Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : Y1E    

Bonds between two atoms of the molecule

Total Number of Bonds: 65


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C29 C28 C C doub 1.38 N Y
2 C29 C30 C C sing 1.38 N Y
3 C28 C27 C C sing 1.38 N Y
4 C30 C31 C C doub 1.38 N Y
5 C27 C26 C C doub 1.39 N Y
6 C31 C26 C C sing 1.39 N Y
7 C26 C25 C C sing 1.48 N N
8 C25 C24 C C doub 1.39 N Y
9 C25 C32 C C sing 1.39 N Y
10 C24 C23 C C sing 1.38 N Y
11 C32 C33 C C doub 1.38 N Y
12 C23 C22 C C doub 1.39 N Y
13 C33 C22 C C sing 1.39 N Y
14 C22 N03 C N sing 1.4 N N
15 C08 C07 C C sing 1.53 N N
16 O15 C05 O C doub 1.21 N N
17 N03 C04 N C sing 1.47 N N
18 N03 C02 N C sing 1.35 N N
19 C35 C34 C C doub 1.33 N N
20 C04 C05 C C sing 1.51 N N
21 C04 C16 C C sing 1.51 N N
22 C05 N06 C N sing 1.35 N N
23 N06 C07 N C sing 1.46 N N
24 C07 C09 C C sing 1.51 N N
25 C34 C02 C C sing 1.47 N N
26 C02 O01 C O doub 1.22 N N
27 C17 C16 C C doub 1.38 N Y
28 C17 N18 C N sing 1.32 N Y
29 C16 C21 C C sing 1.39 N Y
30 N18 C19 N C doub 1.32 N Y
31 C09 C10 C C doub 1.38 N Y
32 C09 C14 C C sing 1.38 N Y
33 C21 C20 C C doub 1.39 N Y
34 C10 C11 C C sing 1.38 N Y
35 C14 C13 C C doub 1.38 N Y
36 C19 C20 C C sing 1.38 N Y
37 C11 C12 C C doub 1.38 N Y
38 C13 C12 C C sing 1.38 N Y
39 C10 H1 C H sing 1.08 N N
40 C13 H2 C H sing 1.08 N N
41 C17 H3 C H sing 1.08 N N
42 C20 H4 C H sing 1.08 N N
43 C21 H5 C H sing 1.08 N N
44 C24 H6 C H sing 1.08 N N
45 C28 H7 C H sing 1.08 N N
46 C04 H8 C H sing 1.09 N N
47 N06 H9 N H sing 0.97 N N
48 C07 H10 C H sing 1.09 N N
49 C08 H11 C H sing 1.09 N N
50 C08 H12 C H sing 1.09 N N
51 C08 H13 C H sing 1.09 N N
52 C11 H14 C H sing 1.08 N N
53 C12 H15 C H sing 1.08 N N
54 C14 H16 C H sing 1.08 N N
55 C19 H17 C H sing 1.08 N N
56 C23 H18 C H sing 1.08 N N
57 C27 H19 C H sing 1.08 N N
58 C29 H20 C H sing 1.08 N N
59 C30 H21 C H sing 1.08 N N
60 C31 H22 C H sing 1.08 N N
61 C32 H23 C H sing 1.08 N N
62 C33 H24 C H sing 1.08 N N
63 C34 H25 C H sing 1.08 N N
64 C35 H26 C H sing 1.08 N N
65 C35 H27 C H sing 1.08 N N