Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : YOV    

Bonds between two atoms of the molecule

Total Number of Bonds: 41


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C04 N02 C N sing 1.47 N N
2 C04 C05 C C sing 1.53 N N
3 C03 N02 C N sing 1.47 N N
4 C01 N02 C N sing 1.47 N N
5 C05 C06 C C sing 1.51 N N
6 C06 C21 C C doub 1.38 N Y
7 C06 C07 C C sing 1.38 N Y
8 C21 C20 C C sing 1.38 N Y
9 C07 C08 C C doub 1.38 N Y
10 C20 C09 C C doub 1.39 N Y
11 C08 C09 C C sing 1.39 N Y
12 C09 N10 C N sing 1.4 N N
13 N10 C11 N C sing 1.39 N N
14 C12 C11 C C sing 1.41 N N
15 C12 N13 C N doub 1.3 N N
16 C11 C18 C C doub 1.38 N N
17 N13 N14 N N sing 1.4 N N
18 C18 CL19 C CL sing 1.74 N N
19 C18 C16 C C sing 1.4 N N
20 N14 C16 N C sing 1.35 N N
21 N14 C15 N C sing 1.47 N N
22 C16 O17 C O doub 1.22 N N
23 C01 H1 C H sing 1.09 N N
24 C01 H2 C H sing 1.09 N N
25 C01 H3 C H sing 1.09 N N
26 C03 H4 C H sing 1.09 N N
27 C03 H5 C H sing 1.09 N N
28 C03 H6 C H sing 1.09 N N
29 C04 H7 C H sing 1.09 N N
30 C04 H8 C H sing 1.09 N N
31 C05 H9 C H sing 1.09 N N
32 C05 H10 C H sing 1.09 N N
33 C07 H11 C H sing 1.08 N N
34 C08 H12 C H sing 1.08 N N
35 C12 H13 C H sing 1.08 N N
36 C15 H14 C H sing 1.09 N N
37 C15 H15 C H sing 1.09 N N
38 C15 H16 C H sing 1.09 N N
39 C20 H17 C H sing 1.08 N N
40 C21 H18 C H sing 1.08 N N
41 N10 H20 N H sing 0.97 N N