data_SC7
#
_chem_comp.id SC7
_chem_comp.name
"N'-{(1S,2R)-1-(3,5-DIFLUOROBENZYL)-2-[(2R,4S)-4-ETHOXYPIPERIDIN-2-YL]-2-HYDROXYETHYL}-5-METHYL-N,N-DIPROPYLISOPHTHALAMIDE"
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C31 H43 F2 N3 O4"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2007-07-26
_chem_comp.pdbx_modified_date 2011-06-04
_chem_comp.pdbx_ambiguous_flag ?
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 559.688
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code SC7
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 2QP8
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
SC7 F1 F1 F 0 1 N N N N N N 26.798 11.102 18.930 1.111 -5.309 0.744 F1 SC7 1
SC7 F2 F2 F 0 1 N N N N N N 22.698 13.469 18.463 -1.684 -3.213 -2.456 F2 SC7 2
SC7 C1 C1 C 0 1 Y N N N N N 26.890 15.538 24.501 -4.021 1.754 -1.044 C1 SC7 3
SC7 C2 C2 C 0 1 Y N N N N N 27.041 14.358 23.724 -3.968 0.591 -0.272 C2 SC7 4
SC7 C3 C3 C 0 1 Y N N N N N 25.896 13.554 23.411 -2.735 0.023 0.042 C3 SC7 5
SC7 C4 C4 C 0 1 Y N N N N N 24.608 13.945 23.870 -1.563 0.621 -0.415 C4 SC7 6
SC7 C5 C5 C 0 1 Y N N N N N 24.457 15.135 24.636 -1.630 1.784 -1.186 C5 SC7 7
SC7 C6 C6 C 0 1 Y N N N N N 25.598 15.926 24.952 -2.855 2.341 -1.495 C6 SC7 8
SC7 C7 C7 C 0 1 N N N N N N 28.372 13.944 23.296 -5.217 -0.036 0.210 C7 SC7 9
SC7 N1 N1 N 0 1 N N N N N N 28.634 13.735 21.975 -6.174 0.722 0.782 N1 SC7 10
SC7 O1 O1 O 0 1 N N N N N N 29.247 13.773 24.141 -5.381 -1.234 0.090 O1 SC7 11
SC7 C8 C8 C 0 1 N N N N N N 29.980 13.297 21.631 -6.030 2.179 0.820 C8 SC7 12
SC7 C9 C9 C 0 1 N N N N N N 27.681 13.931 20.886 -7.359 0.087 1.366 C9 SC7 13
SC7 C10 C10 C 0 1 N N N N N N 28.248 15.003 19.946 -7.045 -0.361 2.795 C10 SC7 14
SC7 C11 C11 C 0 1 N N N N N N 28.874 16.206 20.711 -8.283 -1.023 3.404 C11 SC7 15
SC7 C12 C12 C 0 1 N N N N N N 29.933 11.814 21.164 -6.853 2.803 -0.308 C12 SC7 16
SC7 C13 C13 C 0 1 N N N N N N 29.085 10.899 22.066 -6.587 4.309 -0.361 C13 SC7 17
SC7 C14 C14 C 0 1 N N N N N N 25.425 17.155 25.753 -2.920 3.596 -2.327 C14 SC7 18
SC7 C15 C15 C 0 1 N N N N N N 23.428 13.154 23.543 -0.250 0.025 -0.086 C15 SC7 19
SC7 O2 O2 O 0 1 N N N N N N 22.320 13.655 23.400 -0.193 -0.987 0.585 O2 SC7 20
SC7 N2 N2 N 0 1 N N N N N N 23.659 11.824 23.412 0.883 0.604 -0.530 N2 SC7 21
SC7 C16 C16 C 0 1 N N S N N N 22.554 10.914 23.053 2.183 0.014 -0.203 C16 SC7 22
SC7 C17 C17 C 0 1 N N R N N N 22.035 10.093 24.262 3.261 1.099 -0.248 C17 SC7 23
