data_URK
#
_chem_comp.id URK
_chem_comp.name '[(1S)-2-[(2,3-dimethoxyphenyl)methylamino]-1-(4-nitrophenyl)-2-oxidanylidene-ethyl] prop-2-enoate'
_chem_comp.type non-polymer
_chem_comp.pdbx_type HETAIN
_chem_comp.formula 'C20 H20 N2 O7'
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms
'[(1~{S})-2-[(2,3-dimethoxyphenyl)methylamino]-1-(4-nitrophenyl)-2-oxidanylidene-ethyl] prop-2-enoate; FSP006'
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2021-03-10
_chem_comp.pdbx_modified_date 2024-09-27
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 400.382
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code URK
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 7NT2
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site PDBE
_chem_comp.pdbx_pcm Y
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
URK C1 C1 C 0 1 N N N N N N 21.039 2.854 -24.373 6.033 -3.721 0.262 C1 URK 1
URK C2 C2 C 0 1 N N N N N N 20.142 3.893 -24.955 5.419 -2.643 -0.220 C2 URK 2
URK C3 C3 C 0 1 N N N N N N 20.854 4.827 -25.892 4.098 -2.258 0.296 C3 URK 3
URK O1 O1 O 0 1 N N N N N N 20.961 4.303 -27.132 3.476 -1.166 -0.192 O1 URK 4
URK C4 C4 C 0 1 N N S N N N 21.192 5.229 -28.225 2.173 -0.846 0.365 C4 URK 5
URK C5 C5 C 0 1 Y N N N N N 21.800 4.462 -29.377 1.959 0.645 0.315 C5 URK 6
URK C6 C6 C 0 1 Y N N N N N 22.515 3.298 -29.131 1.349 1.291 1.375 C6 URK 7
URK C7 C7 C 0 1 Y N N N N N 23.067 2.568 -30.165 1.152 2.658 1.329 C7 URK 8
URK C8 C8 C 0 1 Y N N N N N 22.895 3.034 -31.464 1.564 3.380 0.224 C8 URK 9
URK N1 N1 N 1 1 N N N N N N 23.452 2.260 -32.548 1.352 4.844 0.175 N1 URK 10
URK O2 O2 O 0 1 N N N N N N 24.589 2.495 -32.914 0.815 5.413 1.108 O2 URK 11
URK O3 O3 O -1 1 N N N N N N 22.756 1.386 -33.028 1.715 5.479 -0.799 O3 URK 12
URK C9 C9 C 0 1 Y N N N N N 22.171 4.189 -31.750 2.174 2.734 -0.835 C9 URK 13
URK C10 C10 C 0 1 Y N N N N N 21.638 4.898 -30.690 2.376 1.367 -0.787 C10 URK 14
URK C11 C11 C 0 1 N N N N N N 19.868 5.907 -28.652 1.101 -1.535 -0.439 C11 URK 15
URK N2 N2 N 0 1 N N N N N N 19.947 7.212 -28.932 -0.186 -1.464 -0.045 N2 URK 16
URK C12 C12 C 0 1 N N N N N N 19.099 8.223 -28.295 -1.229 -2.134 -0.826 C12 URK 17
URK C13 C13 C 0 1 Y N N N N N 18.212 9.029 -29.212 -2.570 -1.902 -0.177 C13 URK 18
URK C14 C14 C 0 1 Y N N N N N 17.385 10.013 -28.662 -3.238 -0.705 -0.376 C14 URK 19
