data_YOV # _chem_comp.id YOV _chem_comp.name 4-chloro-5-{4-[2-(dimethylamino)ethyl]anilino}-2-methylpyridazin-3(2H)-one _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C15 H19 Cl N4 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2021-03-18 _chem_comp.pdbx_modified_date 2022-02-11 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 306.791 _chem_comp.one_letter_code ? _chem_comp.three_letter_code YOV _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7M2E _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal YOV C01 C1 C 0 1 N N N N N N 3.946 -3.682 -4.085 7.159 1.132 -0.848 C01 YOV 1 YOV C03 C2 C 0 1 N N N N N N 2.399 -1.883 -4.101 6.418 1.217 1.456 C03 YOV 2 YOV C04 C3 C 0 1 N N N N N N 4.730 -1.444 -4.197 4.952 0.331 -0.255 C04 YOV 3 YOV C05 C4 C 0 1 N N N N N N 6.106 -1.808 -3.635 4.198 -0.564 0.729 C05 YOV 4 YOV C06 C5 C 0 1 Y N N N N N 6.253 -1.426 -2.163 2.769 -0.717 0.276 C06 YOV 5 YOV C07 C6 C 0 1 Y N N N N N 6.489 -2.408 -1.209 1.809 0.181 0.705 C07 YOV 6 YOV C08 C7 C 0 1 Y N N N N N 6.623 -2.073 0.132 0.498 0.043 0.292 C08 YOV 7 YOV C09 C8 C 0 1 Y N N N N N 6.519 -0.747 0.518 0.145 -0.998 -0.557 C09 YOV 8 YOV C11 C9 C 0 1 N N N N N N 6.214 -1.137 3.057 -2.111 -0.158 -0.680 C11 YOV 9 YOV C12 C10 C 0 1 N N N N N N 5.351 -2.194 2.851 -1.911 1.168 -1.118 C12 YOV 10 YOV C15 C11 C 0 1 N N N N N N 4.961 -3.495 6.243 -4.909 2.860 0.180 C15 YOV 11 YOV C16 C12 C 0 1 N N N N N N 6.247 -1.655 5.389 -4.174 0.545 0.327 C16 YOV 12 YOV C18 C13 C 0 1 N N N N N N 6.676 -0.861 4.340 -3.247 -0.470 0.045 C18 YOV 13 YOV C20 C14 C 0 1 Y N N N N N 6.284 0.232 -0.437 1.112 -1.898 -0.987 C20 YOV 14 YOV C21 C15 C 0 1 Y N N N N N 6.150 -0.103 -1.775 2.421 -1.752 -0.574 C21 YOV 15 YOV N02 N1 N 0 1 N N N N N N 3.707 -2.319 -3.644 6.345 0.481 0.187 N02 YOV 16 YOV N10 N2 N 0 1 N N N N N N 6.654 -0.327 1.919 -1.180 -1.140 -0.978 N10 YOV 17 YOV N13 N3 N 0 1 N N N N N N 4.977 -2.914 3.891 -2.787 2.093 -0.844 N13 YOV 18 YOV N14 N4 N 0 1 N N N N N N 5.414 -2.650 5.158 -3.942 1.798 -0.112 N14 YOV 19 YOV O17 O1 O 0 1 N N N N N N 6.621 -1.437 6.491 -5.185 0.294 0.965 O17 YOV 20 YOV CL19 CL1 CL 0 0 N N N N N N 7.792 0.473 4.703 -3.521 -2.092 0.599 CL19 YOV 21 YOV H1 H1 H 0 1 N N N N N N 3.173 -4.344 -3.667 8.185 1.230 -0.495 H1 YOV 22 YOV H2 H2 H 0 1 N N N N N N 3.910 -3.724 -5.184 7.143 0.529 -1.756 H2 YOV 23 YOV H3 H3 H 0 1 N N N N N N 4.937 -4.011 -3.738 6.752 2.121 -1.061 H3 YOV 24 YOV H4 H4 H 0 1 N N N N N N 1.625 -2.544 -3.683 6.049 2.232 1.308 H4 YOV 25 YOV H5 H5 H 0 1 N N N N N N 2.219 -0.851 -3.766 5.807 0.713 2.204 H5 YOV 26 YOV H6 H6 H 0 1 N N N N N N 2.362 -1.924 -5.200 7.453 1.252 1.796 H6 YOV 27 YOV H7 H7 H 0 