SC7 O3 O3 O 0 1 N N N N N N 21.019 9.166 23.819 3.392 1.586 -1.585 O3 SC7 24
SC7 C18 C18 C 0 1 N N N N N N 23.040 9.980 21.922 2.517 -1.079 -1.220 C18 SC7 25
SC7 C19 C19 C 0 1 Y N N N N N 23.641 10.789 20.788 1.525 -2.205 -1.091 C19 SC7 26
SC7 C20 C20 C 0 1 Y N N N N N 24.984 10.560 20.379 1.776 -3.251 -0.223 C20 SC7 27
SC7 C21 C21 C 0 1 Y N N N N N 25.545 11.319 19.311 0.865 -4.287 -0.104 C21 SC7 28
SC7 C22 C22 C 0 1 Y N N N N N 24.768 12.310 18.657 -0.298 -4.274 -0.854 C22 SC7 29
SC7 C23 C23 C 0 1 Y N N N N N 23.430 12.537 19.071 -0.549 -3.226 -1.723 C23 SC7 30
SC7 C24 C24 C 0 1 Y N N N N N 22.863 11.782 20.130 0.361 -2.189 -1.837 C24 SC7 31
SC7 C25 C25 C 0 1 N N R N N N 21.404 10.975 25.331 4.596 0.511 0.214 C25 SC7 32
SC7 C26 C26 C 0 1 N N N N N N 20.192 11.747 24.767 5.674 1.596 0.169 C26 SC7 33
SC7 C27 C27 C 0 1 N N S N N N 19.393 12.441 25.854 7.004 1.009 0.651 C27 SC7 34
SC7 C28 C28 C 0 1 N N N N N N 19.017 11.457 26.958 6.823 0.450 2.065 C28 SC7 35
SC7 C29 C29 C 0 1 N N N N N N 20.256 10.786 27.532 5.712 -0.602 2.055 C29 SC7 36
SC7 N3 N3 N 0 1 N N N N N N 20.996 10.093 26.442 4.461 0.010 1.587 N3 SC7 37
SC7 O4 O4 O 0 1 N N N N N N 18.235 12.988 25.236 8.001 2.032 0.665 O4 SC7 38
SC7 C30 C30 C 0 1 N N N N N N 17.445 13.697 26.174 9.327 1.555 0.428 C30 SC7 39
SC7 C31 C31 C 0 1 N N N N N N 16.412 14.505 25.383 10.306 2.730 0.466 C31 SC7 40
SC7 H1 H1 H 0 1 N N N N N N 27.753 16.138 24.748 -4.976 2.193 -1.292 H1 SC7 41
SC7 H3 H3 H 0 1 N N N N N N 26.011 12.653 22.827 -2.689 -0.876 0.639 H3 SC7 42
SC7 H5 H5 H 0 1 N N N N N N 23.478 15.438 24.977 -0.722 2.248 -1.542 H5 SC7 43
SC7 H81 1H8 H 0 1 N N N N N N 30.376 13.926 20.820 -6.385 2.554 1.780 H81 SC7 44
SC7 H82 2H8 H 0 1 N N N N N N 30.633 13.386 22.512 -4.980 2.443 0.693 H82 SC7 45
SC7 H91 1H9 H 0 1 N N N N N N 27.538 12.988 20.338 -8.182 0.801 1.381 H91 SC7 46
SC7 H92 2H9 H 0 1 N N N N N N 26.707 14.250 21.285 -7.640 -0.779 0.767 H92 SC7 47
SC7 H101 1H10 H 0 0 N N N N N N 29.030 14.542 19.326 -6.222 -1.075 2.779 H101 SC7 48
SC7 H102 2H10 H 0 0 N N N N N N 27.415 15.390 19.341 -6.765 0.505 3.394 H102 SC7 49
SC7 H111 1H11 H 0 0 N N N N N N 29.022 15.933 21.766 -8.059 -1.342 4.422 H111 SC7 50
SC7 H112 2H11 H 0 0 N N N N N N 29.844 16.463 20.260 -9.106 -0.310 3.420 H112 SC7 51
SC7 H113 3H11 H 0 0 N N N N N N 28.199 17.072 20.647 -8.564 -1.889 2.805 H113 SC7 52
SC7 H121 1H12 H 0 0 N N N N N N 29.500 11.790 20.153 -6.570 2.350 -1.258 H121 SC7 53
