ligand types
4 ligands
Cluster 6.
3 ligand types
6 ligands
Representative protein: 6bjrA  
JSmol
 

Structures

PDB   Schematic diagram
6bjrA    
6c2wA    
4o03A    
4nzqA    
4hzhA    
 more ...

 

 Cluster 1 contains 303 ligand types (of which only 20 are listed. Click for all)

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Selection shortcuts: select all/none invert selection.
Ligand Description


 
1. Ligand: GOL × 50
glycerin
Glycerol
PDB codes: 1jou(B), 1rd3(B), 2afq(B), 3b9f(H), 3jz2(B), 3qto(H), 3qtv(H), 3qwc(H), 3qx5(H), 3rlw(H), 3rm2(H), 3rml(H), 3rmm(H), 3rmn(H), 3rmo(H), 3sha(H), 3si3(H), 3si4(H), 3sv2(H), 3t5f(H), 3u9a(H), 4rkj(B), 4ue7(H), 4ufd(H), 5a2m(H), 5jfd(H), 5lce(H), 5lpd(H), 5mjt(H), 5mls(H), 5mm6(H), 6fjt(H), 6hsx(H), 6pxj(H), 6t3q(H), 6t4a(H), 6t53(H), 6t54(H), 6v5t(E), 6yhg(H).


 
2. Ligand: DMS × 21
dimethyl sulfoxide
Dimethyl sulfoxide
PDB codes: 1way(B), 1wbg(B), 2c8y(B), 2c93(B), 4n3l(H), 4nze(H), 4ue7(H), 5jzy(H), 6eo8(H), 6eo9(H), 6fjt(H), 6gbw(H), 6rot(H), 6y02(H), 6ymp(H), 6yqv(H), 6zuh(H).

_Zn
 
3. Metal: _ZN × 5
PDB codes: 1c1u(H), 1c1v(H), 1c1w(H), 1ghy(H),


 
4. Ligand: 15U × 2
argatroban
(2r,4r)-4-Methyl-1-(N~2~-{[(3s)-3-Methyl-1,2,3,4- Tetrahydroquinolin-8-Yl]sulfonyl}-L-
Arginyl) piperidine-2-Carboxylic acid
PDB codes: 4hfp(B), 4rn6(A).


 
5. Ligand: 08D × 1
sulfamethoxazole
Sulfamethoxazole
PDB code: 6ysx(H).


 
6. Ligand: ACY × 1
acetic acid
Acetic acid
PDB code: 3dd2(H).


 
7. Ligand: PRL × 1
proflavine
Proflavin
PDB code: 1bcu(H).


 
8. Ligand: TRS × 1
tromethamine
2-Amino-2-Hydroxymethyl-Propane-1,3-Diol
PDB code: 3nxp(A).

_Mg
 
9. Metal: _MG × 1
PDB code: 3dd2(H).

_Na
 
10. Metal: _NA × 95
PDB codes: 1a2c(H), 1a46(H), 1a4w(H), 1a5g(H), 1a61(H), 1c1u(H), 1c1v(H), 1c1w(H), 1c4u(2), 1c4v(2), 1c5l(H), 1c5n(H), 1c5o(H), 1ca8(B), 1d6w(A), 1d9i(A), 1de7(H), 1ghv(H), 1ghw(H), 1ghx(H), 1ghy(H), 1gj4(H), 1gj5(H), 1o2g(H), 1o5g(H), 1oyt(H), 1tbz(H), 1vzq(H), 1ype(H), 1ypl(H), 2bdy(A), 2c8w(B), 2c8x(B), 2c8y(B), 2c8z(B), 2c90(B), 2c93(B), 2cf8(H), 2cf9(H), 2cn0(H), 2gde(H), 2jh0(D), 2jh5(D), 2jh6(D), 2pks(C), 2pw8(H), 2thf(B), 2uuf(B), 2uuj(B), 2uuk(B), 2v3h(H), 2v3o(H), 2zc9(H), 2zda(H), 2zdv(H), 2zf0(H), 2zff(H), 2zfp(H), 2zfq(H), 2zfr(H), 2zg0(H), 2zgb(H), 2zgx(H), 2zhe(H), 2zhf(H), 2zhq(H), 2zhw(H), 2zi2(H), 2ziq(H), 2znk(H), 2zo3(H), 3bv9(B), 3d49(H), 3da9(B), 3dhk(H), 3dt0(H), 3dux(H), 3egk(H), 3eq0(H), 3f68(H), 3po1(C), 3utu(H), 4ch2(B), 4ch8(B), 4dt7(B), 4dy7(B), 4h6s(B), 4hfp(B), 5luw(H), 5luy(H), 5mjt(H), 5mls(H), 5mm6(H), 7kme(H), 8kme(2).


