data_Y6H
#
_chem_comp.id Y6H
_chem_comp.name "4-({[4-(2-tert-butyl-5,5-dimethyl-1,3-dioxan-2-yl)phenyl]methyl}amino)-3-methoxybenzoic acid"
_chem_comp.type non-polymer
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C25 H33 N O5"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2023-01-06
_chem_comp.pdbx_modified_date 2023-10-27
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 427.533
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code Y6H
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 8FLM
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
Y6H C10 C1 C 0 1 Y N N N N N 113.285 114.330 108.838 4.159 1.465 0.001 C10 Y6H 1
Y6H C11 C2 C 0 1 Y N N N N N 114.150 115.262 109.395 3.623 0.182 -0.000 C11 Y6H 2
Y6H C13 C3 C 0 1 N N N N N N 115.852 114.934 107.501 1.354 1.172 0.000 C13 Y6H 3
Y6H C14 C4 C 0 1 Y N N N N N 115.167 115.502 106.227 -0.080 0.711 0.000 C14 Y6H 4
Y6H C15 C5 C 0 1 Y N N N N N 114.155 116.449 106.357 -0.738 0.499 1.197 C15 Y6H 5
Y6H C16 C6 C 0 1 Y N N N N N 113.530 116.960 105.227 -2.054 0.076 1.197 C16 Y6H 6
Y6H C17 C7 C 0 1 Y N N N N N 113.922 116.534 103.963 -2.712 -0.136 0.000 C17 Y6H 7
Y6H C18 C8 C 0 1 N N N N N N 113.230 117.082 102.758 -4.147 -0.598 -0.000 C18 Y6H 8
Y6H C21 C9 C 0 1 N N N N N N 115.516 118.360 101.317 -3.484 -2.657 -1.250 C21 Y6H 9
Y6H C22 C10 C 0 1 N N N N N N 114.369 119.184 103.136 -3.484 -2.658 1.248 C22 Y6H 10
Y6H C24 C11 C 0 1 N N N N N N 110.758 117.167 102.802 -4.844 1.327 -1.246 C24 Y6H 11
Y6H C25 C12 C 0 1 N N N N N N 110.717 115.740 102.501 -5.547 1.875 0.001 C25 Y6H 12
Y6H C26 C13 C 0 1 N N N N N N 109.949 115.560 101.167 -7.012 1.436 -0.001 C26 Y6H 13
Y6H O29 O1 O 0 1 N N N N N N 112.998 115.970 101.868 -4.807 -0.102 1.167 O29 Y6H 14
Y6H C01 C14 C 0 1 N N N N N N 114.866 116.726 112.588 4.864 -3.275 0.000 C01 Y6H 15
Y6H C03 C15 C 0 1 Y N N N N N 113.857 115.832 110.627 4.468 -0.930 -0.000 C03 Y6H 16
Y6H C04 C16 C 0 1 Y N N N N N 112.698 115.471 111.301 5.837 -0.756 0.000 C04 Y6H 17
Y6H C05 C17 C 0 1 Y N N N N N 111.836 114.538 110.747 6.375 0.535 0.000 C05 Y6H 18
Y6H C06 C18 C 0 1 N N N N N N 110.562 114.137 111.499 7.836 0.726 -0.000 C06 Y6H 19
Y6H C09 C19 C 0 1 Y N N N N N 112.128 113.966 109.516 5.524 1.644 0.001 C09 Y6H 20
Y6H C19 C20 C 0 1 N N N N N N 114.117 118.167 101.983 -4.190 -2.127 -0.001 C19 Y6H 21
Y6H C20 C21 C 0 1 N N N N N N 113.338 118.104 100.639 -5.647 -2.596 -0.001 C20 Y6H 22
Y6H C27 C22 C 0 1 N N N N N N 109.936 115.022 103.632 -5.470 3.404 0.001 C27 Y6H 23
Y6H C28 C23 C 0 1 N N N N N N 112.016 115.084 102.356 -4.844 1.326 1.247 C28 Y6H 24
Y6H C30 C24 C 0 1 Y N N N N N 114.925 115.577 103.829 -2.055 0.077 -1.197 C30 Y6H 25
