Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : VD9    

Bonds between two atoms of the molecule

Total Number of Bonds: 27


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C14 C13 C C sing 1.53 N N
2 O4 S2 O S doub 1.42 N N
3 C13 C12 C C sing 1.53 N N
4 S2 O1 S O doub 1.42 N N
5 S2 C5 S C sing 1.76 N N
6 S2 N3 S N sing 1.66 N N
7 C10 C5 C C doub 1.38 N Y
8 C10 C9 C C sing 1.38 N Y
9 C5 C6 C C sing 1.38 N Y
10 C12 S11 C S sing 1.81 N N
11 C9 C8 C C doub 1.39 N Y
12 C6 C7 C C doub 1.38 N Y
13 C8 C7 C C sing 1.39 N Y
14 C8 S11 C S sing 1.76 N N
15 N3 H1 N H sing 0.97 N N
16 N3 H2 N H sing 0.97 N N
17 C10 H3 C H sing 1.08 N N
18 C9 H4 C H sing 1.08 N N
19 C7 H5 C H sing 1.08 N N
20 C6 H6 C H sing 1.08 N N
21 C12 H7 C H sing 1.09 N N
22 C12 H8 C H sing 1.09 N N
23 C13 H9 C H sing 1.09 N N
24 C13 H10 C H sing 1.09 N N
25 C14 H11 C H sing 1.09 N N
26 C14 H12 C H sing 1.09 N N
27 C14 H13 C H sing 1.09 N N