 
11. Ligand: 0G6 × 49
D-Phenylalanyl-N-[(2s,3s)-6-{[Amino(iminio) methyl]amino}-1-Chloro-2-Hydroxyhexan-3-Yl]-L-
Prolinamide
PDB codes: 1abj(H), 1dwe(H), 1hai(H), 1hao(H), 1hap(H), 1hlt(H), 1nrr(H), 1ppb(H), 1sfq(B), 1shh(B), 1thp(B), 1tmu(H), 1tq7(B), 1xmn(B), 1z8i(B), 1z8j(B), 2a45(B), 2od3(B), 2pgq(B), 2thf(B), 3dd2(H), 3p6z(B), 3qlp(H), 4ch2(B), 4ch8(B), 4dih(H), 4dii(H), 4i7y(H), 4lz1(H), 4lz4(B), 4rko(B), 5cmx(H), 5do4(H), 5e8e(H), 5ew1(H), 5ew2(H), 5luw(H), 5luy(H), 5to3(B), 6eo6(H), 6eo7(H), 6evv(H), 6gn7(H), 6px5(B), 6v64(B), 6z8v(H), 6z8w(H), 6z8x(H), 7ntu(B).


 
12. Ligand: BEN × 7
Benzamidine
PDB codes: 1dwb(H), 2zfq(H), 2zi2(H), 2ziq(H), 3d49(H), 3p70(B), 4ueh(H).


 
13. Ligand: 0G7 × 4
D-Phenylalanyl-N-[(3s)-6-Carbamimidamido-1-Chloro-2- Oxohexan-3-Yl]-L-Prolinamide
PDB codes: 1hut(H), 2hpp(H), 2hpq(H), 3pmh(B).


 
14. Ligand: DPN-PRO-ARG × 4
DPN=D-Phenylalanine.
PDB codes: 1tmt(H), 2hgt(H), 3vxe(H), 3vxf(H).


 
15. Ligand: PHE-PRO-ARG × 4
PDB codes: 1b7x(B), 1ook(B), 2h9t(H), 3bf6(H).


 
16. Ligand: 0ZJ × 2
N-(Sulfanylacetyl)-D-Phenylalanyl-N-[(2s,3s)-6- {[Amino(iminio)methyl]amino}-1-Chloro-2-
Hydroxyhexan- 3-Yl]-L-Prolinamide
PDB codes: 1nu7(B), 1nu9(A).


 
17. Ligand: 22U × 2
D-Phenylalanyl-N-(3-Chlorobenzyl)-L-Prolinamide
PDB codes: 2zc9(H), 5mls(H).


 
18. Ligand: 23U × 2
Beta-Phenyl-D-Phenylalanyl-N-(3-Chlorobenzyl)-L- Prolinamide
PDB codes: 3dhk(H), 5mjt(H).


 
19. Ligand: 2FN × 2
N-(2-{[5-(5-Chlorothiophen-2-Yl)-1,2-Oxazol-3- Yl]methoxy}-6-[3-(Beta-D-
Glucopyranosyloxy) propoxy]phenyl)-1-(Propan-2-Yl)piperidine-4- Carboxamide
PDB codes: 4n3l(H), 6eo8(H).


 
20. Ligand: 2OJ × 2
N-(2-{[5-(5-Chlorothiophen-2-Yl)-1,2-Oxazol-3- Yl]methoxy}-6-{3-[(2,3,4,6-Tetra-O-Acetyl-Beta-D-
Glucopyranosyl)oxy]propoxy}phenyl)-1-(Propan-2-Yl) piperidine-4-Carboxamide
PDB codes: 4nze(H), 6eo9(H).

