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Title:	Dbfetch Help and Documentation
Author:	Nandana Madhusoodanan	Mar 27, 2019
Last Changed by:	Fabio Madeira	Oct 05, 2020
Tiny Link: (useful for email)	https://www.ebi.ac.uk/seqdb/confluence/x/swLKBQ
Export As:	Word · PDF

Job Dispatcher Sequence Analysis Tools (1)     Page: EMBL-EBI Web Services APIs - Data Retrieval

Parent Page     Page: EMBL-EBI Web Services APIs - Data Retrieval

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Time	Editor
Oct 05, 2020 13:47	Fabio Madeira	View Changes
Added 2019 paper
Apr 24, 2019 14:23	Nandana Madhusoodanan	View Changes
Apr 24, 2019 14:22	Nandana Madhusoodanan	View Changes
Apr 23, 2019 11:35	Fabio Madeira	View Changes
Added info note
Apr 05, 2019 08:35	Fabio Madeira

External Links (101)
    https://www.ebi.ac.uk/seqdb/confluence/display/JDSAT/Sequen…
    www.ebi.ac.uk/Tools/dbfetch/dbfetch/dbfetch.databases#nrpl2
    www.ebi.ac.uk/Tools/dbfetch/dbfetch/dbfetch.databases#nrpl1
    search.cpan.org/perldoc?YAML::Syck
    https://www.ebi.ac.uk/seqdb/confluence/display/JDSAT/Sequen…
    https://www.ebi.ac.uk/Tools/dbfetch/faq.jsp
    www.ebi.ac.uk/ws/services/WSDbfetchDoclit?sawsdl
    edamontology.org/page
    www.ebi.ac.uk/Tools/dbfetch/dbfetch/dbfetch.databases#unire…
    www.myexperiment.org/
    https://www.ebi.ac.uk/seqdb/confluence/display/JDSAT/Job+Di…
    www.ebi.ac.uk/Tools/dbfetch/help.jsp
    www.ebi.ac.uk/Tools/dbfetch/dbfetch/dbfetch.databases#iprmc
    www.w3.org/TR/sawsdl/
    www.ebi.ac.uk/Tools/dbfetch/dbfetch/dbfetch.databases#uspto…
    www.ebi.ac.uk/Tools/dbfetch/dbfetch/dbfetch.databases#unire…
    dx.doi.org/10.1093/nar/gkt376
    www.ebi.ac.uk/Tools/dbfetch/dbfetch/dbfetch.databases#sgt
    www.ebi.ac.uk/Tools/dbfetch/dbfetch/dbfetch.databases#imgtl…
    https://www.ebi.ac.uk/seqdb/confluence/pages/viewpage.actio…
    www.ebi.ac.uk/Tools/dbfetch/dbfetch/dbfetch.databases#ensem…
    https://www.ebi.ac.uk/seqdb/confluence/pages/viewpage.actio…
    https://www.ebi.ac.uk/seqdb/confluence/display/JDSAT/Sequen…
    www.ebi.ac.uk/ws/services/WSDbfetch?wsdl
    www.ebi.ac.uk/Tools/dbfetch/dbfetch/dbfetch.databases#ena_s…
    https://www.ebi.ac.uk/seqdb/confluence/display/JDSAT/Sequen…
    www.ebi.ac.uk/Tools/dbfetch/syntax.jsp
    https://www.ebi.ac.uk/ebisearch/search.ebi?db=literature&qu…
    www.ebi.ac.uk/Tools/dbfetch/dbfetch/dbfetch.databases#ipdki…
    https://github.com/ebi-wp/webservice-clients/blob/master/py…
    dx.doi.org/10.1093/nar/gkz268
    www.ebi.ac.uk/about/terms-of-use
    www.ebi.ac.uk/Tools/dbfetch/dbfetch/dbfetch.databases#edam
    www.ebi.ac.uk/Tools/dbfetch/dbfetch/dbfetch.databases#paten…
    https://github.com/ebi-wp/webservice-clients/blob/master/pe…
    dx.doi.org/10.1002/0471250953.bi0312s48
    www.ebi.ac.uk/Tools/dbfetch/dbfetch/dbfetch.databases#unipr…
    https://www.ebi.ac.uk/support/webservices
    europepmc.org/abstract/MED/23671338
    www.ebi.ac.uk/Tools/dbfetch/dbfetch/dbfetch.databases#taxon…
    https://www.ebi.ac.uk/Tools/dbfetch/help.jsp
    https://www.ebi.ac.uk/Tools/dbfetch/
    www.ebi.ac.uk/Tools/dbfetch/dbfetch/dbfetch.databases#jpo_p…
