Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : URK    

Bonds between two atoms of the molecule

Total Number of Bonds: 50


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 O3 N1 O N sing 1.22 N N
2 O2 N1 O N doub 1.22 N N
3 N1 C8 N C sing 1.48 N N
4 C9 C8 C C doub 1.38 N Y
5 C9 C10 C C sing 1.38 N Y
6 C8 C7 C C sing 1.38 N Y
7 C19 C18 C C doub 1.38 N Y
8 C19 C20 C C sing 1.38 N Y
9 C18 C16 C C sing 1.38 N Y
10 C10 C5 C C doub 1.38 N Y
11 C20 C13 C C doub 1.38 N Y
12 C7 C6 C C doub 1.38 N Y
13 C16 O5 C O sing 1.36 N N
14 C16 C14 C C doub 1.39 N Y
15 C5 C6 C C sing 1.38 N Y
16 C5 C4 C C sing 1.51 N N
17 C13 C14 C C sing 1.39 N Y
18 C13 C12 C C sing 1.51 N N
19 C17 O5 C O sing 1.43 N N
20 N2 C11 N C sing 1.35 N N
21 N2 C12 N C sing 1.47 N N
22 O6 C11 O C doub 1.21 N N
23 C14 O4 C O sing 1.36 N N
24 C11 C4 C C sing 1.51 N N
25 C4 O1 C O sing 1.45 N N
26 O4 C15 O C sing 1.43 N N
27 O1 C3 O C sing 1.35 N N
28 C3 O7 C O doub 1.22 N N
29 C3 C2 C C sing 1.47 N N
30 C2 C1 C C doub 1.33 N N
31 C1 H1 C H sing 1.08 N N
32 C1 H2 C H sing 1.08 N N
33 C2 H4 C H sing 1.08 N N
34 C4 H6 C H sing 1.09 N N
35 C6 H7 C H sing 1.08 N N
36 C7 H8 C H sing 1.08 N N
37 C9 H9 C H sing 1.08 N N
38 C10 H10 C H sing 1.08 N N
39 N2 H11 N H sing 0.97 N N
40 C12 H12 C H sing 1.09 N N
41 C12 H13 C H sing 1.09 N N
42 C15 H14 C H sing 1.09 N N
43 C15 H15 C H sing 1.09 N N
44 C15 H16 C H sing 1.09 N N
45 C17 H17 C H sing 1.09 N N
46 C17 H18 C H sing 1.09 N N
47 C17 H19 C H sing 1.09 N N
48 C18 H20 C H sing 1.08 N N
49 C19 H21 C H sing 1.08 N N
50 C20 H22 C H sing 1.08 N N