URK O4 O4 O 0 1 N N N N N N 17.428 10.204 -27.304 -2.686 0.262 -1.157 O4 URK 20
URK C15 C15 C 0 1 N N N N N N 16.428 9.528 -26.540 -3.002 0.231 -2.550 C15 URK 21
URK C16 C16 C 0 1 Y N N N N N 16.537 10.784 -29.483 -4.476 -0.495 0.224 C16 URK 22
URK O5 O5 O 0 1 N N N N N N 15.790 11.738 -28.834 -5.136 0.679 0.031 O5 URK 23
URK C17 C17 C 0 1 N N N N N N 14.390 11.823 -29.095 -6.402 0.825 0.678 C17 URK 24
URK C18 C18 C 0 1 Y N N N N N 16.534 10.560 -30.849 -5.034 -1.483 1.018 C18 URK 25
URK C19 C19 C 0 1 Y N N N N N 17.341 9.580 -31.396 -4.362 -2.676 1.212 C19 URK 26
URK C20 C20 C 0 1 Y N N N N N 18.169 8.832 -30.590 -3.135 -2.887 0.612 C20 URK 27
URK O6 O6 O 0 1 N N N N N N 18.842 5.231 -28.796 1.395 -2.153 -1.440 O6 URK 28
URK O7 O7 O 0 1 N N N N N N 21.260 5.920 -25.595 3.566 -2.924 1.163 O7 URK 29
URK H1 H1 H 0 1 N N N N N N 22.085 2.832 -24.641 5.561 -4.312 1.032 H1 URK 30
URK H2 H2 H 0 1 N N N N N N 20.643 2.123 -23.684 7.002 -4.006 -0.121 H2 URK 31
URK H4 H4 H 0 1 N N N N N N 19.089 3.967 -24.727 5.891 -2.051 -0.990 H4 URK 32
URK H6 H6 H 0 1 N N N N N N 21.897 6.011 -27.906 2.127 -1.186 1.400 H6 URK 33
URK H7 H7 H 0 1 N N N N N N 22.642 2.958 -28.114 1.027 0.727 2.238 H7 URK 34
URK H8 H8 H 0 1 N N N N N N 23.618 1.660 -29.970 0.675 3.163 2.156 H8 URK 35
URK H9 H9 H 0 1 N N N N N N 22.030 4.520 -32.768 2.496 3.297 -1.698 H9 URK 36
URK H10 H10 H 0 1 N N N N N N 21.086 5.806 -30.883 2.853 0.862 -1.614 H10 URK 37
URK H11 H11 H 0 1 N N N N N N 20.618 7.513 -29.610 -0.422 -0.970 0.756 H11 URK 38
URK H12 H12 H 0 1 N N N N N N 19.758 8.926 -27.764 -1.241 -1.730 -1.839 H12 URK 39
URK H13 H13 H 0 1 N N N N N N 18.451 7.708 -27.570 -1.024 -3.204 -0.864 H13 URK 40
URK H14 H14 H 0 1 N N N N N N 16.564 9.757 -25.473 -2.498 1.054 -3.056 H14 URK 41
URK H15 H15 H 0 1 N N N N N N 15.431 9.864 -26.862 -2.669 -0.715 -2.977 H15 URK 42
URK H16 H16 H 0 1 N N N N N N 16.518 8.443 -26.697 -4.080 0.329 -2.681 H16 URK 43
URK H17 H17 H 0 1 N N N N N N 13.953 12.635 -28.495 -6.819 1.804 0.442 H17 URK 44
URK H18 H18 H 0 1 N N N N N N 14.228 12.029 -30.163 -7.080 0.046 0.329 H18 URK 45
URK H19 H19 H 0 1 N N N N N N 13.909 10.870 -28.828 -6.271 0.736 1.757 H19 URK 46
URK H20 H20 H 0 1 N N N N N N 15.899 11.153 -31.490 -5.995 -1.322 1.485 H20 URK 47
URK H21 H21 H 0 1 N N N N N N 17.322 9.400 -32.461 -4.799 -3.445 1.831 H21 URK 48
