data_LIC
#
_chem_comp.id LIC
_chem_comp.name 3-(2-CHLOROBENZYL)-1-(2-{[(1S)-2-HYDROXY-1,2-DIMETHYLPROPYL]AMINO}PYRIMIDIN-4-YL)-1-(4-METHOXYPHENYL)UREA
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C24 H28 Cl N5 O3"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms 3-PYRIDIN-4-YL-2,4-DIHYDRO-INDENO[1,2-.C.]PYRAZOLE
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2006-03-29
_chem_comp.pdbx_modified_date 2020-06-17
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 469.964
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code LIC
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details ?
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 2GHM
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
LIC N1 N1 N 0 1 N N N N N N 3.551 -0.832 20.475 -0.099 0.614 0.119 N1 LIC 1
LIC C7 C7 C 0 1 N N N N N N 1.949 -3.270 22.643 -2.070 -2.458 -0.323 C7 LIC 2
LIC C13 C13 C 0 1 Y N N N N N 2.909 -5.554 22.231 -4.046 -2.858 -1.806 C13 LIC 3
LIC C15 C15 C 0 1 Y N N N N N 4.648 -5.302 24.383 -5.792 -2.539 0.316 C15 LIC 4
LIC C21 C21 C 0 1 Y N N N N N 5.300 -0.652 16.739 -3.064 3.543 -0.032 C21 LIC 5
LIC C22 C22 C 0 1 Y N N N N N 5.463 -0.512 19.118 -1.981 1.746 1.127 C22 LIC 6
LIC C24 C24 C 0 1 Y N N N N N 3.944 -0.967 16.826 -2.183 3.393 -1.093 C24 LIC 7
LIC CL16 CL16 CL 0 0 N N N N N N 3.812 -2.780 25.072 -3.811 -2.087 2.106 CL16 LIC 8
LIC C12 C12 C 0 1 Y N N N N N 3.771 -4.266 24.068 -4.427 -2.430 0.520 C12 LIC 9
LIC C11 C11 C 0 1 Y N N N N N 4.638 -6.478 23.639 -6.281 -2.813 -0.947 C11 LIC 10
LIC C14 C14 C 0 1 Y N N N N N 3.778 -6.590 22.555 -5.409 -2.972 -2.008 C14 LIC 11
LIC C9 C9 C 0 1 Y N N N N N 2.896 -4.393 22.997 -3.555 -2.583 -0.543 C9 LIC 12
LIC N5 N5 N 0 1 N N N N N N 2.748 -2.133 22.211 -1.718 -1.045 -0.160 N5 LIC 13
LIC C1 C1 C 0 1 N N N N N N 3.191 -2.005 20.972 -0.435 -0.690 0.049 C1 LIC 14
LIC O4 O4 O 0 1 N N N N N N 3.302 -2.966 20.237 0.420 -1.545 0.176 O4 LIC 15
LIC C2 C2 C 0 1 Y N N N N N 4.112 -0.816 19.199 -1.096 1.598 0.068 C2 LIC 16
LIC C25 C25 C 0 1 Y N N N N N 6.059 -0.401 17.874 -2.963 2.716 1.077 C25 LIC 17
LIC O30 O30 O 0 1 N N N N N N 5.956 -0.541 15.544 -4.030 4.499 -0.081 O30 LIC 18
LIC C31 C31 C 0 1 N N N N N N 5.350 0.291 14.556 -3.878 5.177 -1.329 C31 LIC 19
LIC C23 C23 C 0 1 Y N N N N N 3.329 -1.049 18.074 -1.198 2.427 -1.041 C23 LIC 20
LIC C3 C3 C 0 1 Y N N N N N 3.344 0.420 21.076 1.237 0.982 0.241 C3 LIC 21
LIC C35 C35 C 0 1 Y N N N N N 3.393 1.544 20.266 1.584 2.304 0.522 C35 LIC 22
LIC C37 C37 C 0 1 Y N N N N N 3.171 2.794 20.830 2.923 2.625 0.634 C37 LIC 23
LIC N39 N39 N 0 1 Y N N N N N 2.892 2.879 22.130 3.832 1.675 0.474 N39 LIC 24
LIC C41 C41 C 0 1 Y N N N N N 2.809 1.795 22.913 3.474 0.428 0.208 C41 LIC 25
LIC N42 N42 N 0 1 Y N N N N N 3.043 0.579 22.384 2.201 0.079 0.098 N42 LIC 26
LIC N36 N36 N 0 1 N N N N N N 2.478 1.998 24.204 4.454 -0.536 0.048 N36 LIC 27