SC7 H122 2H12 H 0 0 N N N N N N 30.964 11.434 21.201 -7.913 2.628 -0.123 H122 SC7 54
SC7 H131 1H13 H 0 0 N N N N N N 28.883 9.953 21.543 -7.174 4.753 -1.165 H131 SC7 55
SC7 H132 2H13 H 0 0 N N N N N N 29.633 10.693 22.997 -6.870 4.762 0.589 H132 SC7 56
SC7 H133 3H13 H 0 0 N N N N N N 28.133 11.398 22.302 -5.527 4.484 -0.545 H133 SC7 57
SC7 H141 1H14 H 0 0 N N N N N N 25.382 16.894 26.821 -2.892 4.468 -1.673 H141 SC7 58
SC7 H142 2H14 H 0 0 N N N N N N 26.274 17.831 25.575 -2.069 3.625 -3.008 H142 SC7 59
SC7 H143 3H14 H 0 0 N N N N N N 24.490 17.655 25.460 -3.846 3.603 -2.902 H143 SC7 60
SC7 HN2 HN2 H 0 1 N N N N N N 24.579 11.460 23.559 0.837 1.412 -1.065 HN2 SC7 61
SC7 H16 H16 H 0 1 N N N N N N 21.701 11.519 22.712 2.145 -0.419 0.797 H16 SC7 62
SC7 H17 H17 H 0 1 N N N N N N 22.906 9.574 24.689 2.978 1.920 0.412 H17 SC7 63
SC7 HO3 HO3 H 0 1 N N N N N N 20.438 8.963 24.543 3.643 0.908 -2.227 HO3 SC7 64
SC7 H181 1H18 H 0 0 N N N N N N 23.804 9.296 22.322 2.468 -0.665 -2.227 H181 SC7 65
SC7 H182 2H18 H 0 0 N N N N N N 22.182 9.409 21.537 3.522 -1.456 -1.031 H182 SC7 66
SC7 H20 H20 H 0 1 N N N N N N 25.579 9.810 20.878 2.684 -3.261 0.362 H20 SC7 67
SC7 H22 H22 H 0 1 N N N N N N 25.192 12.888 17.849 -1.010 -5.082 -0.762 H22 SC7 68
SC7 H24 H24 H 0 1 N N N N N N 21.843 11.961 20.436 0.164 -1.369 -2.511 H24 SC7 69
SC7 H25 H25 H 0 1 N N N N N N 22.125 11.729 25.681 4.879 -0.309 -0.446 H25 SC7 70
SC7 H261 1H26 H 0 0 N N N N N N 20.559 12.508 24.063 5.785 1.957 -0.854 H261 SC7 71
SC7 H262 2H26 H 0 0 N N N N N N 19.530 11.021 24.273 5.385 2.423 0.818 H262 SC7 72
SC7 H27 H27 H 0 1 N N N N N N 19.986 13.237 26.328 7.313 0.208 -0.021 H27 SC7 73
SC7 H281 1H28 H 0 0 N N N N N N 18.500 12.001 27.762 7.755 -0.008 2.397 H281 SC7 74
SC7 H282 2H28 H 0 0 N N N N N N 18.362 10.683 26.532 6.552 1.259 2.744 H282 SC7 75
SC7 H291 1H29 H 0 0 N N N N N N 20.906 11.546 27.990 5.990 -1.417 1.386 H291 SC7 76
SC7 H292 2H29 H 0 0 N N N N N N 19.955 10.052 28.295 5.571 -0.991 3.063 H292 SC7 77
SC7 HN3 HN3 H 0 1 N N N N N N 20.399 9.383 26.068 4.162 0.743 2.212 HN3 SC7 78
SC7 H301 1H30 H 0 0 N N N N N N 16.939 12.994 26.852 9.596 0.832 1.199 H301 SC7 79
SC7 H302 2H30 H 0 0 N N N N N N 18.072 14.362 26.785 9.371 1.076 -0.550 H302 SC7 80
SC7 H311 1H31 H 0 0 N N N N N N 15.534 14.699 26.017 11.318 2.366 0.285 H311 SC7 81
SC7 H312 2H31 H 0 0 N N N N N N 16.856 15.461 25.070 10.037 3.452 -0.305 H312 SC7 82
