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PDBsum entry 6m3c

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protein Protein-protein interface(s) links
Blood clotting/immune system PDB id
6m3c

 

 

 

 

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Contents
Protein chains
239 a.a.
53 a.a.
218 a.a.
221 a.a.
PDB id:
6m3c
Name: Blood clotting/immune system
Title: Hapc-h1573 fab complex
Structure: Vitamin k-dependent protein c heavy chain. Chain: a, c, g. Synonym: anticoagulant protein c,autoprothrombin iia,blood coagulation factor xiv. Engineered: yes. Vitamin k-dependent protein c light chain. Chain: b, d, i. Synonym: anticoagulant protein c,autoprothrombin iia,blood coagulation factor xiv.
Source: Homo sapiens. Human. Organism_taxid: 9606. Gene: proc. Expressed in: homo sapiens. Expression_system_taxid: 9606. Expressed in: cricetulus griseus. Expression_system_taxid: 10029. Expression_system_taxid: 10029
Resolution:
3.70Å     R-factor:   0.280     R-free:   0.302
Authors: X.Wang,D.Wang,X.Zhao,U.Egner
Key ref: X.Y.Zhao et al. (2020). Targeted inhibition of activated protein C by a non-active-site inhibitory antibody to treat hemophilia. Nat Commun, 11, 2992. PubMed id: 32532974 DOI: 10.1038/s41467-020-16720-9
Date:
03-Mar-20     Release date:   08-Jul-20    
PROCHECK
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 Headers
 References

Protein chains
Pfam   ArchSchema ?
P04070  (PROC_HUMAN) -  Vitamin K-dependent protein C from Homo sapiens
Seq:
Struc:
461 a.a.
239 a.a.
Protein chains
Pfam   ArchSchema ?
P04070  (PROC_HUMAN) -  Vitamin K-dependent protein C from Homo sapiens
Seq:
Struc:
461 a.a.
53 a.a.
Protein chains
No UniProt id for this chain
Struc: 218 a.a.
Protein chains
No UniProt id for this chain
Struc: 221 a.a.
Key:    PfamA domain  Secondary structure

 Enzyme reactions 
   Enzyme class: Chains A, B, C, D, G, I: E.C.3.4.21.69  - activated protein C (thrombin-activated peptidase).
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]
      Reaction: Degradation of blood coagulation factors Va and VIIIa.

 

 
DOI no: 10.1038/s41467-020-16720-9 Nat Commun 11:2992 (2020)
PubMed id: 32532974  
 
 
Targeted inhibition of activated protein C by a non-active-site inhibitory antibody to treat hemophilia.
X.Y.Zhao, A.Wilmen, D.Wang, X.Wang, M.Bauzon, J.Y.Kim, L.Linden, L.Li, U.Egner, T.Marquardt, D.Moosmayer, J.Tebbe, J.M.Glück, P.Ellinger, K.McLean, S.Yuan, S.Yegneswaran, X.Jiang, V.Evans, J.M.Gu, D.Schneider, Y.Zhu, Y.Xu, C.Mallari, A.Hesslein, Y.Wang, N.Schmidt, K.Gutberlet, C.Ruehl-Fehlert, A.Freyberger, T.Hermiston, C.Patel, D.Sim, L.O.Mosnier, V.Laux.
 
  ABSTRACT  
 
Activated protein C (APC) is a plasma serine protease with antithrombotic and cytoprotective functions. Based on the hypothesis that specific inhibition of APC's anticoagulant but not its cytoprotective activity can be beneficial for hemophilia therapy, 2 types of inhibitory monoclonal antibodies (mAbs) are tested: A type I active-site binding mAb and a type II mAb binding to an exosite on APC (required for anticoagulant activity) as shown by X-ray crystallography. Both mAbs increase thrombin generation and promote plasma clotting. Type I blocks all APC activities, whereas type II preserves APC's cytoprotective function. In normal monkeys, type I causes many adverse effects including animal death. In contrast, type II is well-tolerated in normal monkeys and shows both acute and prophylactic dose-dependent efficacy in hemophilic monkeys. Our data show that the type II mAb can specifically inhibit APC's anticoagulant function without compromising its cytoprotective function and offers superior therapeutic opportunities for hemophilia.
 

 

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