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 Cluster 2 contains 41 ligand types (of which only 20 are listed. Click for all)

Selection shortcuts: select all/none invert selection.
Ligand Description


 
1. Ligand: GOL × 4
glycerin
Glycerol
PDB codes: 2afq(B), 3b9f(H), 3nxp(A), 6tkh(H).


 
2. Ligand: ASP-PHE-GLU-GLU-ILE-PRO-GLU-GLU-TYS-LEU × 88
TYS=O-Sulfo-L-Tyrosine.
PDB codes: 1a2c(H), 1a46(H), 1a5g(H), 1a61(H), 1ad8(H), 1ae8(H), 1afe(H), 1aht(H), 1ai8(H), 1aix(H), 1awf(H), 1ay6(H), 1b5g(H), 1bcu(H), 1c5l(H), 1c5n(H), 1d6w(A), 1d9i(A), 1fpc(H), 1g30(B), 1g32(B), 1h8d(H), 1h8i(H), 1hag(E), 1hah(H), 1hgt(H), 1k21(H), 1k22(H), 1kts(B), 1ktt(B), 1ny2(2), 1qhr(B), 1qj1(B), 1qj6(B), 1qj7(B), 1riw(B), 1tbz(H), 1tmb(H), 1tom(H), 1uma(H), 1vr1(H), 1way(B), 1wbg(B), 1xm1(A), 1ype(H), 1ypg(H), 1ypj(H), 1ypk(H), 1ypl(H), 1ypm(H), 1zgi(A), 1zgv(A), 1zrb(A), 2bdy(A), 2jh0(D), 2jh5(D), 2jh6(D), 2uuf(B), 2uuj(B), 2uuk(B), 2zfp(H), 2zgx(H), 2zhe(H), 2zhf(H), 2zhw(H), 2ziq(H), 3biu(H), 3biv(H), 3hat(H), 3p17(H), 4bam(B), 4ban(B), 4bao(B), 4baq(B), 4loy(H), 4lxb(H), 4n3l(H), 5a2m(H), 6eo8(H), 6t3m(H), 6t3q(H), 6t54(H), 6t56(H), 6yn3(H), 6ysj(H), 6ysx(H), 7kme(H), 8kme(2).


 
3. Ligand: ASP-PHE-GLU-GLU-ILE-PRO-GLU-GLU-TYS × 11
TYS=O-Sulfo-L-Tyrosine.
PDB codes: 1a4w(H), 1nrs(H), 1sb1(H), 2zgb(H), 3d49(H), 3dhk(H), 3dt0(H), 3dux(H), 3egk(H), 3f68(H), 3utu(H).


 
4. Ligand: GLY-ASP-PHE-GLU-GLU-ILE-PRO-GLU-GLU-TYS × 8
TYS=O-Sulfo-L-Tyrosine.
PDB codes: 2zc9(H), 2zff(H), 2zfq(H), 2zfr(H), 2zi2(H), 2znk(H), 2zo3(H), 3eq0(H).


 
5. Ligand: ASP-PHE-GLU-GLU-ILE-PRO-GLY-GLU-TYS-LEU × 7
TYS=O-Sulfo-L-Tyrosine.
PDB codes: 1c4v(2), 1twx(B), 2gde(H), 2pks(B), 3po1(B), 4bah(B), 4bak(B).


 
6. Ligand: GLY-ASP-PHE-GLU-GLU-ILE-PRO × 5
PDB codes: 1lhc(H), 1lhd(H), 1lhe(H), 1lhf(H), 1lhg(H).


 
7. Ligand: PHE-GLU-GLU-ILE-PRO-GLU-GLU-TYS × 5
TYS=O-Sulfo-L-Tyrosine.
PDB codes: 1ba8(B), 1bb0(B), 1ca8(B), 4nze(H), 6eo9(H).


