› 5upb

X-ray diffraction
1.91Å resolution

Swit_4259, an Acetoacetate Decarboxylase-like Enzyme from Sphingomonas wittichii RW1

Released:
DOI: 10.2210/pdb5upb/pdb
PDB entry 5upb coloured by chain, front view.
PDB entry 5upb coloured by chain, side view.
PDB entry 5upb coloured by chain, top view.
Source organism: Rhizorhabdus wittichii RW1
Primary publication:
Swit_4259, an acetoacetate decarboxylase-like enzyme from Sphingomonas wittichii RW1.
Mydy LS, Mashhadi Z, Knight TW, Fenske T, Hagemann T, Hoppe RW, Han L, Miller TR, Schwabacher AW, Silvaggi NR
Acta Crystallogr F Struct Biol Commun 73 672-681 (2017)
PMID: 29199988

Function and Biology Details

Biochemical function:
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
homo tetramer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-166174 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Acetoacetate decarboxylase Chains: A, B, C, D
Molecule details ›
Chains: A, B, C, D
Length: 258 amino acids
Theoretical weight: 27.72 KDa
Source organism: Rhizorhabdus wittichii RW1
Expression system: Escherichia coli

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: APS BEAMLINE 21-ID-F
Spacegroup: P32
Unit cell:
a: 75.04Å b: 75.04Å c: 179.85Å
α: 90° β: 90° γ: 120°
R-values:
R R work R free
0.173 0.172 0.201
Expression system: Escherichia coli

Quick links

Citations

1 citations in other articles

Physiological role of isocitrate lyase in dibenzo-p-dioxin and dibenzofuran metabolism by Sphingomonas wittichii RW1.
Faisal et al. (2022)

1 mention without citation

Swit_4259, an acetoacetate decarboxylase-like enzyme from Sphingomonas wittichii RW1.
Mydy et al. (2017)