1 N N N N N N 4.746 -1.552 -5.292 4.932 -0.122 -1.247 H7 YOV 28 YOV H8 H8 H 0 1 N N N N N N 4.496 -0.402 -3.935 4.476 1.311 -0.294 H8 YOV 29 YOV H9 H9 H 0 1 N N N N N N 6.252 -2.894 -3.735 4.674 -1.544 0.768 H9 YOV 30 YOV H10 H10 H 0 1 N N N N N N 6.876 -1.279 -4.216 4.218 -0.112 1.721 H10 YOV 31 YOV H11 H11 H 0 1 N N N N N N 6.569 -3.441 -1.513 2.084 0.990 1.365 H11 YOV 32 YOV H12 H12 H 0 1 N N N N N N 6.807 -2.841 0.869 -0.251 0.744 0.628 H12 YOV 33 YOV H13 H13 H 0 1 N N N N N N 4.990 -2.427 1.860 -1.026 1.419 -1.685 H13 YOV 34 YOV H14 H14 H 0 1 N N N N N N 4.289 -4.271 5.848 -4.558 3.798 -0.250 H14 YOV 35 YOV H15 H15 H 0 1 N N N N N N 5.828 -3.971 6.723 -5.875 2.601 -0.253 H15 YOV 36 YOV H16 H16 H 0 1 N N N N N N 4.422 -2.885 6.982 -5.011 2.970 1.259 H16 YOV 37 YOV H17 H17 H 0 1 N N N N N N 6.205 1.266 -0.134 0.841 -2.709 -1.647 H17 YOV 38 YOV H18 H18 H 0 1 N N N N N N 5.966 0.666 -2.511 3.175 -2.449 -0.910 H18 YOV 39 YOV H20 H20 H 0 1 N N N N N N 7.070 0.563 2.106 -1.449 -1.927 -1.478 H20 YOV 40 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal YOV C04 N02 SING N N 1 YOV C04 C05 SING N N 2 YOV C03 N02 SING N N 3 YOV C01 N02 SING N N 4 YOV C05 C06 SING N N 5 YOV C06 C21 DOUB Y N 6 YOV C06 C07 SING Y N 7 YOV C21 C20 SING Y N 8 YOV C07 C08 DOUB Y N 9 YOV C20 C09 DOUB Y N 10 YOV C08 C09 SING Y N 11 YOV C09 N10 SING N N 12 YOV N10 C11 SING N N 13 YOV C12 C11 SING N N 14 YOV C12 N13 DOUB N N 15 YOV C11 C18 DOUB N N 16 YOV N13 N14 SING N N 17 YOV C18 CL19 SING N N 18 YOV C18 C16 SING N N 19 YOV N14 C16 SING N N 20 YOV N14 C15 SING N N 21 YOV C16 O17 DOUB N N 22 YOV C01 H1 SING N N 23 YOV C01 H2 SING N N 24 YOV C01 H3 SING N N 25 YOV C03 H4 SING N N 26 YOV C03 H5 SING N N 27 YOV C03 H6 SING N N 28 YOV C04 H7 SING N N 29 YOV C04 H8 SING N N 30 YOV C05 H9 SING N N 31 YOV C05 H10 SING N N 32 YOV C07 H11 SING N N 33 YOV C08 H12 SING N N 34 YOV C12 H13 SING N N 35 YOV C15 H14 SING N N 36 YOV C15 H15 SING N N 37 YOV C15 H16 SING N N 38 YOV C20 H17 SING N N 39 YOV C21 H18 SING N N 40 YOV N10 H20 SING N N 41 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor YOV SMILES ACDLabs 12.01 CN1N=CC(Nc2ccc(CCN(C)C)cc2)=C(Cl)C1=O YOV InChI InChI 1.03 InChI=1S/C15H19ClN4O/c1-19(2)9-8-11-4-6-12(7-5-11)18-13-10-17-20(3)15(21)14(13)16/h4-7,10,18H,8-9H2,1-3H3 YOV InChIKey InChI 1.03 GMOXVZIZCRBKJB-UHFFFAOYSA-N YOV SMILES_CANONICAL CACTVS 3.385 CN(C)CCc1ccc(NC2=C(Cl)C(=O)N(C)N=C2)cc1 YOV SMILES CACTVS 3.385 CN(C)CCc1ccc(NC2=C(Cl)C(=O)N(C)N=C2)cc1 YOV SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 CN1C(=O)C(=C(C=N1)Nc2ccc(cc2)CCN(C)C)Cl YOV SMILES "OpenEye OEToolkits" 2.0.7 CN1C(=O)C(=C(C=N1)Nc2ccc(cc2)CCN(C)C)Cl # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier YOV "SYSTEMATIC NAME" ACDLabs 12.01 4-chloro-5-{4-[2-(dimethylamino)ethyl]anilino}-2-methylpyridazin-3(2H)-one YOV "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 4-chloranyl-5-[[4-[2-(dimethylamino)ethyl]phenyl]amino]-2-methyl-pyridazin-3-one # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site YOV 'Create component' 2021-03-18 RCSB YOV 'Initial release' 2022-02-16 RCSB # loop_ _software.name _software.version _software.description rdkit 2025.03.3 'Core functionality.' pdbeccdutils 1.0.0 'Wrapper to provide 2D templates and molecular fragments.' # loop_ _pdbe_chem_comp_atom_depiction.comp_id _pdbe_chem_comp_atom_depiction.atom_id _pdbe_chem_comp_atom_depiction.element _pdbe_chem_comp_atom_depiction.model_Cartn_x _pdbe_chem_comp_atom_depiction.model_Cartn_y _pdbe_chem_comp_atom_depiction.pdbx_ordinal YOV C01 C 13.392 4.125 1 YOV C03 C 12.093 6.375 2 YOV C04 C 10.794 4.125 3 YOV C05 C 10.794 2.625 4 YOV C06 C 9.495 1.875 5 YOV C07 C 9.495 0.375 6 YOV C08 C 8.196 -0.375 7 YOV C09 C 6.897 0.375 8 YOV C11 C 5.598 -1.875 9 YOV C12 C 6.897 -2.625 10 YOV C15 C 5.598 -6.375 11 YOV C16 C 4.299 -4.125 12 YOV C18 C 4.299 -2.625 13 YOV C20 C 6.897 1.875 14 YOV C21 C 8.196 2.625 15 YOV N02 N 12.093 4.875 16 YOV N10 N 5.598 -0.375 17 YOV N13 N 6.897 -4.125 18 YOV N14 N 5.598 -4.875 19 YOV O17 O 3.000 -4.875 20 YOV CL19 Cl 3.000 -1.875 21 # loop_ _pdbe_chem_comp_bond_depiction.comp_id _pdbe_chem_comp_bond_depiction.atom_id_1 _pdbe_chem_comp_bond_depiction.atom_id_2 _pdbe_chem_comp_bond_depiction.value_order _pdbe_chem_comp_bond_depiction.bond_dir _pdbe_chem_comp_bond_depiction.pdbx_ordinal YOV C04 N02 SINGLE NONE 1 YOV C04 C05 SINGLE NONE 2 YOV C03 N02 SINGLE NONE 3 YOV C01 N02 SINGLE NONE 4 YOV C05 C06 SINGLE NONE 5 YOV C06 C21 DOUBLE NONE 6 YOV C06 C07 SINGLE NONE 7 YOV C21 C20 SINGLE NONE 8 YOV C07 C08 DOUBLE NONE 9 YOV C20 C09 DOUBLE NONE 10 YOV C08 C09 SINGLE NONE 11 YOV C09 N10 SINGLE NONE 12 YOV N10 C11 SINGLE NONE 13 YOV C12 C11 SINGLE NONE 14 YOV C12 N13 DOUBLE NONE 15 YOV C11 C18 DOUBLE NONE 16 YOV N13 N14 SINGLE NONE 17 YOV C18 CL19 SINGLE NONE 18 YOV C18 C16 SINGLE NONE 19 YOV N14 C16 SINGLE NONE 20 YOV N14 C15 SINGLE NONE 21 YOV C16 O17 DOUBLE NONE 22 # loop_ _pdbe_chem_comp_substructure.comp_id _pdbe_chem_comp_substructure.substructure_name _pdbe_chem_comp_substructure.id _pdbe_chem_comp_substructure.substructure_type _pdbe_chem_comp_substructure.substructure_smiles _pdbe_chem_comp_substructure.substructure_inchis _pdbe_chem_comp_substructure.substructure_inchikeys YOV MurckoScaffold S1 scaffold 