 
8. Ligand: SIN-PHE-GLU-GLU-ILE-PRO × 4
SIN=Succinic acid.
PDB codes: 1oyt(H), 2cf9(H), 2v3h(H), 2v3o(H).


 
9. Ligand: TYS × 3
O-Sulfo-L-Tyrosine
PDB codes: 4ud9(H), 5afy(H), 5afz(H).


 
10. Ligand: ASP-PHE-GLU-GLU-ILE × 2
PDB codes: 1bhx(B),


 
11. Ligand: ASP-PHE-GLU-GLU-ILE-PRO-GLU-GLU-TYR × 2
PDB codes: 1bmm(H), 1bmn(H).


 
12. Ligand: ASP-PHE-GLU-GLU-ILE-PRO-GLU-GLU-TYR-LEU × 2
PDB codes: 3vxe(H), 3vxf(H).


 
13. Ligand: ASP-PHE-GLU-GLU-ILE-PRO-GLY-GLU-TYR-LEU × 2
PDB codes: 1hxe(H), 1hxf(H).


 
14. Ligand: ILE × 2
PDB codes: 2cf8(H), 2cn0(H).


 
15. Ligand: PO4 × 2
Phosphate ion
PDB codes: 1rd3(B), 4h6t(A).


 
16. Ligand: SIN-PHE-GLU-GLU × 2
SIN=Succinic acid.
PDB codes: 2cf8(H), 2cn0(H).


 
17. Ligand: ASN-ASP-LYS-TYR-GLU-PRO-PHE-TRP-GLU × 1
PDB code: 3hkj(B).


 
18. Ligand: ASP-PHE × 1
PDB code: 6t4a(H).


 
19. Ligand: ASP-PHE-GLU-GLU-ILE-PRO × 1
PDB code: 2hgt(H).


 
20. Ligand: ASP-PHE-GLU-GLU-ILE-PRO-GLU × 1
PDB code: 1vzq(H).

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 Cluster 3 contains 39 ligand types (of which only 20 are listed. Click for all)

Selection shortcuts: select all/none invert selection.
Ligand Description


 
1. Ligand: NAG × 181
n-acetylglucosamine
2-Acetamido-2-Deoxy-Beta-D-Glucopyranose
PDB codes: 1ae8(H), 1afe(H), 1ba8(B), 1d3d(B), 1d3p(B), 1d3q(B), 1d3t(B), 1d4p(B), 1doj(A), 1dx5(M), 1hag(E), 1hah(H), 1hai(H), 1jou(B), 1mh0(A), 1no9(H), 1p8v(C), 1riw(B), 1sfq(B), 1sg8(B), 1sgi(B), 1sr5(C), 1tmt(H), 1tmu(H), 1tq7(B), 1twx(B), 1uma(H), 1z8i(B), 1z8j(B), 2od3(B), 2pgb(B), 2pgq(B), 3bef(B), 3bei(B), 3biu(H), 3biv(H), 3gic(B), 3hkj(B), 3jz1(B), 3jz2(B), 3lu9(B), 3nxp(A), 3p17(H), 3p6z(B), 3p70(B), 3qgn(B), 3qlp(H), 3qto(H), 3qtv(H), 3qwc(H), 3qx5(H), 3r3g(B), 3rlw(H), 3rly(H), 3rm0(H), 3rm2(H), 3rml(H), 3rmm(H), 3rmn(H), 3rmo(H), 3s7h(B), 3sha(H), 3shc(H), 3si3(H), 3si4(H), 3sv2(H), 3t5f(H), 3u69(H), 3u8o(H), 3u8r(H), 3u8t(H), 3u98(H), 3u9a(H), 3uwj(H), 3vxe(H), 3vxf(H), 4ax9(H), 4ayv(B), 4ayy(B), 4az2(B), 4bah(B), 4bak(B), 4bam(B), 4ban(B), 4baq(B), 4boh(A), 4dih(H), 4dii(H), 4e05(H), 4e06(H), 4e7r(H), 4htc(H), 4hzh(A), 4i7y(H), 4loy(H), 4lxb(H), 4lz1(H), 4lz4(B), 4mlf(B), 4nzq(A), 4o03(A), 4rko(B), 4thn(H), 4ud9(H), 4udw(H), 4ue7(H), 4ueh(H), 4ufd(H), 4ufe(H), 4uff(H), 4ufg(H), 4yes(B), 5a2m(H), 5af9(H), 5afy(H), 5afz(H), 5ahg(H), 5do4(H), 5ew1(H), 5ew2(H), 5gds(H), 5jfd(H), 5jzy(H), 5l6n(H), 5lce(H), 5lpd(H), 5luw(H), 5luy(H), 5nhu(H), 5to3(B), 6bjr(A), 6c2w(A), 6cym(A), 6eo6(H), 6eo7(H), 6fjt(H), 6gbw(H), 6gwe(A), 6hsx(H), 6i51(H), 6p9u(B), 6pxq(B), 6rot(H), 6t3m(H), 6t3q(H), 6t4a(H), 6t52(H), 6t53(H), 6t54(H), 6t55(H), 6t56(H), 6t57(H), 6t7h(A), 6t89(H), 6t8a(H), 6tdt(H), 6tkg(H), 6tkh(H), 6tki(H), 6tkj(H), 6tkl(H), 6y02(H), 6y9h(H), 6yb6(H), 6yhg(H), 6yhj(H), 6ymp(H), 6yn3(H), 6yqv(H), 6ysj(H), 6ysx(H), 6zug(H), 6zuh(H), 6zun(H), 6zuu(H), 6zuw(H), 6zux(H), 6zv7(H), 6zv8(H), 7ntu(B).


