Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : Y6H    

Bonds between two atoms of the molecule

Total Number of Bonds: 66


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C20 C19 C C sing 1.53 N N
2 C26 C25 C C sing 1.53 N N
3 C21 C19 C C sing 1.53 N N
4 O29 C28 O C sing 1.43 N N
5 O29 C18 O C sing 1.43 N N
6 C19 C18 C C sing 1.53 N N
7 C19 C22 C C sing 1.53 N N
8 C28 C25 C C sing 1.53 N N
9 C25 C24 C C sing 1.53 N N
10 C25 C27 C C sing 1.53 N N
11 C18 O23 C O sing 1.43 N N
12 C18 C17 C C sing 1.51 N N
13 C24 O23 C O sing 1.43 N N
14 C30 C17 C C doub 1.38 N Y
15 C30 C31 C C sing 1.38 N Y
16 C17 C16 C C sing 1.38 N Y
17 C31 C14 C C doub 1.38 N Y
18 C16 C15 C C doub 1.38 N Y
19 C14 C15 C C sing 1.38 N Y
20 C14 C13 C C sing 1.51 N N
21 C13 N12 C N sing 1.47 N N
22 N12 C11 N C sing 1.39 N N
23 C10 C11 C C doub 1.39 N Y
24 C10 C09 C C sing 1.38 N Y
25 C11 C03 C C sing 1.4 N Y
26 C09 C05 C C doub 1.4 N Y
27 C03 O02 C O sing 1.36 N N
28 C03 C04 C C doub 1.38 N Y
29 C05 C04 C C sing 1.4 N Y
30 C05 C06 C C sing 1.47 N N
31 O02 C01 O C sing 1.43 N N
32 O07 C06 O C doub 1.22 N N
33 C06 O08 C O sing 1.35 N N
34 C10 H101 C H sing 1.08 N N
35 C13 H132 C H sing 1.09 N N
36 C13 H131 C H sing 1.09 N N
37 C15 H151 C H sing 1.08 N N
38 C16 H161 C H sing 1.08 N N
39 C21 H211 C H sing 1.09 N N
40 C21 H213 C H sing 1.09 N N
41 C21 H212 C H sing 1.09 N N
42 C22 H222 C H sing 1.09 N N
43 C22 H221 C H sing 1.09 N N
44 C22 H223 C H sing 1.09 N N
45 C24 H241 C H sing 1.09 N N
46 C24 H242 C H sing 1.09 N N
47 C26 H263 C H sing 1.09 N N
48 C26 H261 C H sing 1.09 N N
49 C26 H262 C H sing 1.09 N N
50 C01 H012 C H sing 1.09 N N
51 C01 H013 C H sing 1.09 N N
52 C01 H011 C H sing 1.09 N N
53 C04 H041 C H sing 1.08 N N
54 C09 H091 C H sing 1.08 N N
55 C20 H203 C H sing 1.09 N N
56 C20 H202 C H sing 1.09 N N
57 C20 H201 C H sing 1.09 N N
58 C27 H272 C H sing 1.09 N N
59 C27 H271 C H sing 1.09 N N
60 C27 H273 C H sing 1.09 N N
61 C28 H282 C H sing 1.09 N N
62 C28 H281 C H sing 1.09 N N
63 C30 H301 C H sing 1.08 N N
64 C31 H311 C H sing 1.08 N N
65 N12 H121 N H sing 0.97 N N
66 O08 H1 O H sing 0.97 N N