Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : USQ    

Bonds between two atoms of the molecule

Total Number of Bonds: 65


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 N1 C2 N C sing 1.34 N N
2 N1 C6 N C sing 1.37 N N
3 N1 C1D N C sing 1.47 N N
4 C2 N3 C N sing 1.35 N N
5 C2 O2 C O doub 1.22 N N
6 N3 C4 N C sing 1.35 N N
7 N3 HN3 N H sing 0.97 N N
8 C4 C5 C C sing 1.42 N N
9 C4 O4 C O doub 1.22 N N
10 C5 C6 C C doub 1.35 N N
11 C5 H5 C H sing 1.08 N N
12 C6 H6 C H sing 1.08 N N
13 C1D C2D C C sing 1.55 N N
14 C1D O4D C O sing 1.44 N N
15 C1D H1D C H sing 1.09 N N
16 C2D O2D C O sing 1.43 N N
17 C2D C3D C C sing 1.55 N N
18 C2D H2D C H sing 1.09 N N
19 O2D HO2' O H sing 0.97 N N
20 C3D C4D C C sing 1.54 N N
21 C3D O3D C O sing 1.43 N N
22 C3D H3D C H sing 1.09 N N
23 C4D O4D C O sing 1.44 N N
24 C4D C5D C C sing 1.53 N N
25 C4D H4D C H sing 1.09 N N
26 O3D HO3' O H sing 0.97 N N
27 C5D O5D C O sing 1.43 N N
28 C5D H5'1 C H sing 1.09 N N
29 C5D H5'2 C H sing 1.09 N N
30 O5D PA O P sing 1.61 N N
31 PA O1A P O doub 1.48 N N
32 PA O2A P O sing 1.61 N N
33 PA O3A P O sing 1.61 N N
34 O2A HOA2 O H sing 0.97 N N
35 O3A PB O P sing 1.61 N N
36 PB O1B P O doub 1.48 N N
37 PB O2B P O sing 1.61 N N
38 PB O3B P O sing 1.61 N N
39 O2B HOB2 O H sing 0.97 N N
40 O3B C1' O C sing 1.43 N N
41 C1' C2' C C sing 1.53 N N
42 C1' O5' C O sing 1.43 N N
43 C1' H1' C H sing 1.09 N N
44 C2' C3' C C sing 1.53 N N
45 C2' O2' C O sing 1.43 N N
46 C2' H2' C H sing 1.09 N N
47 C3' C4' C C sing 1.53 N N
48 C3' O3' C O sing 1.43 N N
49 C3' H3' C H sing 1.09 N N
50 C4' C5' C C sing 1.53 N N
51 C4' O4' C O sing 1.43 N N
52 C4' H4' C H sing 1.09 N N
53 C5' C6' C C sing 1.53 N N
54 C5' O5' C O sing 1.43 N N
55 C5' H5' C H sing 1.09 N N
56 C6' S C S sing 1.81 N N
57 C6' H6'1 C H sing 1.09 N N
58 C6' H6'2 C H sing 1.09 N N
59 O2' HO2A O H sing 0.97 N N
60 O3' HO3A O H sing 0.97 N N
61 O4' HO4' O H sing 0.97 N N
62 S O1S S O doub 1.42 N N
63 S O2S S O sing 1.52 N N
64 S O3S S O doub 1.42 N N
65 O2S HXT O H sing 0.97 N N