Services
Research
Training
Industry
About us
Protein Data Bank
in Europe
Bringing Structure to Biology
Chemical Components in the PDB
pdbe.org/chem
Feedback
Share
Summary
Atoms
Bonds
In PDB Entries
Names
Descriptors
Complete Listing
Modify Search
Download Links
Molfile:
Ideal
Representative
PDB:
Ideal
Representative
Other:
mmCif
CML
Related compounds
Could not find any related compound in the PDB.
3D-Views
Ideal
Representative
PDB Links
PDB entries
PDBeChem : Chemical Bonds
Molecule :
VMQ
Bonds between two atoms of the molecule
Total Number of Bonds: 59
50
10 per page
20 per page
Show all
Record
First Atom
Second Atom
First Element
Second Element
Bond Order Type
Bond Length
Bond Stereochemistry
Is Aromatic
1
F35
C32
F
C
sing
1.4
N
N
2
F34
C32
F
C
sing
1.4
N
N
3
F33
C32
F
C
sing
1.4
N
N
4
C32
C30
C
C
sing
1.51
N
N
5
F24
C22
F
C
sing
1.4
N
N
6
F25
C22
F
C
sing
1.4
N
N
7
C22
C19
C
C
sing
1.51
N
N
8
C22
F23
C
F
sing
1.4
N
N
9
C30
C29
C
C
doub
1.38
N
Y
10
C30
C31
C
C
sing
1.38
N
Y
11
C29
C28
C
C
sing
1.38
N
Y
12
C20
C19
C
C
doub
1.38
N
Y
13
C20
C21
C
C
sing
1.38
N
Y
14
C19
C18
C
C
sing
1.38
N
Y
15
F38
C36
F
C
sing
1.4
N
N
16
C21
C16
C
C
doub
1.39
N
Y
17
C31
C26
C
C
doub
1.38
N
Y
18
C18
C17
C
C
doub
1.38
N
Y
19
C28
C36
C
C
sing
1.51
N
N
20
C28
C27
C
C
doub
1.38
N
Y
21
C36
F39
C
F
sing
1.4
N
N
22
C36
F37
C
F
sing
1.4
N
N
23
C16
C17
C
C
sing
1.39
N
Y
24
C16
C15
C
C
sing
1.48
N
N
25
C14
C15
C
C
doub
1.4
N
Y
26
C14
C13
C
C
sing
1.38
N
Y
27
C15
C10
C
C
sing
1.41
N
Y
28
C26
C27
C
C
sing
1.38
N
Y
29
C26
C6
C
C
sing
1.51
N
N
30
C13
N12
C
N
doub
1.32
N
Y
31
C10
C8
C
C
sing
1.48
N
N
32
C10
C11
C
C
doub
1.39
N
Y
33
O5
C4
O
C
doub
1.21
N
N
34
N7
C8
N
C
sing
1.35
N
N
35
N7
C6
N
C
sing
1.46
N
N
36
N12
C11
N
C
sing
1.32
N
Y
37
C8
O9
C
O
doub
1.22
N
N
38
C6
C4
C
C
sing
1.51
N
N
39
C4
N2
C
N
sing
1.35
N
N
40
C3
N2
C
N
sing
1.47
N
N
41
N2
C1
N
C
sing
1.47
N
N
42
C1
H1
C
H
sing
1.09
N
N
43
C1
H2
C
H
sing
1.09
N
N
44
C1
H3
C
H
sing
1.09
N
N
45
C11
H4
C
H
sing
1.08
N
N
46
C13
H5
C
H
sing
1.08
N
N
47
C14
H6
C
H
sing
1.08
N
N
48
C17
H7
C
H
sing
1.08
N
N
49
C18
H8
C
H
sing
1.08
N
N
50
C20
H9
C
H
sing
1.08
N
N
51
C21
H10
C
H
sing
1.08
N
N
52
C27
H11
C
H
sing
1.08
N
N
53
C29
H12
C
H
sing
1.08
N
N
54
C3
H13
C
H
sing
1.09
N
N
55
C3
H14
C
H
sing
1.09
N
N
56
C3
H15
C
H
sing
1.09
N
N
57
C31
H16
C
H
sing
1.08
N
N
58
C6
H17
C
H
sing
1.09
N
N
59
N7
H18
N
H
sing
0.97
N
N