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Ligand clusters for UniProt code B1MHW4
Ligand clusters for B1MHW4: Phosphoribosylaminoimidazole-succinocarboxamide synthase from Mycobacteroides abscessus (strain ATCC 19977 / DSM 44196 / CIP 104536 / JCM 13569 / NCTC 13031 / TMC 1543)
Top 6 (of 7) ligand clusters
Cluster 1.
12 ligand types
16 ligands
Cluster 2.
4 ligand types
23 ligands
Cluster 3.
2 ligand types
4 ligands
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
2 ligands
Cluster 6.
1 ligand type
3 ligands
Representative protein: 6yx3A
Structures
PDB
Schematic diagram
6yx3
A
6yy9
A
6yvq
A
6yy6
A
6yy7
A
more ...
Cluster 1 contains 12 ligand types
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Ligand
Description
1. Ligand:
SO4 × 5
Sulfate ion
PDB codes:
6yvq
(A),
6yy6
(A),
6yy7
(A),
6yy8
(A),
6yy9
(A).
2. Ligand:
ATP × 1
Adenosine-5'-Triphosphate
PDB code:
6yx3
(A).
3. Ligand:
PZK × 1
4-Azanyl-6-[1-[(3-Fluorophenyl)methyl]pyrazol-4- Yl]pyrimidine-5-Carbonitrile
PDB code:
6yya
(A).
4. Ligand:
Q0E × 1
4-Azanyl-6-[1-(Pyridin-3-Ylmethyl)pyrazol-4- Yl]pyrimidine-5-Carbonitrile
PDB code:
6yy9
(A).
5. Ligand:
Q0H × 1
4-Azanyl-6-[1-[[3,4-Bis(fluoranyl) phenyl]methyl]pyrazol-4-Yl]pyrimidine-5-Carbonitrile
PDB code:
6yyd
(A).
6. Ligand:
Q0N × 1
4-Azanyl-6-[1-(2-Morpholin-4-Ylethyl)pyrazol-4- Yl]pyrimidine-5-Carbonitrile
PDB code:
6yy8
(A).
7. Ligand:
Q0Q × 1
4-Azanyl-6-[1-[(1~{r})-1-Phenylethyl]pyrazol-4- Yl]pyrimidine-5-Carbonitrile
PDB code:
6yyb
(A).
8. Ligand:
Q0T × 1
Ethyl 2-[4-(6-Azanyl-5-Cyano-Pyrimidin-4-Yl)pyrazol-1- Yl]ethanoate
PDB code:
6yy7
(A).
9. Ligand:
Q0W × 1
4-Azanyl-6-(1-Ethylpyrazol-4-Yl)pyrimidine-5- Carbonitrile
PDB code:
6yy6
(A).
10. Ligand:
Q0Z × 1
5-Chloranyl-6-[1-[(3-Fluorophenyl)methyl]pyrazol-4- Yl]pyrimidin-4-Amine
PDB code:
6yyc
(A).
11. Ligand:
Q4H × 1
4-Azanylpyrimidine-5-Carbonitrile
PDB code:
6z0r
(A).
12. Ligand:
Q4K × 1
Ethyl (2~{s},3~{r})-3-(5-Bromanylpyridin-2-Yl)-2- Fluoranyl-3-Oxidanyl-Propanoate
PDB code:
6z0q
(A).
Cluster 2 contains 4 ligand types
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Ligand
Description
1. Ligand:
SO4 × 12
Sulfate ion
PDB codes:
6yvq
(A),
6yx3
(A),
6yy6
(A),
6yy7
(A),
6yy8
(A),
6yy9
(A),
6yya
(A),
6yyb
(A),
6yyc
(A),
6yyd
(A),
6z0q
(A),
6z0r
(A).
2. Ligand:
EDO × 9
1,2-Ethanediol
PDB codes:
6yvq
(A),
6yy6
(A),
6yy7
(A),
6yy8
(A),
6yy9
(A),
6yya
(A),
6yyc
(A),
6yyd
(A),
6z0r
(A).
3. Ligand:
MRD × 1
(4r)-2-Methylpentane-2,4-Diol
PDB code:
3r9r
(A).
_Cl
4. Metal:
_CL × 1
PDB code:
3r9r
(A).
Cluster 3 contains 2 ligand types
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Ligand
Description
_Mg
1. Metal:
_MG × 1
PDB code:
3r9r
(A).
2. Ligand:
EDO × 3
1,2-Ethanediol
PDB codes:
6yvq
(A),
6yy7
(A),
6yy8
(A).
Cluster 4 contains 1 ligand type
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Ligand
Description
1. Ligand:
SO4 × 1
Sulfate ion
PDB code:
6yx3
(A).
Cluster 5 contains 1 ligand type
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Ligand
Description
1. Ligand:
SO4 × 2
Sulfate ion
PDB codes:
6yx3
(A),
6yya
(A).
Cluster 6 contains 1 ligand type
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Ligand
Description
1. Ligand:
EDO × 3
1,2-Ethanediol
PDB codes:
6yvq
(A),
6yya
(A),
6z0r
(A).