LIC C43 C43 C 0 1 N N S N N N 2.415 0.871 25.124 5.868 -0.171 0.172 C43 LIC 28
LIC C45 C45 C 0 1 N N N N N N 3.084 1.285 26.432 6.276 -0.211 1.646 C45 LIC 29
LIC C47 C47 C 0 1 N N N N N N 0.981 0.387 25.318 6.722 -1.163 -0.620 C47 LIC 30
LIC C53 C53 C 0 1 N N N N N N 0.932 -0.773 26.299 6.313 -1.123 -2.094 C53 LIC 31
LIC O52 O52 O 0 1 N N N N N N 0.217 1.459 25.860 6.523 -2.481 -0.106 O52 LIC 32
LIC C51 C51 C 0 1 N N N N N N 0.259 -0.008 24.037 8.198 -0.782 -0.490 C51 LIC 33
LIC H71 1H7 H 0 1 N N N N N N 1.346 -2.995 23.521 -1.539 -2.868 -1.182 H71 LIC 34
LIC H72 2H7 H 0 1 N N N N N N 1.265 -3.584 21.841 -1.787 -3.008 0.575 H72 LIC 35
LIC H13 H13 H 0 1 N N N N N N 2.245 -5.651 21.385 -3.365 -2.982 -2.635 H13 LIC 36
LIC H15 H15 H 0 1 N N N N N N 5.338 -5.192 25.207 -6.473 -2.414 1.144 H15 LIC 37
LIC H22 H22 H 0 1 N N N N N N 6.044 -0.363 20.016 -1.902 1.102 1.991 H22 LIC 38
LIC H24 H24 H 0 1 N N N N N N 3.372 -1.147 15.928 -2.263 4.037 -1.956 H24 LIC 39
LIC H11 H11 H 0 1 N N N N N N 5.293 -7.295 23.902 -7.346 -2.902 -1.106 H11 LIC 40
LIC H14 H14 H 0 1 N N N N N N 3.784 -7.490 21.958 -5.792 -3.186 -2.995 H14 LIC 41
LIC HN5 HN5 H 0 1 N N N N N N 2.971 -1.421 22.877 -2.408 -0.365 -0.204 HN5 LIC 42
LIC H25 H25 H 0 1 N N N N N N 7.099 -0.123 17.787 -3.652 2.830 1.901 H25 LIC 43
LIC H311 1H31 H 0 0 N N N N N N 5.194 1.298 14.970 -3.996 4.464 -2.146 H311 LIC 44
LIC H312 2H31 H 0 0 N N N N N N 6.007 0.354 13.676 -4.635 5.956 -1.414 H312 LIC 45
LIC H313 3H31 H 0 0 N N N N N N 4.381 -0.138 14.260 -2.887 5.626 -1.380 H313 LIC 46
LIC H23 H23 H 0 1 N N N N N N 2.279 -1.286 18.164 -0.510 2.313 -1.865 H23 LIC 47
LIC H35 H35 H 0 1 N N N N N N 3.601 1.449 19.210 0.822 3.060 0.648 H35 LIC 48
LIC H37 H37 H 0 1 N N N N N N 3.224 3.685 20.223 3.225 3.639 0.850 H37 LIC 49
LIC HN36 HN36 H 0 0 N N N N N N 3.169 2.620 24.573 4.205 -1.453 -0.147 HN36 LIC 50
LIC H43 H43 H 0 1 N N N N N N 2.957 0.010 24.707 6.019 0.834 -0.220 H43 LIC 51
LIC H451 1H45 H 0 0 N N N N N N 4.168 1.385 26.274 6.125 -1.216 2.039 H451 LIC 52
LIC H452 2H45 H 0 0 N N N N N N 2.672 2.249 26.765 7.328 0.061 1.739 H452 LIC 53
LIC H453 3H45 H 0 0 N N N N N N 2.894 0.520 27.199 5.668 0.496 2.211 H453 LIC 54
LIC H531 1H53 H 0 0 N N N N N N 0.920 -1.723 25.744 6.465 -0.118 -2.487 H531 LIC 55
LIC H532 2H53 H 0 0 N N N N N N 1.818 -0.740 26.950 6.921 -1.830 -2.659 H532 LIC 56
LIC H533 3H53 H 0 0 N N N N N N 0.022 -0.696 26.913 5.261 -1.395 -2.187 H533 LIC 57
LIC HO52 HO52 H 0 0 N N N N N N 0.047 1.294 26.780 7.078 -3.073 -0.632 HO52 LIC 58
LIC H511 1H51 H 0 0 N N N N N N -0.818 -0.103 24.237 8.489 -0.810 0.560 H511 LIC 59
LIC H512 2H51 H 0 0 N N N N N N 0.423 0.764 23.271 8.806 -1.488 -1.055 H512 LIC 60
LIC H513 3H51 H 0 0 N N N N N N 0.651 -0.971 23.677 8.350 0.224 -0.883 H513 LIC 61
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
LIC N1 C1 SING N N 1
LIC N1 C2 SING N N 2
LIC N1 C3 SING N N 3
LIC C7 C9 SING N N 4
LIC C7 N5 SING N N 5
