Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : VXL    

Bonds between two atoms of the molecule

Total Number of Bonds: 91


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 CAA NBA C N sing 1.46 N N
2 CAB OBC C O sing 1.43 N N
3 CAC CBM C C sing 1.53 N N
4 CAD CBM C C sing 1.53 N N
5 OAE CBH O C doub 1.21 N N
6 OAF CBI O C doub 1.21 N N
7 OAG SBU O S doub 1.42 N N
8 OAH SBU O S doub 1.42 N N
9 OAI CBN O C sing 1.43 N N
10 CAL CAM C C doub 1.38 N Y
11 CAL CAN C C sing 1.38 N Y
12 CAM CAO C C sing 1.38 N Y
13 CAN CAP C C doub 1.38 N Y
14 CAO CBJ C C doub 1.38 N Y
15 CAP CBJ C C sing 1.38 N Y
16 CAQ CAS C C doub 1.38 N Y
17 CAQ CBK C C sing 1.39 N Y
18 CAR CAT C C sing 1.38 N Y
19 CAR CBK C C doub 1.39 N Y
20 CAS CBL C C sing 1.38 N Y
21 CAT CBL C C doub 1.38 N Y
22 CAU OBD C O sing 1.43 N N
23 CAU CBH C C sing 1.51 N N
24 CAV OBE C O sing 1.44 N N
25 CAV CBP C C sing 1.54 N N
26 CAW OBF C O sing 1.44 N N
27 CAW CBQ C C sing 1.54 N N
28 CAX CBJ C C sing 1.51 N N
29 CAX CBO C C sing 1.53 N N
30 CAY CBM C C sing 1.53 N N
31 CAY NBR C N sing 1.46 N N
32 CAZ CBN C C sing 1.53 N N
33 CAZ NBR C N sing 1.46 N N
34 NBA CBH N C sing 1.35 N N
35 NBB CBI N C sing 1.35 N N
36 NBB CBO N C sing 1.46 N N
37 OBC CBK O C sing 1.36 N N
38 OBD CBP O C sing 1.43 N N
39 OBE CBS O C sing 1.44 N N
40 OBF CBS O C sing 1.44 N N
41 OBG CBI O C sing 1.35 N N
42 OBG CBQ O C sing 1.45 N N
43 CBL SBU C S sing 1.76 N N
44 CBN CBO C C sing 1.53 N N
45 CBP CBT C C sing 1.54 N N
46 CBQ CBT C C sing 1.54 N N
47 NBR SBU N S sing 1.66 N N
48 CBS CBT C C sing 1.56 N N
49 CAA HAA C H sing 1.09 N N
50 CAA HAAA C H sing 1.09 N N
51 CAA HAAB C H sing 1.09 N N
52 CAB HAB C H sing 1.09 N N
53 CAB HABA C H sing 1.09 N N
54 CAB HABB C H sing 1.09 N N
55 CAC HAC C H sing 1.09 N N
56 CAC HACA C H sing 1.09 N N
57 CAC HACB C H sing 1.09 N N
58 CAD HAD C H sing 1.09 N N
59 CAD HADA C H sing 1.09 N N
60 CAD HADB C H sing 1.09 N N
61 OAI HOAI O H sing 0.97 N N
62 CAL HAL C H sing 1.08 N N
63 CAM HAM C H sing 1.08 N N
64 CAN HAN C H sing 1.08 N N
65 CAO HAO C H sing 1.08 N N
66 CAP HAP C H sing 1.08 N N
67 CAQ HAQ C H sing 1.08 N N
68 CAR HAR C H sing 1.08 N N
69 CAS HAS C H sing 1.08 N N
70 CAT HAT C H sing 1.08 N N
71 CAU HAU C H sing 1.09 N N
72 CAU HAUA C H sing 1.09 N N
73 CAV HAV C H sing 1.09 N N
74 CAV HAVA C H sing 1.09 N N
75 CAW HAW C H sing 1.09 N N
76 CAW HAWA C H sing 1.09 N N
77 CAX HAX C H sing 1.09 N N
78 CAX HAXA C H sing 1.09 N N
79 CAY HAY C H sing 1.09 N N
80 CAY HAYA C H sing 1.09 N N
81 CAZ HAZ C H sing 1.09 N N
82 CAZ HAZA C H sing 1.09 N N
83 NBA HNBA N H sing 0.97 N N
84 NBB HNBB N H sing 0.97 N N
85 CBM HBM C H sing 1.09 N N
86 CBN HBN C H sing 1.09 N N
87 CBO HBO C H sing 1.09 N N
88 CBP HBP C H sing 1.09 N N
89 CBQ HBQ C H sing 1.09 N N
90 CBS HBS C H sing 1.09 N N
91 CBT HBT C H sing 1.09 N N