URK H22 H22 H 0 1 N N N N N N 18.799 8.076 -31.036 -2.613 -3.819 0.766 H22 URK 49
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
URK O3 N1 SING N N 1
URK O2 N1 DOUB N N 2
URK N1 C8 SING N N 3
URK C9 C8 DOUB Y N 4
URK C9 C10 SING Y N 5
URK C8 C7 SING Y N 6
URK C19 C18 DOUB Y N 7
URK C19 C20 SING Y N 8
URK C18 C16 SING Y N 9
URK C10 C5 DOUB Y N 10
URK C20 C13 DOUB Y N 11
URK C7 C6 DOUB Y N 12
URK C16 O5 SING N N 13
URK C16 C14 DOUB Y N 14
URK C5 C6 SING Y N 15
URK C5 C4 SING N N 16
URK C13 C14 SING Y N 17
URK C13 C12 SING N N 18
URK C17 O5 SING N N 19
URK N2 C11 SING N N 20
URK N2 C12 SING N N 21
URK O6 C11 DOUB N N 22
URK C14 O4 SING N N 23
URK C11 C4 SING N N 24
URK C4 O1 SING N N 25
URK O4 C15 SING N N 26
URK O1 C3 SING N N 27
URK C3 O7 DOUB N N 28
URK C3 C2 SING N N 29
URK C2 C1 DOUB N N 30
URK C1 H1 SING N N 31
URK C1 H2 SING N N 32
URK C2 H4 SING N N 33
URK C4 H6 SING N N 34
URK C6 H7 SING N N 35
URK C7 H8 SING N N 36
URK C9 H9 SING N N 37
URK C10 H10 SING N N 38
URK N2 H11 SING N N 39
URK C12 H12 SING N N 40
URK C12 H13 SING N N 41
URK C15 H14 SING N N 42
URK C15 H15 SING N N 43
URK C15 H16 SING N N 44
URK C17 H17 SING N N 45
URK C17 H18 SING N N 46
URK C17 H19 SING N N 47
URK C18 H20 SING N N 48
URK C19 H21 SING N N 49
URK C20 H22 SING N N 50
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
URK InChI InChI 1.03 'InChI=1S/C20H20N2O7/c1-4-17(23)29-19(13-8-10-15(11-9-13)22(25)26)20(24)21-12-14-6-5-7-16(27-2)18(14)28-3/h4-11,19H,1,12H2,2-3H3,(H,21,24)/t19-/m0/s1'
URK InChIKey InChI 1.03 KRUSHXMEHBIKCV-IBGZPJMESA-N
URK SMILES_CANONICAL CACTVS 3.385 'COc1cccc(CNC(=O)[C@@H](OC(=O)C=C)c2ccc(cc2)[N+]([O-])=O)c1OC'
URK SMILES CACTVS 3.385 'COc1cccc(CNC(=O)[CH](OC(=O)C=C)c2ccc(cc2)[N+]([O-])=O)c1OC'
URK SMILES_CANONICAL 'OpenEye OEToolkits' 2.0.7 'COc1cccc(c1OC)CNC(=O)[C@H](c2ccc(cc2)[N+](=O)[O-])OC(=O)C=C'
URK SMILES 'OpenEye OEToolkits' 2.0.7 'COc1cccc(c1OC)CNC(=O)C(c2ccc(cc2)[N+](=O)[O-])OC(=O)C=C'
#
_pdbx_chem_comp_identifier.comp_id URK
_pdbx_chem_comp_identifier.type 'SYSTEMATIC NAME'
_pdbx_chem_comp_identifier.program 'OpenEye OEToolkits'
_pdbx_chem_comp_identifier.program_version 2.0.7
_pdbx_chem_comp_identifier.identifier
'[(1~{S})-2-[(2,3-dimethoxyphenyl)methylamino]-1-(4-nitrophenyl)-2-oxidanylidene-ethyl] prop-2-enoate'
