Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : VXL

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 88


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 CAA C CAA N N N 0 -6.794 5.764 0.756
2 CAB C CAB N N N 0 10.178 0.955 -1.469
3 CAC C CAC N N N 0 5.892 -2.243 0.716
4 CAD C CAD N N N 0 4.773 -4.063 2.01
5 OAE O OAE N N N 0 -7.38 3.27 -0.082
6 OAF O OAF N N N 0 -2.038 -1.897 -1.353
7 OAG O OAG N N N 0 4.821 0.797 2.956
8 OAH O OAH N N N 0 3.374 1.916 1.252
9 OAI O OAI N N N 0 1.02 0.854 1.341
10 CAL C CAL N Y N 0 -2.382 -0.404 -4.601
11 CAM C CAM N Y N 0 -2.813 0.359 -3.532
12 CAN C CAN N Y N 0 -1.094 -0.907 -4.615
13 CAO C CAO N Y N 0 -1.956 0.622 -2.48
14 CAP C CAP N Y N 0 -0.237 -0.645 -3.563
15 CAQ C CAQ N Y N 0 6.576 1.617 -1.584
16 CAR C CAR N Y N 0 8.016 0.774 0.144
17 CAS C CAS N Y N 0 5.495 1.51 -0.731
18 CAT C CAT N Y N 0 6.931 0.669 0.993
19 CAU C CAU N N N 0 -5.773 2.101 1.191
20 CAV C CAV N N N 0 -6.491 -0.905 2.111
21 CAW C CAW N N N 0 -4.649 -3.396 0.021
22 CAX C CAX N N N 0 0.266 0.407 -1.348
23 CAY C CAY N N N 0 3.885 -1.73 2.112
24 CAZ C CAZ N N N 0 2.567 -0.639 0.239
25 NBA N NBA N N N 0 -6.109 4.551 1.208
26 NBB N NBB N N N 0 -1.221 -0.642 0.286
27 OBC O OBC N N N 0 8.906 1.352 -1.985
28 OBD O OBD N N N 0 -6.342 0.962 0.541
29 OBE O OBE N N N 0 -6.471 -2.326 1.857
30 OBF O OBF N N N 0 -6.064 -3.678 -0.013
31 OBG O OBG N N N 0 -3.475 -1.239 0.204
32 CBH C CBH N N N 0 -6.479 3.348 0.726
33 CBI C CBI N N N 0 -2.238 -1.282 -0.325
34 CBJ C CBJ N Y N 0 -0.668 0.12 -2.495
35 CBK C CBK N Y N 0 7.841 1.248 -1.148
36 CBL C CBL N Y N 0 5.672 1.036 0.556
37 CBM C CBM N N N 0 4.547 -2.777 1.214
38 CBN C CBN R N N 0 1.16 -0.467 0.815
39 CBO C CBO S N N 0 0.125 -0.689 -0.289
40 CBP C CBP R N N 0 -5.741 -0.28 0.914
41 CBQ C CBQ R N N 0 -4.522 -1.95 -0.508
42 NBR N NBR N N N 0 3.552 -0.545 1.319
43 CBS C CBS R N N 0 -6.71 -2.471 0.441
44 CBT C CBT S N N 0 -5.899 -1.318 -0.217
45 SBU S SBU N N N 0 4.29 0.902 1.642
46 HAA H HAA N N N 0 -6.679 5.866 -0.324
47 HAAA H HAAA N N N 0 -7.854 5.696 1.003
48 HAAB H HAAB N N N 0 -6.361 6.633 1.251
49 HAB H HAB N N N 0 10.426 1.568 -0.602
50 HABA H HABA N N N 0 10.139 -0.094 -1.173
51 HABB H HABB N N N 0 10.94 1.088 -2.237
52 HAC H HAC N N N 0 6.408 -3.023 0.156
53 HACA H HACA N N N 0 5.723 -1.383 0.068
54 HACB H HACB N N N 0 6.502 -1.943 1.568
55 HAD H HAD N N N 0 5.419 -3.855 2.863
56 HADA H HADA N N N 0 3.815 -4.444 2.365
57 HADB H HADB N N N 0 5.245 -4.809 1.37
58 HOAI H HOAI N N N 0 1.147 1.554 0.686
59 HAL H HAL N N N 0 -3.052 -0.613 -5.421
60 HAM H HAM N N N 0 -3.819 0.753 -3.521
61 HAN H HAN N N N 0 -0.757 -1.504 -5.45
62 HAO H HAO N N N 0 -2.293 1.219 -1.645
63 HAP H HAP N N N 0 0.769 -1.037 -3.575
64 HAQ H HAQ N N N 0 6.437 1.982 -2.59
65 HAR H HAR N N N 0 8.999 0.487 0.486
66 HAS H HAS N N N 0 4.51 1.797 -1.069
67 HAT H HAT N N N 0 7.067 0.299 1.998
68 HAU H HAU N N N 0 -5.889 1.999 2.27
69 HAUA H HAUA N N N 0 -4.714 2.169 0.944
70 HAV H HAV N N N 0 -7.518 -0.541 2.147
71 HAVA H HAVA N N N 0 -5.974 -0.679 3.043
72 HAW H HAW N N N 0 -4.273 -3.46 1.042
73 HAWA H HAWA N N N 0 -4.108 -4.086 -0.627
74 HAX H HAX N N N 0 1.293 0.43 -1.713
75 HAXA H HAXA N N N 0 0.015 1.372 -0.907
76 HAY H HAY N N N 0 2.974 -2.146 2.543
77 HAYA H HAYA N N N 0 4.571 -1.451 2.912
78 HAZ H HAZ N N N 0 2.646 -1.615 -0.241
79 HAZA H HAZA N N N 0 2.757 0.143 -0.496
80 HNBA H HNBA N N N 0 -5.388 4.614 1.854
81 HNBB H HNBB N N N 0 -1.381 -0.151 1.107
82 HBM H HBM N N N 0 3.901 -2.986 0.362
83 HBN H HBN N N N 0 1.003 -1.194 1.612
84 HBO H HBO N N N 0 0.289 -1.663 -0.751
85 HBP H HBP N N N 0 -4.688 -0.136 1.158
86 HBQ H HBQ N N N 0 -4.32 -1.952 -1.579
87 HBS H HBS N N N 0 -7.771 -2.446 0.192
88 HBT H HBT N N N 0 -6.372 -0.904 -1.108