SC7 H313 3H31 H 0 0 N N N N N N 16.104 13.935 24.494 10.262 3.208 1.444 H313 SC7 83
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
SC7 F1 C21 SING N N 1
SC7 F2 C23 SING N N 2
SC7 C1 C2 SING Y N 3
SC7 C1 C6 DOUB Y N 4
SC7 C1 H1 SING N N 5
SC7 C2 C7 SING N N 6
SC7 C2 C3 DOUB Y N 7
SC7 C3 C4 SING Y N 8
SC7 C3 H3 SING N N 9
SC7 C4 C15 SING N N 10
SC7 C4 C5 DOUB Y N 11
SC7 C5 C6 SING Y N 12
SC7 C5 H5 SING N N 13
SC7 C6 C14 SING N N 14
SC7 C7 N1 SING N N 15
SC7 C7 O1 DOUB N N 16
SC7 N1 C9 SING N N 17
SC7 N1 C8 SING N N 18
SC7 C8 C12 SING N N 19
SC7 C8 H81 SING N N 20
SC7 C8 H82 SING N N 21
SC7 C9 C10 SING N N 22
SC7 C9 H91 SING N N 23
SC7 C9 H92 SING N N 24
SC7 C10 C11 SING N N 25
SC7 C10 H101 SING N N 26
SC7 C10 H102 SING N N 27
SC7 C11 H111 SING N N 28
SC7 C11 H112 SING N N 29
SC7 C11 H113 SING N N 30
SC7 C12 C13 SING N N 31
SC7 C12 H121 SING N N 32
SC7 C12 H122 SING N N 33
SC7 C13 H131 SING N N 34
SC7 C13 H132 SING N N 35
SC7 C13 H133 SING N N 36
SC7 C14 H141 SING N N 37
SC7 C14 H142 SING N N 38
SC7 C14 H143 SING N N 39
SC7 C15 O2 DOUB N N 40
SC7 C15 N2 SING N N 41
SC7 N2 C16 SING N N 42
SC7 N2 HN2 SING N N 43
SC7 C16 C18 SING N N 44
SC7 C16 C17 SING N N 45
SC7 C16 H16 SING N N 46
SC7 C17 O3 SING N N 47
SC7 C17 C25 SING N N 48
SC7 C17 H17 SING N N 49
SC7 O3 HO3 SING N N 50
SC7 C18 C19 SING N N 51
SC7 C18 H181 SING N N 52
SC7 C18 H182 SING N N 53
SC7 C19 C24 DOUB Y N 54
SC7 C19 C20 SING Y N 55
SC7 C20 C21 DOUB Y N 56
SC7 C20 H20 SING N N 57
SC7 C21 C22 SING Y N 58
SC7 C22 C23 DOUB Y N 59
SC7 C22 H22 SING N N 60
SC7 C23 C24 SING Y N 61
SC7 C24 H24 SING N N 62
SC7 C25 C26 SING N N 63
SC7 C25 N3 SING N N 64
SC7 C25 H25 SING N N 65
SC7 C26 C27 SING N N 66
SC7 C26 H261 SING N N 67
SC7 C26 H262 SING N N 68
SC7 C27 O4 SING N N 69
SC7 C27 C28 SING N N 70
SC7 C27 H27 SING N N 71
SC7 C28 C29 SING N N 72
SC7 C28 H281 SING N N 73
SC7 C28 H282 SING N N 74
SC7 C29 N3 SING N N 75
SC7 C29 H291 SING N N 76
SC7 C29 H292 SING N N 77
SC7 N3 HN3 SING N N 78
SC7 O4 C30 SING N N 79
SC7 C30 C31 SING N N 80
SC7 C30 H301 SING N N 81
SC7 C30 H302 SING N N 82
SC7 C31 H311 SING N N 83
SC7 C31 H312 SING N N 84
SC7 C31 H313 SING N N 85
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
SC7 SMILES ACDLabs 10.04 O=C(N(CCC)CCC)c1cc(cc(c1)C)C(=O)NC(Cc2cc(F)cc(F)c2)C(O)C3NCCC(OCC)C3
SC7 SMILES_CANONICAL CACTVS 3.341 CCCN(CCC)C(=O)c1cc(C)cc(c1)C(=O)N[C@@H](Cc2cc(F)cc(F)c2)[C@H](O)[C@H]3C[C@H](CCN3)OCC
SC7 SMILES CACTVS 3.341 CCCN(CCC)C(=O)c1cc(C)cc(c1)C(=O)N[CH](Cc2cc(F)cc(F)c2)[CH](O)[CH]3C[CH](CCN3)OCC