#
loop_
_pdbx_chem_comp_synonyms.ordinal
_pdbx_chem_comp_synonyms.comp_id
_pdbx_chem_comp_synonyms.name
_pdbx_chem_comp_synonyms.provenance
_pdbx_chem_comp_synonyms.type
1 URK '[(1~{S})-2-[(2,3-dimethoxyphenyl)methylamino]-1-(4-nitrophenyl)-2-oxidanylidene-ethyl] prop-2-enoate' PDB ?
2 URK FSP006 AUTHOR ?
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
URK 'Create component' 2021-03-10 PDBE
URK 'Initial release' 2021-06-16 RCSB
URK 'Modify PCM' 2024-09-27 PDBE
#
_pdbx_chem_comp_pcm.pcm_id 1
_pdbx_chem_comp_pcm.comp_id URK
_pdbx_chem_comp_pcm.modified_residue_id CYS
_pdbx_chem_comp_pcm.type None
_pdbx_chem_comp_pcm.category 'Covalent chemical modification'
_pdbx_chem_comp_pcm.position 'Amino-acid side chain'
_pdbx_chem_comp_pcm.polypeptide_position 'Any position'
_pdbx_chem_comp_pcm.comp_id_linking_atom C1
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom SG
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession ?
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession ?
#
loop_
_pdbe_chem_comp_synonyms.comp_id
_pdbe_chem_comp_synonyms.name
_pdbe_chem_comp_synonyms.provenance
_pdbe_chem_comp_synonyms.type
URK '[(1~{S})-2-[(2,3-dimethoxyphenyl)methylamino]-1-(4-nitrophenyl)-2-oxidanylidene-ethyl] prop-2-enoate' wwPDB ?
URK FSP006 wwPDB ?
#
loop_
_software.name
_software.version
_software.description
rdkit 2025.03.3 'Core functionality.'
pdbeccdutils 1.0.0 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
URK C1 C 6.897 -4.500 1
URK C2 C 8.196 -3.750 2
URK C3 C 8.196 -2.250 3
URK O1 O 9.495 -1.500 4
URK C4 C 9.495 0.000 5
URK C5 C 8.196 0.750 6
URK C6 C 6.897 0.000 7
URK C7 C 5.598 0.750 8
URK C8 C 5.598 2.250 9
URK N1 N 4.299 3.000 10
URK O2 O 3.000 2.250 11
URK O3 O 4.299 4.500 12
URK C9 C 6.897 3.000 13
URK C10 C 8.196 2.250 14
URK C11 C 10.794 0.750 15
URK N2 N 12.093 0.000 16
URK C12 C 13.392 0.750 17
URK C13 C 14.691 0.000 18
URK C14 C 15.990 0.750 19
URK O4 O 15.990 2.250 20
URK C15 C 17.290 3.000 21
URK C16 C 17.290 0.000 22
URK O5 O 18.588 0.750 23
URK C17 C 19.887 0.000 24
URK C18 C 17.290 -1.500 25
URK C19 C 15.990 -2.250 26
URK C20 C 14.691 -1.500 27
URK O6 O 10.794 2.250 28
URK O7 O 6.897 -1.500 29
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
URK O3 N1 SINGLE NONE 1
URK O2 N1 DOUBLE NONE 2
URK N1 C8 SINGLE NONE 3
URK C9 C8 DOUBLE NONE 4
URK C9 C10 SINGLE NONE 5
URK C8 C7 SINGLE NONE 6
URK C19 C18 DOUBLE NONE 7
URK C19 C20 SINGLE NONE 8
URK C18 C16 SINGLE NONE 9
URK C10 C5 DOUBLE NONE 10
URK C20 C13 DOUBLE NONE 11
URK C7 C6 DOUBLE NONE 12
URK C16 O5 SINGLE NONE 13
URK C16 C14 DOUBLE NONE 14
URK C5 C6 SINGLE NONE 15
URK C5 C4 SINGLE NONE 16
URK C13 C14 SINGLE NONE 17
URK C13 C12 SINGLE NONE 18