Y6H C31 C25 C 0 1 Y N N N N N 115.552 115.063 104.963 -0.740 0.505 -1.197 C31 Y6H 26
Y6H N12 N1 N 0 1 N N N N N N 115.377 115.663 108.691 2.242 0.006 -0.000 N12 Y6H 27
Y6H O02 O2 O 0 1 N N N N N N 114.736 116.785 111.183 3.941 -2.184 0.000 O02 Y6H 28
Y6H O07 O3 O 0 1 N N N N N N 110.079 112.981 111.350 8.575 -0.239 -0.001 O07 Y6H 29
Y6H O08 O4 O 0 1 N N N N N N 110.003 114.962 112.272 8.354 1.970 -0.000 O08 Y6H 30
Y6H O23 O5 O 0 1 N N N N N N 111.988 117.719 103.222 -4.807 -0.102 -1.167 O23 Y6H 31
Y6H H101 H1 H 0 0 N N N N N N 113.511 113.888 107.879 3.503 2.323 -0.004 H101 Y6H 32
Y6H H132 H2 H 0 0 N N N N N N 115.605 113.867 107.604 1.543 1.772 -0.889 H132 Y6H 33
Y6H H131 H3 H 0 0 N N N N N N 116.942 115.051 107.412 1.543 1.772 0.891 H131 Y6H 34
Y6H H151 H4 H 0 0 N N N N N N 113.855 116.787 107.338 -0.224 0.664 2.133 H151 Y6H 35
Y6H H161 H5 H 0 0 N N N N N N 112.739 117.688 105.330 -2.568 -0.090 2.132 H161 Y6H 36
Y6H H211 H6 H 0 0 N N N N N N 116.287 118.437 102.098 -2.446 -2.323 -1.250 H211 Y6H 37
Y6H H213 H7 H 0 0 N N N N N N 115.735 117.499 100.669 -3.515 -3.746 -1.250 H213 Y6H 38
Y6H H212 H8 H 0 0 N N N N N N 115.511 119.281 100.715 -3.987 -2.279 -2.140 H212 Y6H 39
Y6H H222 H9 H 0 0 N N N N N N 115.022 118.726 103.894 -2.446 -2.324 1.248 H222 Y6H 40
Y6H H221 H10 H 0 0 N N N N N N 114.854 120.085 102.731 -3.987 -2.280 2.138 H221 Y6H 41
Y6H H223 H11 H 0 0 N N N N N N 113.409 119.460 103.597 -3.514 -3.747 1.248 H223 Y6H 42
Y6H H241 H12 H 0 0 N N N N N N 110.453 117.703 101.891 -5.394 1.629 -2.137 H241 Y6H 43
Y6H H242 H13 H 0 0 N N N N N N 110.025 117.354 103.601 -3.827 1.716 -1.295 H242 Y6H 44
Y6H H263 H14 H 0 0 N N N N N N 108.964 116.044 101.242 -7.064 0.347 0.003 H263 Y6H 45
Y6H H261 H15 H 0 0 N N N N N N 110.522 116.021 100.349 -7.510 1.827 0.886 H261 Y6H 46
Y6H H262 H16 H 0 0 N N N N N N 109.816 114.487 100.962 -7.505 1.820 -0.894 H262 Y6H 47
Y6H H012 H17 H 0 0 N N N N N N 115.568 117.503 112.925 5.491 -3.221 -0.890 H012 Y6H 48
Y6H H013 H18 H 0 0 N N N N N N 113.884 116.892 113.054 5.491 -3.220 0.890 H013 Y6H 49
Y6H H011 H19 H 0 0 N N N N N N 115.247 115.736 112.880 4.314 -4.216 0.001 H011 Y6H 50
Y6H H041 H20 H 0 0 N N N N N N 112.468 115.917 112.257 6.491 -1.615 0.000 H041 Y6H 51
Y6H H091 H21 H 0 0 N N N N N N 111.456 113.238 109.086 5.938 2.642 0.001 H091 Y6H 52
Y6H H203 H22 H 0 0 N N N N N N 112.266 117.964 100.842 -5.677 -3.685 -0.001 H203 Y6H 53
Y6H H202 H23 H 0 0 N N N N N N 113.487 119.043 100.085 -6.150 -2.218 0.889 H202 Y6H 54
Y6H H201 H24 H 0 0 N N N N N N 113.710 117.261 100.039 -6.150 -2.218 -0.891 H201 Y6H 55
Y6H H272 H25 H 0 0 N N N N N N 110.473 115.144 104.584 -5.960 3.792 -0.891 H272 Y6H 56