SC7 SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 CCCN(CCC)C(=O)c1cc(cc(c1)C(=O)N[C@@H](Cc2cc(cc(c2)F)F)[C@@H]([C@H]3C[C@H](CCN3)OCC)O)C
SC7 SMILES "OpenEye OEToolkits" 1.5.0 CCCN(CCC)C(=O)c1cc(cc(c1)C(=O)NC(Cc2cc(cc(c2)F)F)C(C3CC(CCN3)OCC)O)C
SC7 InChI InChI 1.03 InChI=1S/C31H43F2N3O4/c1-5-10-36(11-6-2)31(39)23-13-20(4)12-22(17-23)30(38)35-28(16-21-14-24(32)18-25(33)15-21)29(37)27-19-26(40-7-3)8-9-34-27/h12-15,17-18,26-29,34,37H,5-11,16,19H2,1-4H3,(H,35,38)/t26-,27+,28-,29+/m0/s1
SC7 InChIKey InChI 1.03 JWYOKBPWLVCFKU-ICYKMPLBSA-N
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
SC7 "SYSTEMATIC NAME" ACDLabs 10.04 "N'-{(1S,2R)-1-(3,5-difluorobenzyl)-2-[(2R,4S)-4-ethoxypiperidin-2-yl]-2-hydroxyethyl}-5-methyl-N,N-dipropylbenzene-1,3-dicarboxamide"
SC7 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "N'-[(1R,2S)-3-(3,5-difluorophenyl)-1-[(2R,4S)-4-ethoxypiperidin-2-yl]-1-hydroxy-propan-2-yl]-5-methyl-N,N-dipropyl-benzene-1,3-dicarboxamide"
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
SC7 'Create component' 2007-07-26 RCSB
SC7 'Modify descriptor' 2011-06-04 RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2025.03.3 'Core functionality.'
pdbeccdutils 1.0.0 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
SC7 F1 F 13.392 -1.875 1
SC7 F2 F 15.990 2.625 2
SC7 C1 C 8.196 -4.875 3
SC7 C2 C 6.897 -4.125 4
SC7 C3 C 6.897 -2.625 5
SC7 C4 C 8.196 -1.875 6
SC7 C5 C 9.495 -2.625 7
SC7 C6 C 9.495 -4.125 8
SC7 C7 C 5.598 -4.875 9
SC7 N1 N 5.598 -6.375 10
SC7 O1 O 4.299 -4.125 11
SC7 C8 C 6.897 -7.125 12
SC7 C9 C 4.299 -7.125 13
SC7 C10 C 4.299 -8.625 14
SC7 C11 C 3.000 -9.375 15
SC7 C12 C 6.897 -8.625 16
SC7 C13 C 8.196 -9.375 17
SC7 C14 C 10.794 -4.875 18
SC7 C15 C 8.196 -0.375 19
SC7 O2 O 6.897 0.375 20
SC7 N2 N 9.495 0.375 21
SC7 C16 C 9.495 1.875 22
SC7 C17 C 8.196 2.625 23
SC7 O3 O 6.897 1.875 24
SC7 C18 C 10.794 2.625 25
SC7 C19 C 12.093 1.875 26
SC7 C20 C 12.093 0.375 27
SC7 C21 C 13.392 -0.375 28
SC7 C22 C 14.691 0.375 29
SC7 C23 C 14.691 1.875 30
SC7 C24 C 13.392 2.625 31
SC7 C25 C 8.196 4.125 32
SC7 C26 C 6.897 4.875 33
SC7 C27 C 6.897 6.375 34
SC7 C28 C 8.196 7.125 35
SC7 C29 C 9.495 6.375 36
SC7 N3 N 9.495 4.875 37
SC7 O4 O 5.598 7.125 38
SC7 C30 C 5.598 8.625 39
SC7 C31 C 4.299 9.375 40
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
SC7 F1 C21 SINGLE NONE 1
SC7 F2 C23 SINGLE NONE 2
SC7 C1 C2 DOUBLE NONE 3