URK C17 O5 SINGLE NONE 19
URK N2 C11 SINGLE NONE 20
URK N2 C12 SINGLE NONE 21
URK O6 C11 DOUBLE NONE 22
URK C14 O4 SINGLE NONE 23
URK C11 C4 SINGLE NONE 24
URK C4 O1 SINGLE BEGINWEDGE 25
URK O4 C15 SINGLE NONE 26
URK O1 C3 SINGLE NONE 27
URK C3 O7 DOUBLE NONE 28
URK C3 C2 SINGLE NONE 29
URK C2 C1 DOUBLE NONE 30
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
URK MurckoScaffold S1 scaffold O=C(Cc1ccccc1)NCc1ccccc1 InChI=1S/C15H15NO/c17-15(11-13-7-3-1-4-8-13)16-12-14-9-5-2-6-10-14/h1-10H,11-12H2,(H,16,17) CPKRCGUDZGKAPJ-UHFFFAOYSA-N
URK amide F1 fragment CC(N)=O InChI=1S/C2H5NO/c1-2(3)4/h1H3,(H2,3,4) DLFVBJFMPXGRIB-UHFFFAOYSA-N
URK phenyl F2 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
URK Z31478538 F3 fragment COCC(=O)NCc1ccccc1 InChI=1S/C10H13NO2/c1-13-8-10(12)11-7-9-5-3-2-4-6-9/h2-6H,7-8H2,1H3,(H,11,12) VLAPGEODGZEQPC-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
URK C4 S1 1
URK C5 S1 1
URK C6 S1 1
URK C7 S1 1
URK C8 S1 1
URK C9 S1 1
URK C10 S1 1
URK C11 S1 1
URK N2 S1 1
URK C12 S1 1
URK C13 S1 1
URK C14 S1 1
URK C16 S1 1
URK C18 S1 1
URK C19 S1 1
URK C20 S1 1
URK O6 S1 1
URK N2 F1 1
URK C11 F1 1
URK O6 F1 1
URK C4 F1 1
URK C5 F2 1
URK C10 F2 1
URK C9 F2 1
URK C8 F2 1
URK C7 F2 1
URK C6 F2 1
URK C13 F2 2
URK C20 F2 2
URK C19 F2 2
URK C18 F2 2
URK C16 F2 2
URK C14 F2 2
URK C3 F3 1
URK O1 F3 1
URK C4 F3 1
URK C11 F3 1
URK O6 F3 1
URK N2 F3 1
URK C12 F3 1
URK C13 F3 1
URK C20 F3 1
URK C19 F3 1
URK C18 F3 1
URK C16 F3 1
URK C14 F3 1
#
_pdbe_chem_comp_rdkit_properties.comp_id URK
_pdbe_chem_comp_rdkit_properties.exactmw 400.127
_pdbe_chem_comp_rdkit_properties.amw 400.387
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 9
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 1
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 11
_pdbe_chem_comp_rdkit_properties.NumHBD 1
_pdbe_chem_comp_rdkit_properties.NumHBA 7
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 29
_pdbe_chem_comp_rdkit_properties.NumAtoms 49
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 9
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 1
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.200
_pdbe_chem_comp_rdkit_properties.NumRings 2
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 2
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 0
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 1
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 194.742
_pdbe_chem_comp_rdkit_properties.tpsa 117
_pdbe_chem_comp_rdkit_properties.CrippenClogP 1.284
_pdbe_chem_comp_rdkit_properties.CrippenMR 100.943
_pdbe_chem_comp_rdkit_properties.chi0v 13.752
_pdbe_chem_comp_rdkit_properties.chi1v 6.919
_pdbe_chem_comp_rdkit_properties.chi2v 2.783