'O=c1cc(Nc2ccccc2)cn[nH]1' InChI=1S/C10H9N3O/c14-10-6-9(7-11-13-10)12-8-4-2-1-3-5-8/h1-7H,(H2,12,13,14) ZLQPUAUBNYXPLU-UHFFFAOYSA-N YOV phenyl F1 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N YOV pyridazine F2 fragment c1ccnnc1 InChI=1S/C4H4N2/c1-2-4-6-5-3-1/h1-4H PBMFSQRYOILNGV-UHFFFAOYSA-N YOV Z1270443752 F3 fragment 'CNc1cn[nH]c(=O)c1.Cl' 'InChI=1S/C5H7N3O.ClH/c1-6-4-2-5(9)8-7-3-4;/h2-3H,1H3,(H2,6,8,9);1H' CQYGJBICWUHTRC-UHFFFAOYSA-N # loop_ _pdbe_chem_comp_substructure_mapping.comp_id _pdbe_chem_comp_substructure_mapping.atom_id _pdbe_chem_comp_substructure_mapping.substructure_id _pdbe_chem_comp_substructure_mapping.substructure_ordinal YOV C06 S1 1 YOV C07 S1 1 YOV C08 S1 1 YOV C09 S1 1 YOV C11 S1 1 YOV C12 S1 1 YOV C16 S1 1 YOV C18 S1 1 YOV C20 S1 1 YOV C21 S1 1 YOV N10 S1 1 YOV N13 S1 1 YOV N14 S1 1 YOV O17 S1 1 YOV C06 F1 1 YOV C21 F1 1 YOV C20 F1 1 YOV C09 F1 1 YOV C08 F1 1 YOV C07 F1 1 YOV C11 F2 1 YOV C12 F2 1 YOV N13 F2 1 YOV N14 F2 1 YOV C16 F2 1 YOV C18 F2 1 YOV CL19 F3 1 YOV C09 F3 1 YOV N10 F3 1 YOV C11 F3 1 YOV C12 F3 1 YOV N13 F3 1 YOV N14 F3 1 YOV C16 F3 1 YOV O17 F3 1 YOV C18 F3 1 # _pdbe_chem_comp_rdkit_properties.comp_id YOV _pdbe_chem_comp_rdkit_properties.exactmw 306.125 _pdbe_chem_comp_rdkit_properties.amw 306.797 _pdbe_chem_comp_rdkit_properties.lipinskiHBA 5 _pdbe_chem_comp_rdkit_properties.lipinskiHBD 1 _pdbe_chem_comp_rdkit_properties.NumRotatableBonds 8 _pdbe_chem_comp_rdkit_properties.NumHBD 1 _pdbe_chem_comp_rdkit_properties.NumHBA 5 _pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 21 _pdbe_chem_comp_rdkit_properties.NumAtoms 40 _pdbe_chem_comp_rdkit_properties.NumHeteroatoms 6 _pdbe_chem_comp_rdkit_properties.NumAmideBonds 0 _pdbe_chem_comp_rdkit_properties.FractionCSP3 0.333 _pdbe_chem_comp_rdkit_properties.NumRings 2 _pdbe_chem_comp_rdkit_properties.NumAromaticRings 2 _pdbe_chem_comp_rdkit_properties.NumAliphaticRings 0 _pdbe_chem_comp_rdkit_properties.NumSaturatedRings 0 _pdbe_chem_comp_rdkit_properties.NumHeterocycles 1 _pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 1 _pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0 _pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 0 _pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0 _pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0 _pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 0 _pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0 _pdbe_chem_comp_rdkit_properties.labuteASA 155.458 _pdbe_chem_comp_rdkit_properties.tpsa 50.160 _pdbe_chem_comp_rdkit_properties.CrippenClogP 2.365 _pdbe_chem_comp_rdkit_properties.CrippenMR 84.665 _pdbe_chem_comp_rdkit_properties.chi0v 10.831 _pdbe_chem_comp_rdkit_properties.chi1v 5.510 _pdbe_chem_comp_rdkit_properties.chi2v 