Ligand clusters for UniProt code P00459

Ligand clusters for P00459: Nitrogenase iron protein 1 OS=Azotobacter vinelandii OX=354 GN=nifH1 PE=1 SV=2

		3 ligand clusters Cluster 1. 7 ligand types 35 ligands Cluster 2. 1 ligand type 1 ligand Cluster 3. 2 ligand types 25 ligands
Representative protein: 1de0A

Structures

PDB		Schematic diagram
1de0A
6n4jA
2afiE
1xdbA
1m1yE
		more ...

Cluster 1 contains 7 ligand types

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Ligand		Description
		1. Ligand: ADP × 9 Adenosine-5'-Diphosphate PDB codes: 1fp6(A), 1m34(E), 1n2c(E), 1nip(A), 1xcp(A), 1xd9(A), 2afi(E),
		2. Ligand: ATP × 3 Adenosine-5'-Triphosphate PDB codes: 1g21(E), 2c8v(A).
_Mg		3. Metal: _MG × 13 PDB codes: 1fp6(A), 1g21(E), 1m34(E), 1n2c(E), 1nip(A), 1xcp(A), 1xd9(A), 2afi(E), 2c8v(A), 4wza(E), 4wzb(E), 6n4l(A), 6n4m(A).
		4. Ligand: ADP × 3 Adenosine-5'-Diphosphate PDB codes: 4wza(E), 6n4l(A), 6n4m(A).
		5. Ligand: ACP × 3 Phosphomethylphosphonic acid adenylate ester PDB codes: 4wza(E), 4wzb(E),
		6. Ligand: ALF × 3 Tetrafluoroaluminate ion PDB codes: 1m34(E), 1n2c(E).
		7. Ligand: ALF-ADP × 1 ALF=Tetrafluoroaluminate ion, ADP=Adenosine-5'-Diphosphate. PDB code: 1n2c(E).

Cluster 2 contains 1 ligand type

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Ligand		Description
		1. Ligand: PG4 × 1 Tetraethylene glycol PDB code: 2afh(E).

Cluster 3 contains 2 ligand types

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Ligand		Description
		1. Ligand: GOL × 1 glycerin Glycerol PDB code: 1rw4(A).
		2. Ligand: SF4 × 24 Iron/sulfur cluster PDB codes: 1de0(A), 1fp6(A), 1g1m(A), 1g20(E), 1g21(E), 1g5p(A), 1m1y(E), 1m34(E), 1n2c(E), 1nip(A), 1rw4(A), 1xcp(A), 1xd8(A), 1xd9(A), 1xdb(A), 2afh(E), 2afi(E), 2nip(A), 4wza(E), 4wzb(E), 6n4j(A), 6n4k(A), 6n4l(A), 6n4m(A).