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Structure of COI1-ASK1 in complex with JA-isoleucine and the JAZ1 degron

X-ray diffraction
3.18Å resolution
PDB entry 3ogl coloured by chain, front view.
PDB entry 3ogl coloured by chain, side view.
PDB entry 3ogl coloured by chain, top view.
Source organism: Arabidopsis thaliana
Assemblies composition:
hetero trimer (preferred)
hetero dimer
Entry contents: 3 distinct polypeptide molecules

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Assemblies

Assembly 1 (preferred)
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Multimeric state: hetero trimer
Accessible surface area: 30836.41 Å2
Buried surface area: 7057.97 Å2
Dissociation area: 1,833.51 Å2
Dissociation energy (ΔGdiss): 15.12 kcal/mol
Dissociation entropy (TΔSdiss): 13.15 kcal/mol
Symmetry number: 1
PDBe Complex ID: PDB-CPX-126437
Assembly 2
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Multimeric state: hetero trimer
Accessible surface area: 30835.07 Å2
Buried surface area: 7121.63 Å2
Dissociation area: 1,872.88 Å2
Dissociation energy (ΔGdiss): 16.44 kcal/mol
Dissociation entropy (TΔSdiss): 13.15 kcal/mol
Symmetry number: 1
PDBe Complex ID: PDB-CPX-126437
Assembly 3
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Multimeric state: hetero trimer
Accessible surface area: 30840.47 Å2
Buried surface area: 7069.28 Å2
Dissociation area: 1,848.28 Å2
Dissociation energy (ΔGdiss): 14.74 kcal/mol
Dissociation entropy (TΔSdiss): 13.16 kcal/mol
Symmetry number: 1
PDBe Complex ID: PDB-CPX-126437
Assembly 4
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Assembly Name: Coronatine-insensitive protein 1 and SKP1-like protein 1A
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Multimeric state: hetero dimer
Accessible surface area: 30951.26 Å2
Buried surface area: 4520.21 Å2
Dissociation area: 1,829.08 Å2
Dissociation energy (ΔGdiss): 13.86 kcal/mol
Dissociation entropy (TΔSdiss): 13.14 kcal/mol
Symmetry number: 1
PDBe Complex ID: PDB-CPX-126436
Assembly 5
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Multimeric state: hetero trimer
Accessible surface area: 30765.58 Å2
Buried surface area: 7105.31 Å2
Dissociation area: 1,854.19 Å2
Dissociation energy (ΔGdiss): 15.3 kcal/mol
Dissociation entropy (TΔSdiss): 13.15 kcal/mol
Symmetry number: 1
PDBe Complex ID: PDB-CPX-126437
Assembly 6
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Multimeric state: hetero trimer
Accessible surface area: 30820.7 Å2
Buried surface area: 7101.36 Å2
Dissociation area: 1,854.49 Å2
Dissociation energy (ΔGdiss): 15.85 kcal/mol
Dissociation entropy (TΔSdiss): 13.15 kcal/mol
Symmetry number: 1
PDBe Complex ID: PDB-CPX-126437
Assembly 7
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Multimeric state: hetero trimer
Accessible surface area: 30661.57 Å2
Buried surface area: 7261.6 Å2
Dissociation area: 1,934.06 Å2
Dissociation energy (ΔGdiss): 17.2 kcal/mol
Dissociation entropy (TΔSdiss): 13.16 kcal/mol
Symmetry number: 1
PDBe Complex ID: PDB-CPX-126437
Assembly 8
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Multimeric state: hetero trimer
Accessible surface area: 30829.34 Å2
Buried surface area: 7123.63 Å2
Dissociation area: 1,866.45 Å2
Dissociation energy (ΔGdiss): 15.47 kcal/mol
Dissociation entropy (TΔSdiss): 13.17 kcal/mol
Symmetry number: 1
PDBe Complex ID: PDB-CPX-126437

Macromolecules

SKP1-like protein 1A
Chains: A, C, E, G, I, K, M, O
Length: 160 amino acids
Theoretical weight: 17.88 KDa
Source organism: Arabidopsis thaliana
Expression system: Spodoptera frugiperda
UniProt:
  • Canonical: Q39255 (Residues: 1-160; Coverage: 100%)
Gene names: ASK1, At1g75950, SKP1, SKP1A, T4O12.17, UIP1
Pfam:
InterPro:
CATH: Potassium Channel Kv1.1; Chain A
SKP1-like protein 1A in PDB entry 3ogl, assembly 1, front view.
SKP1-like protein 1A in PDB entry 3ogl, assembly 1, side view.
SKP1-like protein 1A in PDB entry 3ogl, assembly 1, top view.
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Coronatine-insensitive protein 1
Chains: B, D, F, H, J, L, N, P
Length: 592 amino acids
Theoretical weight: 67.75 KDa
Source organism: Arabidopsis thaliana
Expression system: Spodoptera frugiperda
UniProt:
  • Canonical: O04197 (Residues: 1-592; Coverage: 100%)
Gene names: At2g39940, COI1, FBL2, T28M21.10
Pfam:
InterPro:
CATH:
Coronatine-insensitive protein 1 in PDB entry 3ogl, assembly 1, front view.
Coronatine-insensitive protein 1 in PDB entry 3ogl, assembly 1, side view.
Coronatine-insensitive protein 1 in PDB entry 3ogl, assembly 1, top view.
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Protein TIFY 10A
Chains: Q, R, S, U, V, W, X
Length: 21 amino acids
Theoretical weight: 2.6 KDa
Source organism: Arabidopsis thaliana
Expression system: Not provided
UniProt:
  • Canonical: Q9LMA8 (Residues: 200-220; Coverage: 8%)
Gene names: At1g19180, JAZ1, T29M8.5, TIFY10A
Pfam: Jas motif
InterPro: CO/COL/TOC1, conserved site
Protein TIFY 10A in PDB entry 3ogl, assembly 1, front view.
Protein TIFY 10A in PDB entry 3ogl, assembly 1, side view.
Protein TIFY 10A in PDB entry 3ogl, assembly 1, top view.
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