2.313 _pdbe_chem_comp_rdkit_properties.chi3v 2.313 _pdbe_chem_comp_rdkit_properties.chi4v 1.273 _pdbe_chem_comp_rdkit_properties.chi0n 29.075 _pdbe_chem_comp_rdkit_properties.chi1n 14.579 _pdbe_chem_comp_rdkit_properties.chi2n 1.972 _pdbe_chem_comp_rdkit_properties.chi3n 1.972 _pdbe_chem_comp_rdkit_properties.chi4n 1.108 _pdbe_chem_comp_rdkit_properties.hallKierAlpha -1.850 _pdbe_chem_comp_rdkit_properties.kappa1 4.116 _pdbe_chem_comp_rdkit_properties.kappa2 6.737 _pdbe_chem_comp_rdkit_properties.kappa3 4.059 _pdbe_chem_comp_rdkit_properties.Phi 1.320 # _pdbe_chem_comp_external_mappings.comp_id YOV _pdbe_chem_comp_external_mappings.source UniChem _pdbe_chem_comp_external_mappings.resource PubChem _pdbe_chem_comp_external_mappings.resource_id 162624743 # loop_ _pdbe_chem_comp_rdkit_conformer.comp_id _pdbe_chem_comp_rdkit_conformer.atom_id _pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit _pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit _pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit _pdbe_chem_comp_rdkit_conformer.rdkit_method _pdbe_chem_comp_rdkit_conformer.rdkit_ordinal YOV C01 -5.896 0.784 -0.296 ETKDGv3 1 YOV C03 -5.060 -0.144 -2.379 ETKDGv3 2 YOV C04 -3.473 0.761 -0.730 ETKDGv3 3 YOV C05 -3.165 -0.570 -0.013 ETKDGv3 4 YOV C06 -1.762 -0.555 0.531 ETKDGv3 5 YOV C07 -0.635 -1.008 -0.319 ETKDGv3 6 YOV C08 0.621 -0.958 0.140 ETKDGv3 7 YOV C09 0.904 -0.432 1.501 ETKDGv3 8 YOV C11 3.412 -0.282 1.186 ETKDGv3 9 YOV C12 3.395 0.625 0.009 ETKDGv3 10 YOV C15 6.786 0.278 -1.379 ETKDGv3 11 YOV C16 5.726 -0.793 0.642 ETKDGv3 12 YOV C18 4.540 -0.947 1.499 ETKDGv3 13 YOV C20 -0.121 -0.036 2.274 ETKDGv3 14 YOV C21 -1.507 -0.082 1.764 ETKDGv3 15 YOV N02 -4.832 0.842 -1.311 ETKDGv3 16 YOV N10 2.245 -0.393 2.018 ETKDGv3 17 YOV N13 4.441 0.766 -0.750 ETKDGv3 18 YOV N14 5.640 0.071 -0.500 ETKDGv3 19 YOV O17 6.794 -1.409 0.907 ETKDGv3 20 YOV CL19 4.616 -2.034 2.885 ETKDGv3 21 YOV H1 -5.678 1.485 0.539 ETKDGv3 22 YOV H2 -6.860 1.098 -0.749 ETKDGv3 23 YOV H3 -6.018 -0.243 0.111 ETKDGv3 24 YOV H4 -5.184 -1.170 -1.969 ETKDGv3 25 YOV H5 -4.217 -0.137 -3.103 ETKDGv3 26 YOV H6 -5.982 0.122 -2.939 ETKDGv3 27 YOV H7 -2.725 0.922 -1.537 ETKDGv3 28 YOV H8 -3.336 1.601 -0.013 ETKDGv3 29 YOV H9 -3.881 -0.740 0.818 ETKDGv3 30 YOV H10 -3.263 -1.420 -0.719 ETKDGv3 31 YOV H11 -0.827 -1.390 -1.314 ETKDGv3 32 YOV H12 1.427 -1.318 -0.486 ETKDGv3 33 YOV H13 2.503 1.193 -0.219 ETKDGv3 34 YOV H14 7.603 0.778 -0.817 ETKDGv3 35 YOV H15 6.502 0.916 -2.242 ETKDGv3 36 YOV H16 7.146 -0.699 -1.765 ETKDGv3 37 YOV H17 0.058 0.337 3.274 ETKDGv3 38 YOV H18 -2.312 0.273 2.396 ETKDGv3 39 YOV H20 2.375 -0.414 3.055 ETKDGv3 40 #