Chemical Components in the PDB

pdbe.org/chem
wwPDB
EMDataBank
spacer

PDBeChem : Chemical Bonds

 Molecule : SVR    

Bonds between two atoms of the molecule

Total Number of Bonds: 133


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 O35 S31 O S doub 1.42 N N
2 S31 O36 S O doub 1.42 N N
3 S31 O34 S O sing 1.52 N N
4 S31 C22 S C sing 1.76 N N
5 O34 H34 O H sing 0.97 N N
6 C22 C18 C C doub 1.39 N Y
7 C22 C16 C C sing 1.36 N Y
8 C18 C11 C C sing 1.36 N Y
9 C18 H18 C H sing 1.08 N N
10 C11 S17 C S sing 1.76 N N
11 C11 C6 C C doub 1.4 N Y
12 S17 O23 S O doub 1.42 N N
13 S17 O24 S O doub 1.42 N N
14 S17 O25 S O sing 1.52 N N
15 O25 H25 O H sing 0.97 N N
16 C16 C10 C C doub 1.41 N Y
17 C16 H16 C H sing 1.08 N N
18 C10 C15 C C sing 1.41 N Y
19 C10 C6 C C sing 1.42 N Y
20 C15 S21 C S sing 1.76 N N
21 C15 C12 C C doub 1.36 N Y
22 S21 O28 S O doub 1.42 N N
23 S21 O29 S O doub 1.42 N N
24 S21 O30 S O sing 1.52 N N
25 O30 H30 O H sing 0.97 N N
26 C12 C7 C C sing 1.39 N Y
27 C12 H12 C H sing 1.08 N N
28 C7 C3 C C doub 1.38 N Y
29 C7 H7 C H sing 1.08 N N
30 C6 C3 C C sing 1.41 N Y
31 C3 N1 C N sing 1.4 N N
32 N1 C2 N C sing 1.35 N N
33 N1 HN1 N H sing 0.97 N N
34 C2 O4 C O doub 1.22 N N
35 C2 C5 C C sing 1.48 N N
36 C5 C8 C C doub 1.39 N Y
37 C5 C9 C C sing 1.4 N Y
38 C8 C13 C C sing 1.39 N Y
39 C8 H8 C H sing 1.08 N N
40 C9 C14 C C doub 1.38 N Y
41 C9 H9 C H sing 1.08 N N
42 C14 C20 C C sing 1.38 N Y
43 C14 H14 C H sing 1.08 N N
44 C20 C27 C C sing 1.51 N N
45 C20 C13 C C doub 1.39 N Y
46 C27 H271 C H sing 1.09 N N
47 C27 H272 C H sing 1.09 N N
48 C27 H273 C H sing 1.09 N N
49 C13 N19 C N sing 1.4 N N
50 N19 C26 N C sing 1.35 N N
51 N19 H19 N H sing 0.97 N N
52 C26 O32 C O doub 1.22 N N
53 C26 C33 C C sing 1.48 N N
54 C33 C37 C C doub 1.39 N Y
55 C33 C38 C C sing 1.4 N Y
56 C37 C39 C C sing 1.39 N Y
57 C37 H37 C H sing 1.08 N N
58 C38 C40 C C doub 1.38 N Y
59 C38 H38 C H sing 1.08 N N
60 C40 C42 C C sing 1.38 N Y
61 C40 H40 C H sing 1.08 N N
62 C42 C39 C C doub 1.39 N Y
63 C42 H42 C H sing 1.08 N N
64 C39 N41 C N sing 1.4 N N
65 N41 C43 N C sing 1.35 N N
66 N41 H41 N H sing 0.97 N N
67 C43 O45 C O doub 1.22 N N
68 C43 N44 C N sing 1.35 N N
69 N44 C46 N C sing 1.4 N N
70 N44 H44 N H sing 0.97 N N
71 C46 C47 C C doub 1.39 N Y
72 C46 C48 C C sing 1.39 N Y
73 C47 C49 C C sing 1.39 N Y
74 C47 H47 C H sing 1.08 N N
75 C48 C50 C C doub 1.38 N Y
76 C48 H48 C H sing 1.08 N N
77 C50 C52 C C sing 1.38 N Y
78 C50 H50 C H sing 1.08 N N
79 C52 C49 C C doub 1.4 N Y
80 C52 H52 C H sing 1.08 N N
81 C49 C51 C C sing 1.48 N N
82 C51 O54 C O doub 1.22 N N
83 C51 N53 C N sing 1.35 N N
84 N53 C55 N C sing 1.4 N N
85 N53 H53 N H sing 0.97 N N
86 C55 C56 C C doub 1.39 N Y
87 C55 C57 C C sing 1.39 N Y
88 C56 C58 C C sing 1.4 N Y
89 C56 H56 C H sing 1.08 N N
90 C57 C59 C C sing 1.51 N N
91 C57 C60 C C doub 1.38 N Y
92 C59 H591 C H sing 1.09 N N
93 C59 H592 C H sing 1.09 N N
94 C59 H593 C H sing 1.09 N N
95 C60 C62 C C sing 1.38 N Y
96 C60 H60 C H sing 1.08 N N
97 C62 C58 C C doub 1.4 N Y
98 C62 H62 C H sing 1.08 N N
99 C58 C61 C C sing 1.48 N N
100 C61 O64 C O doub 1.22 N N
101 C61 N63 C N sing 1.35 N N
102 N63 C65 N C sing 1.39 N N
103 N63 H63 N H sing 0.97 N N
104 C65 C67 C C doub 1.38 N Y
105 C65 C66 C C sing 1.41 N Y
106 C67 C70 C C sing 1.39 N Y
107 C67 H67 C H sing 1.08 N N
108 C70 C71 C C doub 1.36 N Y
109 C70 H70 C H sing 1.08 N N
110 C71 S75 C S sing 1.76 N N
111 C71 C68 C C sing 1.41 N Y
112 S75 O80 S O doub 1.42 N N
113 S75 O81 S O doub 1.42 N N
114 S75 O82 S O sing 1.52 N N
115 O82 H82 O H sing 0.97 N N
116 C66 C68 C C doub 1.42 N Y
117 C66 C69 C C sing 1.4 N Y
118 C68 C72 C C sing 1.41 N Y
119 C72 C76 C C doub 1.36 N Y
120 C72 H72 C H sing 1.08 N N
121 C69 S73 C S sing 1.76 N N
122 C69 C74 C C doub 1.36 N Y
123 S73 O77 S O doub 1.42 N N
124 S73 O78 S O doub 1.42 N N
125 S73 O79 S O sing 1.52 N N
126 O79 H79 O H sing 0.97 N N
127 C74 C76 C C sing 1.39 N Y
128 C74 H74 C H sing 1.08 N N
129 C76 S83 C S sing 1.76 N N
130 S83 O85 S O sing 1.52 N N
131 S83 O86 S O doub 1.42 N N
132 S83 O84 S O doub 1.42 N N
133 O85 H85 O H sing 0.97 N N