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Ligand clusters for UniProt code P00432

Ligand clusters for P00432: Catalase from Bos taurus

3 ligand clusters
Cluster 1.
5 ligand types
18 ligands
Cluster 2.
3 ligand types
18 ligands
Cluster 3.
1 ligand type
12 ligands
Representative protein: 1tguA  
JSmol
 

Structures

PDB   Schematic diagram
1tguA    
3j7uA    
4blcA    
3nwlA    
6jnuA    
 more ...

 

 Cluster 1 contains 5 ligand types

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Ligand Description


 
1. Ligand: HEM × 14
Protoporphyrin IX containing fe
PDB codes: 1tgu(A), 4blc(A), 7cat(A), 8cat(A), 3j7b(A), 3j7u(A), 3nwl(A), 3re8(A), 5gkn(A), 6jnt(A), 6jnu(A), 6pm7(A), 6po0(A), 7di8(A).


 
2. Ligand: 3TR-HEM × 1
3TR=3-Amino-1,2,4-Triazole, HEM=Protoporphyrin IX containing fe.
PDB code: 1th4(A).


 
3. Ligand: AZI-HEM × 1
AZI=Azide ion, HEM=Protoporphyrin IX containing fe.
PDB code: 1th2(A).


 
4. Ligand: CYN-HEM × 1
CYN=Cyanide ion, HEM=Protoporphyrin IX containing fe.
PDB code: 1th3(A).


 
5. Ligand: HEM-NH3 × 1
HEM=Protoporphyrin IX containing fe, NH3=Ammonia.
PDB code: 3rgs(A).

 

 Cluster 2 contains 3 ligand types

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Ligand Description


 
1. Ligand: HEM × 16
Protoporphyrin IX containing fe
PDB codes: 1tgu(A), 1th2(A), 1th4(A), 4blc(A), 7cat(A), 8cat(A), 3j7b(A), 3j7u(A), 3nwl(A), 3re8(A), 5gkn(A), 6jnt(A), 6jnu(A), 6pm7(A), 6po0(A), 7di8(A).


 
2. Ligand: CYN-HEM × 1
CYN=Cyanide ion, HEM=Protoporphyrin IX containing fe.
PDB code: 1th3(A).


 
3. Ligand: HEM-NH3 × 1
HEM=Protoporphyrin IX containing fe, NH3=Ammonia.
PDB code: 3rgs(A).

 

 Cluster 3 contains 1 ligand type

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Ligand Description


 
1. Ligand: NDP × 12
Nadph dihydro-Nicotinamide-Adenine-Dinucleotide phosphate
PDB codes: 4blc(A), 3j7b(A), 3j7u(A), 3nwl(A), 5gkn(A), 6jnt(A), 6jnu(A), 6pm7(A), 6po0(A), 7cat(A), 7di8(A), 8cat(A).

 

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