 
2. Ligand: GOL × 90
glycerin
Glycerol
PDB codes: 1jou(B), 1xmn(B), 1ype(H), 1ypl(H), 2afq(B), 2b5t(B), 2zfq(H), 2zfr(H), 2zhf(H), 3b9f(H), 3bei(B), 3bv9(B), 3jz1(B), 3jz2(B), 3lu9(B), 3nxp(A), 3rlw(H), 3rly(H), 3rm0(H), 3rm2(H), 3rml(H), 3rmm(H), 3rmn(H), 3rmo(H), 3s7h(B), 3sha(H), 3sqe(E), 3sv2(H), 3t5f(H), 3u9a(H), 4ch2(A), 4e7r(H), 4rkj(B), 4rko(B), 4ud9(H), 4udw(H), 4ue7(H), 4ueh(H), 4ufd(H), 4yes(B), 5af9(H), 5afy(H), 5ahg(H), 5do4(L), 5jfd(H), 5lce(H), 5mjt(H), 5mls(H), 5mm6(H), 6hsx(H), 6pxj(H), 6t53(H), 6t55(H), 6t56(H), 6y02(H), 6yqv(H).


 
3. Ligand: DMS × 78
dimethyl sulfoxide
Dimethyl sulfoxide
PDB codes: 1way(B), 1wbg(B), 2c8x(B), 2c8y(B), 2c8z(B), 2c90(B), 2c93(B), 4n3l(H), 4nze(H), 4ud9(H), 4ue7(H), 5af9(H), 5afy(H), 5ahg(H), 5jfd(H), 5jzy(H), 5lce(H), 5lpd(H), 5mjt(H), 5mls(H), 5mm6(H), 6eo8(H), 6eo9(H), 6fjt(H), 6gbw(H), 6hsx(H), 6i51(H), 6rot(H), 6t52(H), 6t53(H), 6t54(H), 6t57(H), 6t89(H), 6t8a(H), 6tdt(H), 6y02(H), 6y9h(H), 6yb6(H), 6yhj(H), 6ymp(H), 6yn3(H), 6yqv(H), 6ysj(H), 6ysx(H),

_Zn
 
4. Metal: _ZN × 6
PDB codes: 4dih(H), 4dii(H), 6px5(X),

__K
 
5. Metal: __K × 5
PDB codes: 3s7k(A), 4rkj(A),


 
6. Ligand: TRS × 2
tromethamine
2-Amino-2-Hydroxymethyl-Propane-1,3-Diol
PDB codes: 3nxp(A), 3s7k(B).


 
7. Ligand: ACY × 1
acetic acid
Acetic acid
PDB code: 3dd2(H).


 
8. Ligand: CIT × 1
citric acid
Citric acid
PDB code: 5e8e(H).


 
9. Ligand: PO4 × 70
Phosphate ion
PDB codes: 1rd3(B), 2zda(H), 2zdv(H), 3qto(H), 3qtv(H), 3qx5(H), 3rlw(H), 3rly(H), 3rm0(H), 3rm2(H), 3rml(H), 3rmm(H), 3rmn(H), 3rmo(H), 3sha(H), 3si3(H), 3si4(H), 3sv2(H), 3t5f(H), 3u98(H), 3u9a(H), 3uwj(H), 4e7r(H), 4h6t(A), 4ud9(H), 4udw(H), 4ue7(H), 4ueh(H), 4ufd(H), 4ufe(H), 4uff(H), 4ufg(H), 5af9(H), 5afy(H), 5afz(H), 5ahg(H), 5e8e(H), 5jzy(H), 5lce(H), 5lpd(H), 5mjt(H), 5mm6(H), 6fjt(H), 6hsx(H), 6i51(H), 6rot(H), 6t3m(H), 6t3q(H), 6t4a(H), 6t52(H), 6t53(H), 6t55(H), 6t56(H), 6t57(H), 6t8a(H), 6tdt(H), 6y02(H), 6y9h(H), 6yb6(H), 6yhg(H), 6yhj(H), 6ymp(H), 6yn3(H), 6yqv(H), 6ysx(H).