Y6H H271 H26 H 0 0 N N N N N N 108.931 115.461 103.719 -5.970 3.792 0.889 H271 Y6H 57
Y6H H273 H27 H 0 0 N N N N N N 109.849 113.951 103.395 -4.425 3.715 0.007 H273 Y6H 58
Y6H H282 H28 H 0 0 N N N N N N 111.914 114.243 101.654 -3.827 1.715 1.294 H282 Y6H 59
Y6H H281 H29 H 0 0 N N N N N N 112.335 114.705 103.338 -5.394 1.627 2.139 H281 Y6H 60
Y6H H301 H30 H 0 0 N N N N N N 115.217 115.233 102.848 -2.569 -0.088 -2.132 H301 Y6H 61
Y6H H311 H31 H 0 0 N N N N N N 116.335 114.326 104.861 -0.226 0.672 -2.132 H311 Y6H 62
Y6H H121 H32 H 0 0 N N N N N N 116.116 115.619 109.363 1.867 -0.889 -0.000 H121 Y6H 63
Y6H H1 H33 H 0 1 N N N N N N 109.236 114.561 112.663 9.318 2.045 -0.001 H1 Y6H 64
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
Y6H C20 C19 SING N N 1
Y6H C26 C25 SING N N 2
Y6H C21 C19 SING N N 3
Y6H O29 C28 SING N N 4
Y6H O29 C18 SING N N 5
Y6H C19 C18 SING N N 6
Y6H C19 C22 SING N N 7
Y6H C28 C25 SING N N 8
Y6H C25 C24 SING N N 9
Y6H C25 C27 SING N N 10
Y6H C18 O23 SING N N 11
Y6H C18 C17 SING N N 12
Y6H C24 O23 SING N N 13
Y6H C30 C17 DOUB Y N 14
Y6H C30 C31 SING Y N 15
Y6H C17 C16 SING Y N 16
Y6H C31 C14 DOUB Y N 17
Y6H C16 C15 DOUB Y N 18
Y6H C14 C15 SING Y N 19
Y6H C14 C13 SING N N 20
Y6H C13 N12 SING N N 21
Y6H N12 C11 SING N N 22
Y6H C10 C11 DOUB Y N 23
Y6H C10 C09 SING Y N 24
Y6H C11 C03 SING Y N 25
Y6H C09 C05 DOUB Y N 26
Y6H C03 O02 SING N N 27
Y6H C03 C04 DOUB Y N 28
Y6H C05 C04 SING Y N 29
Y6H C05 C06 SING N N 30
Y6H O02 C01 SING N N 31
Y6H O07 C06 DOUB N N 32
Y6H C06 O08 SING N N 33
Y6H C10 H101 SING N N 34
Y6H C13 H132 SING N N 35
Y6H C13 H131 SING N N 36
Y6H C15 H151 SING N N 37
Y6H C16 H161 SING N N 38
Y6H C21 H211 SING N N 39
Y6H C21 H213 SING N N 40
Y6H C21 H212 SING N N 41
Y6H C22 H222 SING N N 42
Y6H C22 H221 SING N N 43
Y6H C22 H223 SING N N 44
Y6H C24 H241 SING N N 45
Y6H C24 H242 SING N N 46
Y6H C26 H263 SING N N 47
Y6H C26 H261 SING N N 48
Y6H C26 H262 SING N N 49
Y6H C01 H012 SING N N 50
Y6H C01 H013 SING N N 51
Y6H C01 H011 SING N N 52
Y6H C04 H041 SING N N 53
Y6H C09 H091 SING N N 54
Y6H C20 H203 SING N N 55
Y6H C20 H202 SING N N 56
Y6H C20 H201 SING N N 57
Y6H C27 H272 SING N N 58
Y6H C27 H271 SING N N 59
Y6H C27 H273 SING N N 60
Y6H C28 H282 SING N N 61
Y6H C28 H281 SING N N 62
Y6H C30 H301 SING N N 63
Y6H C31 H311 SING N N 64
Y6H N12 H121 SING N N 65
Y6H O08 H1 SING N N 66
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
Y6H SMILES ACDLabs 12.01 CC1(C)COC(OC1)(c1ccc(CNc2ccc(cc2OC)C(=O)O)cc1)C(C)(C)C
Y6H InChI InChI 1.06 InChI=1S/C25H33NO5/c1-23(2,3)25(30-15-24(4,5)16-31-25)19-10-7-17(8-11-19)14-26-20-12-9-18(22(27)28)13-21(20)29-6/h7-13,26H,14-16H2,1-6H3,(H,27,28)