    https://www.ebi.ac.uk/seqdb/confluence/pages/viewpage.actio…
    www.ebi.ac.uk/Tools/dbfetch/faq.jsp
    www.ebi.ac.uk/Tools/dbfetch/dbfetch/dbfetch.databases#pdb
    www.ebi.ac.uk/Tools/dbfetch/dbfetch/dbfetch.databases#medli…
    www.ebi.ac.uk/Tools/dbfetch/dbfetch/dbfetch.databases#nrnl2
    www.ebi.ac.uk/Tools/dbfetch/dbfetch/dbfetch.databases#nrnl1
    https://pypi.org/project/xmltramp2/3.0.10/
    https://github.com/ebi-wp/webservice-clients
    www.ebi.ac.uk/Tools/dbfetch/dbfetch/dbfetch.databases#kipo_…
    www.ebi.ac.uk/Tools/dbfetch/dbfetch/dbfetch.databases#hgnc
    https://www.ebi.ac.uk/seqdb/confluence/display/JDSAT/Sequen…
    www.ebi.ac.uk/Tools/dbfetch/dbfetch/dbfetch.databases#ena_n…
    www.w3.org/TR/wsdl
    europepmc.org/abstract/MED/30976793
    www.ebi.ac.uk/Tools/dbfetch/dbfetch/dbfetch.databases#inter…
    https://www.ebi.ac.uk/seqdb/confluence/display/JDSAT/CWL+Wo…
    www.ebi.ac.uk/Tools/dbfetch/dbfetch/dbfetch.databases#ensem…
    www.ebi.ac.uk/ws/services/urn:Dbfetch?wsdl
    www.bioperl.org/
    www.ebi.ac.uk/Tools/dbfetch/dbfetch/dbfetch.databases#unire…
    search.cpan.org/perldoc?LWP
    www.ebi.ac.uk/Tools/dbfetch/dbfetch?wadl
    mango.ctegd.uga.edu/jkissingLab/
    https://github.com/obi-webservice/OBIws
    www.ebi.ac.uk/Tools/dbfetch/dbfetch/dbfetch.databases#ena_c…
    www.ebi.ac.uk/Tools/dbfetch/dbfetch/dbfetch.databases#ipdmh…
    www.ebi.ac.uk/Tools/dbfetch/dbfetch/dbfetch.databases#ena_s…
    www.ebi.ac.uk/Tools/dbfetch/dbfetch/dbfetch.databases#epo_p…
    https://www.ebi.ac.uk/seqdb/confluence/display/JDSAT/Enviro…
    www.ebi.ac.uk/Tools/dbfetch/dbfetch/dbfetch.databases#ensem…
    www.ebi.ac.uk/Tools/dbfetch/dbfetch/dbfetch.databases#trace…
    www.ebi.ac.uk/Tools/dbfetch/dbfetch/dbfetch.databases#unisa…
    www.ebi.ac.uk/Tools/dbfetch/dbfetch/dbfetch.databases#ena_s…
    www.myexperiment.org/workflows?filter=WSDL_ENDPOINT%28%22ht…
    https://www.ebi.ac.uk/Tools/dbfetch/syntax.jsp
    https://www.ebi.ac.uk/seqdb/confluence/display/JDSAT/Sequen…
    www.ebi.ac.uk/Tools/dbfetch/dbfetch/dbfetch.databases#ena_s…
    www.ebi.ac.uk/Tools/dbfetch/dbfetch/dbfetch.databases
    mango.ctegd.uga.edu/jkissingLab/SWS/Wsannotation/resources/…
    www.ebi.ac.uk/Tools/dbfetch/dbfetch/dbfetch.databases#imgth…
    www.biopython.org/
    www.ebi.ac.uk/Tools/dbfetch/dbfetch/dbfetch.databases#ensem…
    https://www.ebi.ac.uk/seqdb/confluence/display/JDSAT/Exampl…
    www.ebi.ac.uk/miriam/
    www.ebi.ac.uk/Tools/dbfetch/dbfetch/dbfetch.databases#ena_g…
    www.ebi.ac.uk/Tools/dbfetch/dbfetch/dbfetch.databases#unipa…
    www.ebi.ac.uk/Tools/dbfetch/dbfetch/dbfetch.databases#refse…
    https://www.ebi.ac.uk/seqdb/confluence/display/JDSAT/Refere…
    www.ebi.ac.uk/Tools/dbfetch/dbfetch/dbfetch.databases#refse…
    www.ebi.ac.uk/Tools/dbfetch/dbfetch/dbfetch.databases#iprmc…
    https://wadl.java.net/
    https://github.com/ebi-wp/webservice-cwl
    www.emboss.org/
    www.bioruby.org/
    www.ebi.ac.uk/ws/services/WSDbfetchDoclit?wsdl
    www.ebi.ac.uk/Tools/dbfetch/dbfetch/application.wadl
    drcat.sourceforge.net/
    www.biojava.org/