spacer
spacer

Ligand clusters for UniProt code B1MHW4

Ligand clusters for B1MHW4: Phosphoribosylaminoimidazole-succinocarboxamide synthase from Mycobacteroides abscessus (strain ATCC 19977 / DSM 44196 / CIP 104536 / JCM 13569 / NCTC 13031 / TMC 1543)

Top 6 (of 7) ligand clusters
Cluster 1.
12 ligand types
16 ligands
Cluster 2.
4 ligand types
23 ligands
Cluster 3.
2 ligand types
4 ligands
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
2 ligands
Cluster 6.
1 ligand type
3 ligands
Representative protein: 6yx3A  
JSmol
 

Structures

PDB   Schematic diagram
6yx3A    
6yy9A    
6yvqA    
6yy6A    
6yy7A    
 more ...

 

 Cluster 1 contains 12 ligand types

Use checkboxes to select ligands to display in RasMol, Jmol, or download as an SDF file.
Selection shortcuts: select all/none invert selection.
Ligand Description


 
1. Ligand: SO4 × 5
Sulfate ion
PDB codes: 6yvq(A), 6yy6(A), 6yy7(A), 6yy8(A), 6yy9(A).


 
2. Ligand: ATP × 1
Adenosine-5'-Triphosphate
PDB code: 6yx3(A).


 
3. Ligand: PZK × 1
4-Azanyl-6-[1-[(3-Fluorophenyl)methyl]pyrazol-4- Yl]pyrimidine-5-Carbonitrile
PDB code: 6yya(A).


 
4. Ligand: Q0E × 1
4-Azanyl-6-[1-(Pyridin-3-Ylmethyl)pyrazol-4- Yl]pyrimidine-5-Carbonitrile
PDB code: 6yy9(A).


 
5. Ligand: Q0H × 1
4-Azanyl-6-[1-[[3,4-Bis(fluoranyl) phenyl]methyl]pyrazol-4-Yl]pyrimidine-5-Carbonitrile
PDB code: 6yyd(A).


 
6. Ligand: Q0N × 1
4-Azanyl-6-[1-(2-Morpholin-4-Ylethyl)pyrazol-4- Yl]pyrimidine-5-Carbonitrile
PDB code: 6yy8(A).


 
7. Ligand: Q0Q × 1
4-Azanyl-6-[1-[(1~{r})-1-Phenylethyl]pyrazol-4- Yl]pyrimidine-5-Carbonitrile
PDB code: 6yyb(A).


 
8. Ligand: Q0T × 1
Ethyl 2-[4-(6-Azanyl-5-Cyano-Pyrimidin-4-Yl)pyrazol-1- Yl]ethanoate
PDB code: 6yy7(A).


 
9. Ligand: Q0W × 1
4-Azanyl-6-(1-Ethylpyrazol-4-Yl)pyrimidine-5- Carbonitrile
PDB code: 6yy6(A).


 
10. Ligand: Q0Z × 1
5-Chloranyl-6-[1-[(3-Fluorophenyl)methyl]pyrazol-4- Yl]pyrimidin-4-Amine
PDB code: 6yyc(A).


 
11. Ligand: Q4H × 1
4-Azanylpyrimidine-5-Carbonitrile
PDB code: 6z0r(A).


 
12. Ligand: Q4K × 1
Ethyl (2~{s},3~{r})-3-(5-Bromanylpyridin-2-Yl)-2- Fluoranyl-3-Oxidanyl-Propanoate
PDB code: 6z0q(A).

 

 Cluster 2 contains 4 ligand types

Selection shortcuts: select all/none invert selection.
Ligand Description


 
1. Ligand: SO4 × 12
Sulfate ion
PDB codes: 6yvq(A), 6yx3(A), 6yy6(A), 6yy7(A), 6yy8(A), 6yy9(A), 6yya(A), 6yyb(A), 6yyc(A), 6yyd(A), 6z0q(A), 6z0r(A).


 
2. Ligand: EDO × 9
1,2-Ethanediol
PDB codes: 6yvq(A), 6yy6(A), 6yy7(A), 6yy8(A), 6yy9(A), 6yya(A), 6yyc(A), 6yyd(A), 6z0r(A).


 
3. Ligand: MRD × 1
(4r)-2-Methylpentane-2,4-Diol
PDB code: 3r9r(A).

_Cl
 
4. Metal: _CL × 1
PDB code: 3r9r(A).

 

 Cluster 3 contains 2 ligand types

Selection shortcuts: select all/none invert selection.
Ligand Description

_Mg
 
1. Metal: _MG × 1
PDB code: 3r9r(A).


 
2. Ligand: EDO × 3
1,2-Ethanediol
PDB codes: 6yvq(A), 6yy7(A), 6yy8(A).

 

 Cluster 4 contains 1 ligand type

Selection shortcuts: select all/none invert selection.
Ligand Description


 
1. Ligand: SO4 × 1
Sulfate ion
PDB code: 6yx3(A).

 

 Cluster 5 contains 1 ligand type

Selection shortcuts: select all/none invert selection.
Ligand Description


 
1. Ligand: SO4 × 2
Sulfate ion
PDB codes: 6yx3(A), 6yya(A).

 

 Cluster 6 contains 1 ligand type

Selection shortcuts: select all/none invert selection.
Ligand Description


 
1. Ligand: EDO × 3
1,2-Ethanediol
PDB codes: 6yvq(A), 6yya(A), 6z0r(A).

 

spacer

spacer