_pdbe_chem_comp_rdkit_properties.chi3v 2.783
_pdbe_chem_comp_rdkit_properties.chi4v 1.614
_pdbe_chem_comp_rdkit_properties.chi0n 33.752
_pdbe_chem_comp_rdkit_properties.chi1n 16.866
_pdbe_chem_comp_rdkit_properties.chi2n 2.783
_pdbe_chem_comp_rdkit_properties.chi3n 2.783
_pdbe_chem_comp_rdkit_properties.chi4n 1.614
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -3.880
_pdbe_chem_comp_rdkit_properties.kappa1 6.871
_pdbe_chem_comp_rdkit_properties.kappa2 9.882
_pdbe_chem_comp_rdkit_properties.kappa3 5.315
_pdbe_chem_comp_rdkit_properties.Phi 2.341
#
_pdbe_chem_comp_external_mappings.comp_id URK
_pdbe_chem_comp_external_mappings.source UniChem
_pdbe_chem_comp_external_mappings.resource PubChem
_pdbe_chem_comp_external_mappings.resource_id 156022783
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
URK C1 -2.065 -1.096 2.884 ETKDGv3 1
URK C2 -0.778 -0.938 2.581 ETKDGv3 2
URK C3 -0.296 0.162 1.732 ETKDGv3 3
URK O1 1.065 0.228 1.415 ETKDGv3 4
URK C4 1.597 1.117 0.431 ETKDGv3 5
URK C5 3.103 1.171 0.545 ETKDGv3 6
URK C6 3.876 -0.051 0.885 ETKDGv3 7
URK C7 5.213 -0.013 0.946 ETKDGv3 8
URK C8 5.945 1.249 0.670 ETKDGv3 9
URK N1 7.382 1.279 0.744 ETKDGv3 10
URK O2 8.016 2.330 0.513 ETKDGv3 11
URK O3 8.082 0.142 1.074 ETKDGv3 12
URK C9 5.242 2.352 0.347 ETKDGv3 13
URK C10 3.767 2.308 0.273 ETKDGv3 14
URK C11 1.189 0.646 -0.939 ETKDGv3 15
URK N2 0.111 1.292 -1.630 ETKDGv3 16
URK C12 -0.633 0.626 -2.697 ETKDGv3 17
URK C13 -1.445 -0.509 -2.124 ETKDGv3 18
URK C14 -2.644 -0.215 -1.285 ETKDGv3 19
URK O4 -3.004 1.142 -1.149 ETKDGv3 20
URK C15 -4.080 1.672 -0.383 ETKDGv3 21
URK C16 -3.316 -1.241 -0.696 ETKDGv3 22
URK O5 -4.438 -0.989 0.107 ETKDGv3 23
URK C17 -5.188 -1.991 0.784 ETKDGv3 24
URK C18 -2.846 -2.637 -0.914 ETKDGv3 25
URK C19 -1.778 -2.886 -1.674 ETKDGv3 26
URK C20 -1.042 -1.778 -2.299 ETKDGv3 27
URK O6 1.740 -0.372 -1.441 ETKDGv3 28
URK O7 -1.097 1.034 1.295 ETKDGv3 29
URK H1 -2.374 -1.927 3.505 ETKDGv3 30
URK H2 -2.821 -0.412 2.521 ETKDGv3 31
URK H4 -0.058 -1.652 2.960 ETKDGv3 32
URK H6 1.188 2.137 0.617 ETKDGv3 33
URK H7 3.362 -0.984 1.080 ETKDGv3 34
URK H8 5.756 -0.915 1.196 ETKDGv3 35
URK H9 5.741 3.288 0.133 ETKDGv3 36
URK H10 3.232 3.207 -0.007 ETKDGv3 37
URK H11 -0.234 2.217 -1.289 ETKDGv3 38
URK H12 -1.319 1.356 -3.179 ETKDGv3 39
URK H13 0.071 0.278 -3.485 ETKDGv3 40
URK H14 -4.077 2.777 -0.479 ETKDGv3 41
URK H15 -5.050 1.295 -0.769 ETKDGv3 42
URK H16 -3.952 1.419 0.690 ETKDGv3 43
URK H17 -5.633 -2.695 0.051 ETKDGv3 44
URK H18 -4.537 -2.539 1.497 ETKDGv3 45
URK H19 -6.007 -1.506 1.354 ETKDGv3 46
URK H20 -3.363 -3.472 -0.462 ETKDGv3 47
URK H21 -1.444 -3.904 -1.825 ETKDGv3 48
URK H22 -0.161 -2.005 -2.887 ETKDGv3 49
#