Ligand clusters for UniProt code O00560

Ligand clusters for O00560: Syntenin-1 from Homo sapiens

		Top 6 (of 9) ligand clusters Cluster 1. 13 ligand types 15 ligands Cluster 2. 3 ligand types 5 ligands Cluster 3. 4 ligand types 7 ligands Cluster 4. 1 ligand type 1 ligand Cluster 5. 2 ligand types 2 ligands Cluster 6. 1 ligand type 1 ligand
Representative protein: 4z33A

Structures

PDB		Schematic diagram
4z33A
6r9hA
6rlcA
1obzA
1w9eA
		more ...

Cluster 1 contains 13 ligand types

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Ligand		Description
		1. Ligand: ASP-SER-VAL-PHE × 2 PDB codes: 1obx(A), 1obz(A).
		2. Ligand: THR-ASN-GLU-PHE-TYR-ALA × 2 PDB codes: 1oby(A), 1ybo(A).
		3. Ligand: ASN-GLU-PHE-TYR-ALA × 1 PDB code: 1oby(A).
		4. Ligand: ASN-GLU-PHE-TYR-PHE × 1 PDB code: 1w9e(A).
		5. Ligand: ASN-GLU-TYR-LYS-VAL × 1 PDB code: 1v1t(A).
		6. Ligand: ASN-GLU-TYR-TYR-VAL × 1 PDB code: 1w9o(A).
		7. Ligand: IP2 × 1 D-Myo-Inositol-4,5-Bisphosphate PDB code: 4z33(A).
		8. Ligand: JVK × 1 (2~{s})-2-[2-(4-Chlorophenyl)sulfanylethanoylamino]-3- Methyl-Butanoic acid PDB code: 6r9h(A).
		9. Ligand: K7Z × 1 (2~{s})-2-[3-(4-Chlorophenyl)sulfanylpropanoylamino]-3- Methyl-Butanoic acid PDB code: 6rlc(A).
		10. Ligand: LYS-GLY-GLU-THR-ALA-VAL × 1 PDB code: 4z33(A).
		11. Ligand: PO4 × 1 Phosphate ion PDB code: 6r9h(A).
		12. Ligand: SO4 × 1 Sulfate ion PDB code: 1obx(A).
_Co		13. Metal: _CO × 1 PDB code: 1obx(A).

Cluster 2 contains 3 ligand types

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Ligand		Description
		1. Ligand: GOL × 1 glycerin Glycerol PDB code: 4z33(A).
		2. Ligand: ACT × 3 Acetate ion PDB codes: 1obz(A), 6r9h(A), 6rlc(A).
		3. Ligand: GLU-PHE-TYR-PHE × 1 PDB code: 1w9e(A).

Cluster 3 contains 4 ligand types

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Ligand		Description
		1. Ligand: BEZ × 4 benzoic acid Benzoic acid PDB codes: 1v1t(A), 1w9e(A), 1w9o(A), 1w9q(A).
		2. Ligand: GOL × 1 glycerin Glycerol PDB code: 4z33(A).
		3. Ligand: PO4 × 1 Phosphate ion PDB code: 6r9h(A).
		4. Ligand: SO4 × 1 Sulfate ion PDB code: 1oby(A).

Cluster 4 contains 1 ligand type

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Ligand		Description
		1. Ligand: K7Z × 1 (2~{s})-2-[3-(4-Chlorophenyl)sulfanylpropanoylamino]-3- Methyl-Butanoic acid PDB code: 6rlc(A).

Cluster 5 contains 2 ligand types

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Ligand		Description
		1. Ligand: SO4 × 1 Sulfate ion PDB code: 1oby(A).
_Co		2. Metal: _CO × 1 PDB code: 1obx(A).

Cluster 6 contains 1 ligand type

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Ligand		Description
		1. Ligand: SO4 × 1 Sulfate ion PDB code: 1obx(A).