SC7 C1 C6 SINGLE NONE 4
SC7 C2 C7 SINGLE NONE 5
SC7 C2 C3 SINGLE NONE 6
SC7 C3 C4 DOUBLE NONE 7
SC7 C4 C15 SINGLE NONE 8
SC7 C4 C5 SINGLE NONE 9
SC7 C5 C6 DOUBLE NONE 10
SC7 C6 C14 SINGLE NONE 11
SC7 C7 N1 SINGLE NONE 12
SC7 C7 O1 DOUBLE NONE 13
SC7 N1 C9 SINGLE NONE 14
SC7 N1 C8 SINGLE NONE 15
SC7 C8 C12 SINGLE NONE 16
SC7 C9 C10 SINGLE NONE 17
SC7 C10 C11 SINGLE NONE 18
SC7 C12 C13 SINGLE NONE 19
SC7 C15 O2 DOUBLE NONE 20
SC7 C15 N2 SINGLE NONE 21
SC7 N2 C16 SINGLE NONE 22
SC7 C16 C18 SINGLE BEGINDASH 23
SC7 C16 C17 SINGLE NONE 24
SC7 C17 O3 SINGLE BEGINDASH 25
SC7 C17 C25 SINGLE NONE 26
SC7 C18 C19 SINGLE NONE 27
SC7 C19 C24 SINGLE NONE 28
SC7 C19 C20 DOUBLE NONE 29
SC7 C20 C21 SINGLE NONE 30
SC7 C21 C22 DOUBLE NONE 31
SC7 C22 C23 SINGLE NONE 32
SC7 C23 C24 DOUBLE NONE 33
SC7 C25 C26 SINGLE BEGINWEDGE 34
SC7 C25 N3 SINGLE NONE 35
SC7 C26 C27 SINGLE NONE 36
SC7 C27 O4 SINGLE BEGINWEDGE 37
SC7 C27 C28 SINGLE NONE 38
SC7 C28 C29 SINGLE NONE 39
SC7 C29 N3 SINGLE NONE 40
SC7 O4 C30 SINGLE NONE 41
SC7 C30 C31 SINGLE NONE 42
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
SC7 MurckoScaffold S1 scaffold 'O=C(N[C@@H](Cc1ccccc1)C[C@H]1CCCCN1)c1ccccc1' InChI=1S/C21H26N2O/c24-21(18-11-5-2-6-12-18)23-20(15-17-9-3-1-4-10-17)16-19-13-7-8-14-22-19/h1-6,9-12,19-20,22H,7-8,13-16H2,(H,23,24)/t19-,20+/m1/s1 UECQFJSWDMGCGT-UXHICEINSA-N
SC7 amide F1 fragment CC(N)=O InChI=1S/C2H5NO/c1-2(3)4/h1H3,(H2,3,4) DLFVBJFMPXGRIB-UHFFFAOYSA-N
SC7 phenyl F2 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
SC7 C1 S1 1
SC7 C2 S1 1
SC7 C3 S1 1
SC7 C4 S1 1
SC7 C5 S1 1
SC7 C6 S1 1
SC7 C15 S1 1
SC7 O2 S1 1
SC7 N2 S1 1
SC7 C16 S1 1
SC7 C17 S1 1
SC7 C18 S1 1
SC7 C19 S1 1
SC7 C20 S1 1
SC7 C21 S1 1
SC7 C22 S1 1
SC7 C23 S1 1
SC7 C24 S1 1
SC7 C25 S1 1
SC7 C26 S1 1
SC7 C27 S1 1
SC7 C28 S1 1
SC7 C29 S1 1
SC7 N3 S1 1
SC7 N1 F1 1
SC7 C7 F1 1
SC7 O1 F1 1
SC7 C2 F1 1
SC7 N2 F1 2
SC7 C15 F1 2
SC7 O2 F1 2
SC7 C4 F1 2
SC7 C1 F2 1
SC7 C2 F2 1
SC7 C3 F2 1
SC7 C4 F2 1
SC7 C5 F2 1
SC7 C6 F2 1
SC7 C19 F2 2
SC7 C24 F2 2
SC7 C23 F2 2
SC7 C22 F2 2
SC7 C21 F2 2
SC7 C20 F2 2
#
_pdbe_chem_comp_rdkit_properties.comp_id SC7
_pdbe_chem_comp_rdkit_properties.exactmw 559.322
_pdbe_chem_comp_rdkit_properties.amw 559.698
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 7
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 3
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 18
_pdbe_chem_comp_rdkit_properties.NumHBD 3
_pdbe_chem_comp_rdkit_properties.NumHBA 5
