Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : LIC    

Bonds between two atoms of the molecule

Total Number of Bonds: 63


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 N1 C1 N C sing 1.35 N N
2 N1 C2 N C sing 1.4 N N
3 N1 C3 N C sing 1.39 N N
4 C7 C9 C C sing 1.51 N N
5 C7 N5 C N sing 1.47 N N
6 C7 H71 C H sing 1.09 N N
7 C7 H72 C H sing 1.09 N N
8 C13 C14 C C doub 1.38 N Y
9 C13 C9 C C sing 1.38 N Y
10 C13 H13 C H sing 1.08 N N
11 C15 C12 C C sing 1.38 N Y
12 C15 C11 C C doub 1.38 N Y
13 C15 H15 C H sing 1.08 N N
14 C21 C24 C C doub 1.39 N Y
15 C21 C25 C C sing 1.39 N Y
16 C21 O30 C O sing 1.36 N N
17 C22 C2 C C sing 1.39 N Y
18 C22 C25 C C doub 1.38 N Y
19 C22 H22 C H sing 1.08 N N
20 C24 C23 C C sing 1.38 N Y
21 C24 H24 C H sing 1.08 N N
22 CL16 C12 CL C sing 1.74 N N
23 C12 C9 C C doub 1.38 N Y
24 C11 C14 C C sing 1.38 N Y
25 C11 H11 C H sing 1.08 N N
26 C14 H14 C H sing 1.08 N N
27 N5 C1 N C sing 1.35 N N
28 N5 HN5 N H sing 0.97 N N
29 C1 O4 C O doub 1.22 N N
30 C2 C23 C C doub 1.39 N Y
31 C25 H25 C H sing 1.08 N N
32 O30 C31 O C sing 1.43 N N
33 C31 H311 C H sing 1.09 N N
34 C31 H312 C H sing 1.09 N N
35 C31 H313 C H sing 1.09 N N
36 C23 H23 C H sing 1.08 N N
37 C3 C35 C C sing 1.4 N Y
38 C3 N42 C N doub 1.33 N Y
39 C35 C37 C C doub 1.38 N Y
40 C35 H35 C H sing 1.08 N N
41 C37 N39 C N sing 1.32 N Y
42 C37 H37 C H sing 1.08 N N
43 N39 C41 N C doub 1.32 N Y
44 C41 N42 C N sing 1.32 N Y
45 C41 N36 C N sing 1.38 N N
46 N36 C43 N C sing 1.47 N N
47 N36 HN36 N H sing 0.97 N N
48 C43 C45 C C sing 1.53 N N
49 C43 C47 C C sing 1.53 N N
50 C43 H43 C H sing 1.09 N N
51 C45 H451 C H sing 1.09 N N
52 C45 H452 C H sing 1.09 N N
53 C45 H453 C H sing 1.09 N N
54 C47 C53 C C sing 1.53 N N
55 C47 O52 C O sing 1.43 N N
56 C47 C51 C C sing 1.53 N N
57 C53 H531 C H sing 1.09 N N
58 C53 H532 C H sing 1.09 N N
59 C53 H533 C H sing 1.09 N N
60 O52 HO52 O H sing 0.97 N N
61 C51 H511 C H sing 1.09 N N
62 C51 H512 C H sing 1.09 N N
63 C51 H513 C H sing 1.09 N N