LIC C7 H71 SING N N 6
LIC C7 H72 SING N N 7
LIC C13 C14 DOUB Y N 8
LIC C13 C9 SING Y N 9
LIC C13 H13 SING N N 10
LIC C15 C12 SING Y N 11
LIC C15 C11 DOUB Y N 12
LIC C15 H15 SING N N 13
LIC C21 C24 DOUB Y N 14
LIC C21 C25 SING Y N 15
LIC C21 O30 SING N N 16
LIC C22 C2 SING Y N 17
LIC C22 C25 DOUB Y N 18
LIC C22 H22 SING N N 19
LIC C24 C23 SING Y N 20
LIC C24 H24 SING N N 21
LIC CL16 C12 SING N N 22
LIC C12 C9 DOUB Y N 23
LIC C11 C14 SING Y N 24
LIC C11 H11 SING N N 25
LIC C14 H14 SING N N 26
LIC N5 C1 SING N N 27
LIC N5 HN5 SING N N 28
LIC C1 O4 DOUB N N 29
LIC C2 C23 DOUB Y N 30
LIC C25 H25 SING N N 31
LIC O30 C31 SING N N 32
LIC C31 H311 SING N N 33
LIC C31 H312 SING N N 34
LIC C31 H313 SING N N 35
LIC C23 H23 SING N N 36
LIC C3 C35 SING Y N 37
LIC C3 N42 DOUB Y N 38
LIC C35 C37 DOUB Y N 39
LIC C35 H35 SING N N 40
LIC C37 N39 SING Y N 41
LIC C37 H37 SING N N 42
LIC N39 C41 DOUB Y N 43
LIC C41 N42 SING Y N 44
LIC C41 N36 SING N N 45
LIC N36 C43 SING N N 46
LIC N36 HN36 SING N N 47
LIC C43 C45 SING N N 48
LIC C43 C47 SING N N 49
LIC C43 H43 SING N N 50
LIC C45 H451 SING N N 51
LIC C45 H452 SING N N 52
LIC C45 H453 SING N N 53
LIC C47 C53 SING N N 54
LIC C47 O52 SING N N 55
LIC C47 C51 SING N N 56
LIC C53 H531 SING N N 57
LIC C53 H532 SING N N 58
LIC C53 H533 SING N N 59
LIC O52 HO52 SING N N 60
LIC C51 H511 SING N N 61
LIC C51 H512 SING N N 62
LIC C51 H513 SING N N 63
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
LIC SMILES ACDLabs 10.04 Clc1ccccc1CNC(=O)N(c2nc(ncc2)NC(C(O)(C)C)C)c3ccc(OC)cc3
LIC SMILES_CANONICAL CACTVS 3.341 COc1ccc(cc1)N(C(=O)NCc2ccccc2Cl)c3ccnc(N[C@@H](C)C(C)(C)O)n3
LIC SMILES CACTVS 3.341 COc1ccc(cc1)N(C(=O)NCc2ccccc2Cl)c3ccnc(N[CH](C)C(C)(C)O)n3
LIC SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 C[C@@H](C(C)(C)O)Nc1nccc(n1)N(c2ccc(cc2)OC)C(=O)NCc3ccccc3Cl
LIC SMILES "OpenEye OEToolkits" 1.5.0 CC(C(C)(C)O)Nc1nccc(n1)N(c2ccc(cc2)OC)C(=O)NCc3ccccc3Cl
LIC InChI InChI 1.03 InChI=1S/C24H28ClN5O3/c1-16(24(2,3)32)28-22-26-14-13-21(29-22)30(18-9-11-19(33-4)12-10-18)23(31)27-15-17-7-5-6-8-20(17)25/h5-14,16,32H,15H2,1-4H3,(H,27,31)(H,26,28,29)/t16-/m0/s1
LIC InChIKey InChI 1.03 ZHBOBAJCKHPQBT-INIZCTEOSA-N
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
LIC "SYSTEMATIC NAME" ACDLabs 10.04 3-(2-chlorobenzyl)-1-(2-{[(1S)-2-hydroxy-1,2-dimethylpropyl]amino}pyrimidin-4-yl)-1-(4-methoxyphenyl)urea
LIC "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 3-[(2-chlorophenyl)methyl]-1-[2-[[(2S)-3-hydroxy-3-methyl-butan-2-yl]amino]pyrimidin-4-yl]-1-(4-methoxyphenyl)urea
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
LIC 'Create component' 2006-03-29 RCSB
LIC 'Modify descriptor' 2011-06-04 RCSB
LIC 'Modify synonyms' 2020-06-05 PDBE
#
_pdbx_chem_comp_synonyms.ordinal 1
_pdbx_chem_comp_synonyms.comp_id LIC
_pdbx_chem_comp_synonyms.name 3-PYRIDIN-4-YL-2,4-DIHYDRO-INDENO[1,2-.C.]PYRAZOLE
_pdbx_chem_comp_synonyms.provenance ?