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 40
_pdbe_chem_comp_rdkit_properties.NumAtoms 83
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 9
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 2
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.548
_pdbe_chem_comp_rdkit_properties.NumRings 3
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 2
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 1
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 4
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 296.455
_pdbe_chem_comp_rdkit_properties.tpsa 90.900
_pdbe_chem_comp_rdkit_properties.CrippenClogP 4.176
_pdbe_chem_comp_rdkit_properties.CrippenMR 150.362
_pdbe_chem_comp_rdkit_properties.chi0v 19.231
_pdbe_chem_comp_rdkit_properties.chi1v 9.964
_pdbe_chem_comp_rdkit_properties.chi2v 4.014
_pdbe_chem_comp_rdkit_properties.chi3v 4.014
_pdbe_chem_comp_rdkit_properties.chi4v 2.542
_pdbe_chem_comp_rdkit_properties.chi0n 62.231
_pdbe_chem_comp_rdkit_properties.chi1n 31.267
_pdbe_chem_comp_rdkit_properties.chi2n 4.014
_pdbe_chem_comp_rdkit_properties.chi3n 4.014
_pdbe_chem_comp_rdkit_properties.chi4n 2.542
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -2.880
_pdbe_chem_comp_rdkit_properties.kappa1 7.181
_pdbe_chem_comp_rdkit_properties.kappa2 15.210
_pdbe_chem_comp_rdkit_properties.kappa3 8.811
_pdbe_chem_comp_rdkit_properties.Phi 2.731
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
SC7 UniChem ZINC ZINC000016052468
SC7 UniChem SureChEMBL SCHEMBL14457361
SC7 UniChem 'PubChem TPHARMA' 16694620
SC7 UniChem BindingDb 50227337
SC7 UniChem PubChem 11592145
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
SC7 F1 -5.918 -4.617 -1.646 ETKDGv3 1
SC7 F2 -7.111 -2.881 2.653 ETKDGv3 2
SC7 C1 4.775 -1.032 0.430 ETKDGv3 3
SC7 C2 4.235 -0.189 -0.465 ETKDGv3 4
SC7 C3 2.772 -0.229 -0.709 ETKDGv3 5
SC7 C4 1.981 -1.078 -0.027 ETKDGv3 6
SC7 C5 2.599 -2.005 0.957 ETKDGv3 7
SC7 C6 3.921 -1.972 1.190 ETKDGv3 8
SC7 C7 5.080 0.741 -1.247 ETKDGv3 9
SC7 N1 6.269 1.345 -0.691 ETKDGv3 10
SC7 O1 4.749 1.007 -2.434 ETKDGv3 11
SC7 C8 6.264 1.890 0.677 ETKDGv3 12
SC7 C9 7.409 1.637 -1.573 ETKDGv3 13
SC7 C10 8.120 0.348 -2.004 ETKDGv3 14
SC7 C11 8.846 -0.320 -0.839 ETKDGv3 15
SC7 C12 5.953 3.393 0.684 ETKDGv3 16
SC7 C13 4.527 3.693 0.226 ETKDGv3 17
SC7 C14 4.547 -2.942 2.148 ETKDGv3 18
SC7 C15 0.518 -1.102 -0.268 ETKDGv3 19
SC7 O2 0.061 -0.671 -1.363 ETKDGv3 20