 
10. Ligand: SO4 × 17
Sulfate ion
PDB codes: 2b5t(B), 2pgb(B), 3b9f(H), 3e6p(H), 3gis(B), 4boh(A), 6v5t(E).


 
11. Ligand: EDO × 11
1,2-Ethanediol
PDB codes: 4ud9(H), 4ue7(H), 5af9(H), 5do4(H), 5lce(H), 6gwe(A), 6t7h(A), 6yhj(L),


 
12. Ligand: NAG-NAG × 10
NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose.
PDB codes: 1jmo(H), 1k21(H), 1k22(H), 1xmn(B), 3e6p(H), 4bao(B), 5jdu(B), 6px5(B),


 
13. Ligand: MPD × 7
(4s)-2-Methyl-2,4-Pentanediol
PDB codes: 1jmo(H), 1tb6(H), 3p6z(B), 3u8r(L), 3u8t(H).


 
14. Ligand: MRD × 6
(4r)-2-Methylpentane-2,4-Diol
PDB codes: 3u69(H), 3u8o(H), 3u8r(H), 5do4(H).


 
15. Ligand: ACT × 5
Acetate ion
PDB codes: 4dy7(B), 4mlf(B),


 
16. Ligand: PEG × 5
Di(hydroxyethyl)ether
PDB codes: 3dd2(L), 5e8e(H),


 
17. Ligand: ASN-ASP-LYS-TYR-GLU-PRO-PHE-TRP-GLU × 2
PDB codes: 3bef(A),


 
18. Ligand: BU1 × 2
1,4-Butanediol
PDB codes: 3k65(B),


 
19. Ligand: GU3-GU2-GU6-GU1-GU5-GU8-GU9-GU8-GU9-GU8-GU9-GU8-GU5-GU0-GU6-GU4 × 2
GU3=Methyl 3-O-Methyl-2,6-Di-O-Sulfo-Alpha-D- Glucopyranoside, GU2=2,3-Di-O-Methyl-Alpha-L-Idopyranuronic acid, GU6=2,3,6-Tri-O-Sulfo-Alpha-D-Glucopyranose, GU1=2,3-Di-O-Methyl-Beta-D-Glucopyranuronic acid, GU5=2,3-Di-O-Methyl-6-O-Sulfonato-Alpha-D-Glucopyranose, GU8=2,3,6-Tri-O-Methyl-Beta-D-Glucopyranose, GU9=2,3,6-Tri-O-Methyl-Alpha-D-Glucopyranose, GU0=2,3,6-Tri-O-Sulfonato-Beta-D-Glucopyranose, GU4=2,3,4,6-Tetra-O-Sulfonato-Alpha-D-Glucopyranose.
PDB codes: 1tb6(H), 2b5t(B).


 
20. Ligand: MD8 × 2
(2~{s})-1-[(2~{r})-2-Azanyl-3-Phenyl-Propanoyl]-~{N}- [(4-Hydroxyphenyl)methyl]pyrrolidine-2-
Carboxamide
PDB codes: 6t3m(H),

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 Cluster 4 contains 1 ligand type

Selection shortcuts: select all/none invert selection.
Ligand Description


 
1. Ligand: NAG-BMA-MAN-BMA-BMA-NAG-BMA × 1
NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose, BMA=Beta-D-Mannopyranose, MAN=Alpha-D-Mannopyranose.
PDB code: 5to3(B).

 

 Cluster 5 contains 4 ligand types

Selection shortcuts: select all/none invert selection.
Ligand Description


 
1. Ligand: ACY × 1
acetic acid
Acetic acid
PDB code: 1jou(B).


 
2. Ligand: GOL × 1
glycerin
Glycerol
PDB code: 1rd3(B).


 
3. Ligand: ACT × 1
Acetate ion
PDB code: 4dt7(B).


 
4. Ligand: PO4 × 1
Phosphate ion
PDB code: 5e8e(H).

 

 Cluster 6 contains 3 ligand types

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Ligand Description


 
1. Ligand: GOL × 4
glycerin
Glycerol
PDB codes: 1rd3(B), 3jz2(B), 4ch2(B), 4ch8(B).


 
2. Ligand: MPD × 1
(4s)-2-Methyl-2,4-Pentanediol
PDB code: 1tb6(H).


 
3. Ligand: PO4 × 1
Phosphate ion
PDB code: 4h6t(A).

 

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