Y6H InChIKey InChI 1.06 CZSPKEVHLRWAFC-UHFFFAOYSA-N
Y6H SMILES_CANONICAL CACTVS 3.385 COc1cc(ccc1NCc2ccc(cc2)C3(OCC(C)(C)CO3)C(C)(C)C)C(O)=O
Y6H SMILES CACTVS 3.385 COc1cc(ccc1NCc2ccc(cc2)C3(OCC(C)(C)CO3)C(C)(C)C)C(O)=O
Y6H SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 CC1(COC(OC1)(c2ccc(cc2)CNc3ccc(cc3OC)C(=O)O)C(C)(C)C)C
Y6H SMILES "OpenEye OEToolkits" 2.0.7 CC1(COC(OC1)(c2ccc(cc2)CNc3ccc(cc3OC)C(=O)O)C(C)(C)C)C
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
Y6H "SYSTEMATIC NAME" ACDLabs 12.01 "4-({[4-(2-tert-butyl-5,5-dimethyl-1,3-dioxan-2-yl)phenyl]methyl}amino)-3-methoxybenzoic acid"
Y6H "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "4-[[4-(2-~{tert}-butyl-5,5-dimethyl-1,3-dioxan-2-yl)phenyl]methylamino]-3-methoxy-benzoic acid"
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
Y6H 'Create component' 2023-01-06 RCSB
Y6H 'Initial release' 2023-11-01 RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2025.03.3 'Core functionality.'
pdbeccdutils 1.0.0 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
Y6H C10 C 8.196 -3.042 1
Y6H C11 C 8.196 -1.542 2
Y6H C13 C 10.794 -1.542 3
Y6H C14 C 12.093 -0.792 4
Y6H C15 C 12.093 0.708 5
Y6H C16 C 13.392 1.458 6
Y6H C17 C 14.691 0.708 7
Y6H C18 C 15.990 1.458 8
Y6H C21 C 18.040 0.909 9
Y6H C22 C 15.990 -1.140 10
Y6H C24 C 14.691 3.708 11
Y6H C25 C 15.990 4.458 12
Y6H C26 C 16.740 5.757 13
Y6H O29 O 17.290 2.208 14
Y6H C01 C 5.598 1.458 15
Y6H C03 C 6.897 -0.792 16
Y6H C04 C 5.598 -1.542 17
Y6H C05 C 5.598 -3.042 18
Y6H C06 C 4.299 -3.792 19
Y6H C09 C 6.897 -3.792 20
Y6H C19 C 16.740 0.159 21
Y6H C20 C 17.490 -1.140 22
Y6H C27 C 15.240 5.757 23
Y6H C28 C 17.290 3.708 24
Y6H C30 C 14.691 -0.792 25
Y6H C31 C 13.393 -1.542 26
Y6H N12 N 9.495 -0.792 27
Y6H O02 O 6.897 0.708 28
Y6H O07 O 4.299 -5.292 29
Y6H O08 O 3.000 -3.042 30
Y6H O23 O 14.691 2.208 31
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
Y6H C20 C19 SINGLE NONE 1
Y6H C26 C25 SINGLE NONE 2
Y6H C21 C19 SINGLE NONE 3
Y6H O29 C28 SINGLE NONE 4
Y6H O29 C18 SINGLE NONE 5
Y6H C19 C18 SINGLE NONE 6
Y6H C19 C22 SINGLE NONE 7
Y6H C28 C25 SINGLE NONE 8
Y6H C25 C24 SINGLE NONE 9
Y6H C25 C27 SINGLE NONE 10
Y6H C18 O23 SINGLE NONE 11
Y6H C18 C17 SINGLE NONE 12
Y6H C24 O23 SINGLE NONE 13
Y6H C30 C17 DOUBLE NONE 14
Y6H C30 C31 SINGLE NONE 15
Y6H C17 C16 SINGLE NONE 16
Y6H C31 C14 DOUBLE NONE 17
Y6H C16 C15 DOUBLE NONE 18
Y6H C14 C15 SINGLE NONE 19
Y6H C14 C13 SINGLE NONE 20
Y6H C13 N12 SINGLE NONE 21
Y6H N12 C11 SINGLE NONE 22
Y6H C10 C11 DOUBLE NONE 23
Y6H C10 C09 SINGLE NONE 24
Y6H C11 C03 SINGLE NONE 25
Y6H C09 C05 DOUBLE NONE 26
Y6H C03 O02 SINGLE NONE 27
Y6H C03 C04 DOUBLE NONE 28
Y6H C05 C04 SINGLE NONE 29