SC7 N2 -0.385 -1.593 0.736 ETKDGv3 21
SC7 C16 -1.828 -1.709 0.499 ETKDGv3 22
SC7 C17 -2.507 -0.339 0.822 ETKDGv3 23
SC7 O3 -2.810 -0.244 2.192 ETKDGv3 24
SC7 C18 -2.369 -2.906 1.321 ETKDGv3 25
SC7 C19 -3.808 -3.233 1.022 ETKDGv3 26
SC7 C20 -4.156 -3.786 -0.154 ETKDGv3 27
SC7 C21 -5.576 -4.067 -0.454 ETKDGv3 28
SC7 C22 -6.522 -3.775 0.447 ETKDGv3 29
SC7 C23 -6.149 -3.176 1.744 ETKDGv3 30
SC7 C24 -4.863 -2.922 2.020 ETKDGv3 31
SC7 C25 -3.783 -0.069 -0.015 ETKDGv3 32
SC7 C26 -4.443 1.279 0.389 ETKDGv3 33
SC7 C27 -5.304 1.829 -0.751 ETKDGv3 34
SC7 C28 -4.431 2.089 -1.999 ETKDGv3 35
SC7 C29 -3.199 1.166 -2.065 ETKDGv3 36
SC7 N3 -3.475 -0.145 -1.463 ETKDGv3 37
SC7 O4 -5.911 3.036 -0.318 ETKDGv3 38
SC7 C30 -7.152 3.253 -0.964 ETKDGv3 39
SC7 C31 -8.293 2.698 -0.119 ETKDGv3 40
SC7 H1 5.845 -1.043 0.596 ETKDGv3 41
SC7 H3 2.343 0.458 -1.430 ETKDGv3 42
SC7 H5 1.985 -2.733 1.472 ETKDGv3 43
SC7 H81 7.262 1.726 1.140 ETKDGv3 44
SC7 H82 5.529 1.366 1.322 ETKDGv3 45
SC7 H91 8.142 2.304 -1.069 ETKDGv3 46
SC7 H92 7.053 2.180 -2.475 ETKDGv3 47
SC7 H101 8.865 0.596 -2.790 ETKDGv3 48
SC7 H102 7.388 -0.365 -2.443 ETKDGv3 49
SC7 H111 9.605 0.369 -0.411 ETKDGv3 50
SC7 H112 9.362 -1.235 -1.199 ETKDGv3 51
SC7 H113 8.128 -0.610 -0.045 ETKDGv3 52
SC7 H121 6.079 3.775 1.720 ETKDGv3 53
SC7 H122 6.672 3.937 0.035 ETKDGv3 54
SC7 H131 4.316 4.775 0.359 ETKDGv3 55
SC7 H132 3.795 3.112 0.826 ETKDGv3 56
SC7 H133 4.404 3.446 -0.849 ETKDGv3 57
SC7 H141 5.523 -2.556 2.513 ETKDGv3 58
SC7 H142 3.889 -3.101 3.030 ETKDGv3 59
SC7 H143 4.712 -3.913 1.637 ETKDGv3 60
SC7 HN2 -0.040 -1.694 1.717 ETKDGv3 61
SC7 H16 -1.978 -1.960 -0.573 ETKDGv3 62
SC7 H17 -1.789 0.473 0.558 ETKDGv3 63
SC7 HO3 -1.950 -0.100 2.667 ETKDGv3 64
SC7 H181 -2.236 -2.716 2.408 ETKDGv3 65
SC7 H182 -1.754 -3.804 1.090 ETKDGv3 66
SC7 H20 -3.405 -4.019 -0.898 ETKDGv3 67
SC7 H22 -7.563 -3.978 0.228 ETKDGv3 68
SC7 H24 -4.598 -2.477 2.971 ETKDGv3 69
SC7 H25 -4.529 -0.856 0.217 ETKDGv3 70
SC7 H261 -3.666 2.034 0.648 ETKDGv3 71
SC7 H262 -5.075 1.127 1.292 ETKDGv3 72
SC7 H27 -6.060 1.040 -0.987 ETKDGv3 73
SC7 H281 -5.051 1.935 -2.909 ETKDGv3 74
SC7 H282 -4.081 3.144 -2.009 ETKDGv3 75
SC7 H291 -2.896 1.027 -3.125 ETKDGv3 76
SC7 H292 -2.340 1.642 -1.542 ETKDGv3 77
SC7 HN3 -4.286 -0.577 -1.967 ETKDGv3 78
SC7 H301 -7.196 2.832 -1.996 ETKDGv3 79
SC7 H302 -7.298 4.349 -1.066 ETKDGv3 80
SC7 H311 -9.265 2.934 -0.601 ETKDGv3 81
SC7 H312 -8.273 3.156 0.893 ETKDGv3 82
SC7 H313 -8.203 1.596 -0.020 ETKDGv3 83
#