Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : V6B    

Bonds between two atoms of the molecule

Total Number of Bonds: 68


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C5 O1 C O sing 1.46 N N
2 C5 C4 C C sing 1.54 N N
3 O1 C6 O C sing 1.34 N N
4 C4 N1 C N sing 1.47 N N
5 C6 O2 C O doub 1.21 N N
6 C6 N1 C N sing 1.34 N N
7 N1 C3 N C sing 1.46 N N
8 C3 C2 C C sing 1.53 N N
9 C1 C2 C C sing 1.53 N N
10 C1 N C N sing 1.46 N N
11 BR C13 BR C sing 1.89 N N
12 N C N C sing 1.35 N N
13 C8 N2 C N doub 1.32 N Y
14 C8 C7 C C sing 1.4 N Y
15 N2 C9 N C sing 1.33 N Y
16 C C7 C C sing 1.47 N N
17 C O C O doub 1.22 N N
18 C7 C18 C C doub 1.41 N Y
19 C13 C12 C C doub 1.38 N Y
20 C13 C14 C C sing 1.38 N Y
21 C12 C11 C C sing 1.38 N Y
22 C9 N3 C N sing 1.38 N N
23 C9 N4 C N doub 1.33 N Y
24 N3 C10 N C sing 1.47 N N
25 C18 N4 C N sing 1.33 N Y
26 C18 N5 C N sing 1.38 N N
27 C15 C14 C C sing 1.51 N N
28 C14 C16 C C doub 1.38 N Y
29 C11 C10 C C sing 1.51 N N
30 C11 C17 C C doub 1.38 N Y
31 N5 C19 N C sing 1.47 N N
32 C23 C19 C C sing 1.54 N N
33 C23 C22 C C sing 1.55 N N
34 C16 C17 C C sing 1.38 N Y
35 C17 BR1 C BR sing 1.89 N N
36 C19 C20 C C sing 1.54 N N
37 C22 C21 C C sing 1.55 N N
38 C20 C21 C C sing 1.54 N N
39 C2 H1 C H sing 1.09 N N
40 C2 H2 C H sing 1.09 N N
41 N3 H3 N H sing 0.97 N N
42 C4 H4 C H sing 1.09 N N
43 C4 H5 C H sing 1.09 N N
44 C5 H6 C H sing 1.09 N N
45 C5 H7 C H sing 1.09 N N
46 C16 H8 C H sing 1.08 N N
47 C15 H9 C H sing 1.09 N N
48 C15 H10 C H sing 1.09 N N
49 C15 H11 C H sing 1.09 N N
50 C12 H12 C H sing 1.08 N N
51 C10 H13 C H sing 1.09 N N
52 C10 H14 C H sing 1.09 N N
53 C8 H15 C H sing 1.08 N N
54 N5 H16 N H sing 0.97 N N
55 C19 H17 C H sing 1.09 N N
56 C23 H18 C H sing 1.09 N N
57 C23 H19 C H sing 1.09 N N
58 C22 H20 C H sing 1.09 N N
59 C22 H21 C H sing 1.09 N N
60 C21 H22 C H sing 1.09 N N
61 C21 H23 C H sing 1.09 N N
62 C20 H24 C H sing 1.09 N N
63 C20 H25 C H sing 1.09 N N
64 N H26 N H sing 0.97 N N
65 C1 H27 C H sing 1.09 N N
66 C1 H28 C H sing 1.09 N N
67 C3 H29 C H sing 1.09 N N
68 C3 H30 C H sing 1.09 N N