Chemical Components in the PDB

pdbe.org/chem
wwPDB
EMDataBank
spacer

PDBeChem : Chemical Bonds

 Molecule : SC7    

Bonds between two atoms of the molecule

Total Number of Bonds: 85


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 F1 C21 F C sing 1.35 N N
2 F2 C23 F C sing 1.35 N N
3 C1 C2 C C sing 1.4 N Y
4 C1 C6 C C doub 1.38 N Y
5 C1 H1 C H sing 1.08 N N
6 C2 C7 C C sing 1.48 N N
7 C2 C3 C C doub 1.39 N Y
8 C3 C4 C C sing 1.39 N Y
9 C3 H3 C H sing 1.08 N N
10 C4 C15 C C sing 1.48 N N
11 C4 C5 C C doub 1.4 N Y
12 C5 C6 C C sing 1.38 N Y
13 C5 H5 C H sing 1.08 N N
14 C6 C14 C C sing 1.51 N N
15 C7 N1 C N sing 1.35 N N
16 C7 O1 C O doub 1.22 N N
17 N1 C9 N C sing 1.47 N N
18 N1 C8 N C sing 1.46 N N
19 C8 C12 C C sing 1.53 N N
20 C8 H81 C H sing 1.09 N N
21 C8 H82 C H sing 1.09 N N
22 C9 C10 C C sing 1.53 N N
23 C9 H91 C H sing 1.09 N N
24 C9 H92 C H sing 1.09 N N
25 C10 C11 C C sing 1.53 N N
26 C10 H101 C H sing 1.09 N N
27 C10 H102 C H sing 1.09 N N
28 C11 H111 C H sing 1.09 N N
29 C11 H112 C H sing 1.09 N N
30 C11 H113 C H sing 1.09 N N
31 C12 C13 C C sing 1.53 N N
32 C12 H121 C H sing 1.09 N N
33 C12 H122 C H sing 1.09 N N
34 C13 H131 C H sing 1.09 N N
35 C13 H132 C H sing 1.09 N N
36 C13 H133 C H sing 1.09 N N
37 C14 H141 C H sing 1.09 N N
38 C14 H142 C H sing 1.09 N N
39 C14 H143 C H sing 1.09 N N
40 C15 O2 C O doub 1.22 N N
41 C15 N2 C N sing 1.35 N N
42 N2 C16 N C sing 1.46 N N
43 N2 HN2 N H sing 0.97 N N
44 C16 C18 C C sing 1.53 N N
45 C16 C17 C C sing 1.53 N N
46 C16 H16 C H sing 1.09 N N
47 C17 O3 C O sing 1.43 N N
48 C17 C25 C C sing 1.53 N N
49 C17 H17 C H sing 1.09 N N
50 O3 HO3 O H sing 0.97 N N
51 C18 C19 C C sing 1.51 N N
52 C18 H181 C H sing 1.09 N N
53 C18 H182 C H sing 1.09 N N
54 C19 C24 C C doub 1.38 N Y
55 C19 C20 C C sing 1.38 N Y
56 C20 C21 C C doub 1.38 N Y
57 C20 H20 C H sing 1.08 N N
58 C21 C22 C C sing 1.38 N Y
59 C22 C23 C C doub 1.38 N Y
60 C22 H22 C H sing 1.08 N N
61 C23 C24 C C sing 1.38 N Y
62 C24 H24 C H sing 1.08 N N
63 C25 C26 C C sing 1.53 N N
64 C25 N3 C N sing 1.47 N N
65 C25 H25 C H sing 1.09 N N
66 C26 C27 C C sing 1.53 N N
67 C26 H261 C H sing 1.09 N N
68 C26 H262 C H sing 1.09 N N
69 C27 O4 C O sing 1.43 N N
70 C27 C28 C C sing 1.53 N N
71 C27 H27 C H sing 1.09 N N
72 C28 C29 C C sing 1.53 N N
73 C28 H281 C H sing 1.09 N N
74 C28 H282 C H sing 1.09 N N
75 C29 N3 C N sing 1.47 N N
76 C29 H291 C H sing 1.09 N N
77 C29 H292 C H sing 1.09 N N
78 N3 HN3 N H sing 1.01 N N
79 O4 C30 O C sing 1.43 N N
80 C30 C31 C C sing 1.53 N N
81 C30 H301 C H sing 1.09 N N
82 C30 H302 C H sing 1.09 N N
83 C31 H311 C H sing 1.09 N N
84 C31 H312 C H sing 1.09 N N
85 C31 H313 C H sing 1.09 N N