Y6H C05 C06 SINGLE NONE 30
Y6H O02 C01 SINGLE NONE 31
Y6H O07 C06 DOUBLE NONE 32
Y6H C06 O08 SINGLE NONE 33
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
Y6H MurckoScaffold S1 scaffold c1ccc(NCc2ccc(C3OCCCO3)cc2)cc1 InChI=1S/C17H19NO2/c1-2-5-16(6-3-1)18-13-14-7-9-15(10-8-14)17-19-11-4-12-20-17/h1-3,5-10,17-18H,4,11-13H2 BJPPMDQLSMLODS-UHFFFAOYSA-N
Y6H phenyl F1 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
Y6H C10 S1 1
Y6H C11 S1 1
Y6H C13 S1 1
Y6H C14 S1 1
Y6H C15 S1 1
Y6H C16 S1 1
Y6H C17 S1 1
Y6H C18 S1 1
Y6H C24 S1 1
Y6H C25 S1 1
Y6H O29 S1 1
Y6H C03 S1 1
Y6H C04 S1 1
Y6H C05 S1 1
Y6H C09 S1 1
Y6H C28 S1 1
Y6H C30 S1 1
Y6H C31 S1 1
Y6H N12 S1 1
Y6H O23 S1 1
Y6H C10 F1 1
Y6H C11 F1 1
Y6H C03 F1 1
Y6H C04 F1 1
Y6H C05 F1 1
Y6H C09 F1 1
Y6H C14 F1 2
Y6H C31 F1 2
Y6H C30 F1 2
Y6H C17 F1 2
Y6H C16 F1 2
Y6H C15 F1 2
#
_pdbe_chem_comp_rdkit_properties.comp_id Y6H
_pdbe_chem_comp_rdkit_properties.exactmw 427.236
_pdbe_chem_comp_rdkit_properties.amw 427.541
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 6
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 2
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 9
_pdbe_chem_comp_rdkit_properties.NumHBD 2
_pdbe_chem_comp_rdkit_properties.NumHBA 6
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 31
_pdbe_chem_comp_rdkit_properties.NumAtoms 64
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 6
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 0
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.480
_pdbe_chem_comp_rdkit_properties.NumRings 3
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 2
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 1
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 230.582
_pdbe_chem_comp_rdkit_properties.tpsa 77.020
_pdbe_chem_comp_rdkit_properties.CrippenClogP 4.270
_pdbe_chem_comp_rdkit_properties.CrippenMR 118.308
_pdbe_chem_comp_rdkit_properties.chi0v 14.988
_pdbe_chem_comp_rdkit_properties.chi1v 7.830
_pdbe_chem_comp_rdkit_properties.chi2v 3.489
_pdbe_chem_comp_rdkit_properties.chi3v 3.489
_pdbe_chem_comp_rdkit_properties.chi4v 2.063
_pdbe_chem_comp_rdkit_properties.chi0n 47.988
_pdbe_chem_comp_rdkit_properties.chi1n 24.186
_pdbe_chem_comp_rdkit_properties.chi2n 3.489
_pdbe_chem_comp_rdkit_properties.chi3n 3.489
_pdbe_chem_comp_rdkit_properties.chi4n 2.063
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -2.570
_pdbe_chem_comp_rdkit_properties.kappa1 5.317
_pdbe_chem_comp_rdkit_properties.kappa2 8.518
_pdbe_chem_comp_rdkit_properties.kappa3 4.858
_pdbe_chem_comp_rdkit_properties.Phi 1.461
#
_pdbe_chem_comp_external_mappings.comp_id Y6H
_pdbe_chem_comp_external_mappings.source UniChem
