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Ligand clusters for UniProt code P00390
Ligand clusters for P00390: Glutathione reductase, mitochondrial OS=Homo sapiens GN=GSR PE=1 SV=2
Top 6 (of 17) ligand clusters
Cluster 1.
22 ligand types
81 ligands
Cluster 2.
1 ligand type
2 ligands
Cluster 3.
3 ligand types
4 ligands
Cluster 4.
2 ligand types
2 ligands
Cluster 5.
1 ligand type
1 ligand
Cluster 6.
3 ligand types
3 ligands
Representative protein: 1k4qA
Structures
PDB
Schematic diagram
1k4q
A
1bwc
A
1gra
A
1grb
A
1dnc
A
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Cluster 1 contains 22 ligand types (of which only 20 are listed. Click
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Ligand
Description
1. Ligand:
FAD × 18
Flavin-Adenine dinucleotide
PDB codes:
1bwc
(A),
1dnc
(A),
1gra
(A),
1grb
(A),
1gre
(A),
1grf
(A),
1grg
(A),
1grt
(A),
1gsn
(A),
1xan
(A),
2aaq
(A),
2gh5
(A),
2grt
(A),
3grs
(A),
3grt
(A),
4gr1
(A),
4grt
(A),
5grt
(A).
2. Ligand:
NDP × 1
Nadph dihydro-Nicotinamide-Adenine-Dinucleotide phosphate
PDB code:
1gra
(A).
3. Ligand:
GDS × 1
Oxidized glutathione disulfide
PDB code:
2grt
(A).
4. Ligand:
GSH × 5
glutathione
Glutathione
PDB codes:
1dnc
(A),
1gre
(A),
1gsn
(A),
3dk8
(A).
5. Ligand:
TS2 × 1
2-Amino-4-[4-(4-Amino-4-Carboxy-Butyrylamino)-5,8,19, 22-Tetraoxo-1,2-Dithia-6,9,13,18,21-Pentaaza-
Cyclotetracos-23-Ylcarbamoyl]-Butyric acid
PDB code:
3grt
(A).
6. Ligand:
TS4 × 1
Glutathionylspermidine disulfide
PDB code:
5grt
(A).
7. Ligand:
RGS × 1
4n-Malonyl-Cysteinyl-2,4-Diaminobutyrate disulfide
PDB code:
4gr1
(A).
8. Ligand:
GCG × 1
Bis(gamma-Glutamyl-Cysteinyl-Glycinyl)spermidine
PDB code:
4grt
(A).
9. Ligand:
ELI × 1
6-(3-Methyl-1,4-Dioxo-1,4-Dihydronaphthalen-2-Yl) hexanoic acid
PDB code:
2gh5
(A).
10. Ligand:
ACM × 1
Acetamide
PDB code:
1grf
(A).
11. Ligand:
GOL × 5
Glycerol
PDB codes:
2aaq
(A),
2gh5
(A),
12. Ligand:
AJ3 × 1
3-(Prop-2-Ene-1-Sulfinyl)-Propene-1-Thiol
PDB code:
1bwc
(A).
13. Ligand:
PO4 × 13
Phosphate ion
PDB codes:
1dnc
(A),
1grb
(A),
1gre
(A),
1grf
(A),
1grg
(A),
1gsn
(A),
2aaq
(A),
2gh5
(A),
3grs
(A),
4gr1
(A).
14. Ligand:
FAD × 8
Flavin-Adenine dinucleotide
PDB codes:
1grh
(A),
1k4q
(A),
3djg
(X),
3djj
(A),
3dk4
(A),
3dk8
(A),
3dk9
(A),
3sqp
(A).
15. Ligand:
PO4 × 3
Phosphate ion
PDB codes:
1grh
(A),
3djj
(A),
16. Ligand:
GOL × 4
Glycerol
PDB codes:
3djj
(A),
3dk8
(A).
17. Ligand:
SO4 × 8
Sulfate ion
PDB codes:
3dk4
(A),
3dk8
(A),
3dk9
(A),
3sqp
(A),
18. Ligand:
NDP × 3
Nadph dihydro-Nicotinamide-Adenine-Dinucleotide phosphate
PDB codes:
3djg
(X),
3djj
(A),
3dk4
(A).
19. Ligand:
GSH-GSH × 2
GSH
=Glutathione.
PDB codes:
1gra
(A),
3dk4
(A).
20. Ligand:
NAD-NDP × 1
NAD
=Nicotinamide-Adenine-Dinucleotide,
NDP
=Nadph dihydro-Nicotinamide-Adenine-Dinucleotide phosphate.
PDB code:
1grb
(A).
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Cluster 2 contains 1 ligand type
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Ligand
Description
1. Ligand:
FAD × 2
Flavin-Adenine dinucleotide
PDB codes:
2gh5
(A),
3sqp
(A).
Cluster 3 contains 3 ligand types
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Ligand
Description
1. Ligand:
HXP × 1
3,6-Dihydroxy-Xanthene-9-Propionic acid
PDB code:
1xan
(A).
2. Ligand:
PO4 × 1
Phosphate ion
PDB code:
2aaq
(A).
3. Ligand:
3J8 × 2
5-Methylphenazin-1(5h)-One
PDB codes:
3sqp
(A),
Cluster 4 contains 2 ligand types
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Ligand
Description
1. Ligand:
AUP × 1
2-(2-Phenyl-3-Pyridin-2-Yl-4,5,6,7-Tetrahydro-2h- Isophosphindol-1-Yl)pyridine
PDB code:
2aaq
(A).
_Au
2. Metal:
_AU × 1
PDB code:
2aaq
(A).
Cluster 5 contains 1 ligand type
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Ligand
Description
1. Ligand:
ELI × 1
6-(3-Methyl-1,4-Dioxo-1,4-Dihydronaphthalen-2-Yl) hexanoic acid
PDB code:
2gh5
(A).
Cluster 6 contains 3 ligand types
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Ligand
Description
1. Ligand:
GOL × 1
Glycerol
PDB code:
3djj
(A).
2. Ligand:
PO4 × 1
Phosphate ion
PDB code:
3djj
(A).
_Cl
3. Metal:
_CL × 1
PDB code:
1bwc
(A).