_pdbe_chem_comp_external_mappings.resource PubChem
_pdbe_chem_comp_external_mappings.resource_id 168719774
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
Y6H C10 5.334 -0.296 -1.198 ETKDGv3 1
Y6H C11 4.633 -0.340 -0.052 ETKDGv3 2
Y6H C13 2.273 -0.251 0.960 ETKDGv3 3
Y6H C14 0.857 -0.223 0.449 ETKDGv3 4
Y6H C15 0.302 1.028 -0.114 ETKDGv3 5
Y6H C16 -0.939 1.055 -0.612 ETKDGv3 6
Y6H C17 -1.784 -0.173 -0.616 ETKDGv3 7
Y6H C18 -3.210 -0.134 -1.198 ETKDGv3 8
Y6H C21 -2.265 0.357 -3.557 ETKDGv3 9
Y6H C22 -4.609 -0.475 -3.327 ETKDGv3 10
Y6H C24 -4.304 -0.622 0.843 ETKDGv3 11
Y6H C25 -4.972 0.777 0.883 ETKDGv3 12
Y6H C26 -6.427 0.673 1.382 ETKDGv3 13
Y6H O29 -3.680 1.219 -1.124 ETKDGv3 14
Y6H C01 5.208 -0.147 3.758 ETKDGv3 15
Y6H C03 5.360 -0.180 1.249 ETKDGv3 16
Y6H C04 6.692 0.041 1.237 ETKDGv3 17
Y6H C05 7.448 0.106 -0.038 ETKDGv3 18
Y6H C06 8.908 0.348 -0.029 ETKDGv3 19
Y6H C09 6.789 -0.062 -1.195 ETKDGv3 20
Y6H C19 -3.188 -0.565 -2.723 ETKDGv3 21
Y6H C20 -2.700 -2.025 -2.899 ETKDGv3 22
Y6H C27 -4.184 1.717 1.821 ETKDGv3 23
Y6H C28 -4.963 1.343 -0.545 ETKDGv3 24
Y6H C30 -1.258 -1.313 -0.120 ETKDGv3 25
Y6H C31 0.113 -1.340 0.426 ETKDGv3 26
Y6H N12 3.207 -0.551 -0.126 ETKDGv3 27
Y6H O02 4.647 -0.279 2.455 ETKDGv3 28
Y6H O07 9.518 0.504 1.062 ETKDGv3 29
Y6H O08 9.622 0.406 -1.224 ETKDGv3 30
Y6H O23 -4.055 -1.049 -0.486 ETKDGv3 31
Y6H H101 4.834 -0.415 -2.152 ETKDGv3 32
Y6H H132 2.515 0.743 1.396 ETKDGv3 33
Y6H H131 2.370 -1.018 1.758 ETKDGv3 34
Y6H H151 0.904 1.929 -0.128 ETKDGv3 35
Y6H H161 -1.315 1.982 -1.026 ETKDGv3 36
Y6H H211 -2.327 0.101 -4.637 ETKDGv3 37
Y6H H213 -1.203 0.246 -3.254 ETKDGv3 38
Y6H H212 -2.557 1.422 -3.442 ETKDGv3 39
Y6H H222 -4.620 -0.848 -4.374 ETKDGv3 40
Y6H H221 -5.330 -1.086 -2.743 ETKDGv3 41
Y6H H223 -4.965 0.576 -3.355 ETKDGv3 42
Y6H H241 -3.369 -0.652 1.444 ETKDGv3 43
Y6H H242 -4.960 -1.382 1.319 ETKDGv3 44
Y6H H263 -7.015 -0.015 0.737 ETKDGv3 45
Y6H H261 -6.456 0.284 2.423 ETKDGv3 46
Y6H H262 -6.918 1.671 1.368 ETKDGv3 47
Y6H H012 5.973 -0.933 3.927 ETKDGv3 48
Y6H H013 4.403 -0.268 4.512 ETKDGv3 49
Y6H H011 5.658 0.861 3.880 ETKDGv3 50
Y6H H041 7.237 0.160 2.163 ETKDGv3 51
Y6H H091 7.306 -0.025 -2.145 ETKDGv3 52
Y6H H203 -2.795 -2.347 -3.958 ETKDGv3 53
Y6H H202 -1.629 -2.130 -2.631 ETKDGv3 54
Y6H H201 -3.297 -2.723 -2.276 ETKDGv3 55
Y6H H272 -4.652 2.724 1.853 ETKDGv3 56
Y6H H271 -4.166 1.308 2.854 ETKDGv3 57
Y6H H273 -3.135 1.832 1.473 ETKDGv3 58
Y6H H282 -5.244 2.418 -0.533 ETKDGv3 59
Y6H H281 -5.723 0.829 -1.173 ETKDGv3 60
Y6H H301 -1.831 -2.231 -0.110 ETKDGv3 61
Y6H H311 0.509 -2.275 0.803 ETKDGv3 62
Y6H H121 2.806 -0.855 -1.045 ETKDGv3 63
Y6H H1 10.621 0.571 -1.225 ETKDGv3 64
#