_pdbx_chem_comp_synonyms.type ?
#
_pdbe_chem_comp_synonyms.comp_id LIC
_pdbe_chem_comp_synonyms.name '3-PYRIDIN-4-YL-2,4-DIHYDRO-INDENO[1,2-.C.]PYRAZOLE'
_pdbe_chem_comp_synonyms.provenance wwPDB
_pdbe_chem_comp_synonyms.type ?
#
loop_
_software.name
_software.version
_software.description
rdkit 2025.03.3 'Core functionality.'
pdbeccdutils 1.0.0 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
LIC N1 N 8.196 1.125 1
LIC C7 C 6.897 -2.625 2
LIC C13 C 5.598 -4.875 3
LIC C15 C 3.000 -3.375 4
LIC C21 C 4.299 3.375 5
LIC C22 C 6.897 3.375 6
LIC C24 C 4.299 1.875 7
LIC CL16 Cl 4.299 -1.125 8
LIC C12 C 4.299 -2.625 9
LIC C11 C 3.000 -4.875 10
LIC C14 C 4.299 -5.625 11
LIC C9 C 5.598 -3.375 12
LIC N5 N 6.897 -1.125 13
LIC C1 C 8.196 -0.375 14
LIC O4 O 9.495 -1.125 15
LIC C2 C 6.897 1.875 16
LIC C25 C 5.598 4.125 17
LIC O30 O 3.000 4.125 18
LIC C31 C 3.000 5.625 19
LIC C23 C 5.598 1.125 20
LIC C3 C 9.495 1.875 21
LIC C35 C 9.495 3.375 22
LIC C37 C 10.794 4.125 23
LIC N39 N 12.093 3.375 24
LIC C41 C 12.093 1.875 25
LIC N42 N 10.794 1.125 26
LIC N36 N 13.392 1.125 27
LIC C43 C 14.691 1.875 28
LIC C45 C 14.691 3.375 29
LIC C47 C 15.990 1.125 30
LIC C53 C 17.290 0.375 31
LIC O52 O 16.740 2.424 32
LIC C51 C 15.240 -0.174 33
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
LIC N1 C1 SINGLE NONE 1
LIC N1 C2 SINGLE NONE 2
LIC N1 C3 SINGLE NONE 3
LIC C7 C9 SINGLE NONE 4
LIC C7 N5 SINGLE NONE 5
LIC C13 C14 DOUBLE NONE 6
LIC C13 C9 SINGLE NONE 7
LIC C15 C12 SINGLE NONE 8
LIC C15 C11 DOUBLE NONE 9
LIC C21 C24 DOUBLE NONE 10
LIC C21 C25 SINGLE NONE 11
LIC C21 O30 SINGLE NONE 12
LIC C22 C2 SINGLE NONE 13
LIC C22 C25 DOUBLE NONE 14
LIC C24 C23 SINGLE NONE 15
LIC CL16 C12 SINGLE NONE 16
LIC C12 C9 DOUBLE NONE 17
LIC C11 C14 SINGLE NONE 18
LIC N5 C1 SINGLE NONE 19
LIC C1 O4 DOUBLE NONE 20
LIC C2 C23 DOUBLE NONE 21
LIC O30 C31 SINGLE NONE 22
LIC C3 C35 DOUBLE NONE 23
LIC C3 N42 SINGLE NONE 24
LIC C35 C37 SINGLE NONE 25
LIC C37 N39 DOUBLE NONE 26
LIC N39 C41 SINGLE NONE 27
LIC C41 N42 DOUBLE NONE 28
LIC C41 N36 SINGLE NONE 29
LIC N36 C43 SINGLE NONE 30
LIC C43 C45 SINGLE BEGINWEDGE 31
LIC C43 C47 SINGLE NONE 32
LIC C47 C53 SINGLE NONE 33
LIC C47 O52 SINGLE NONE 34
LIC C47 C51 SINGLE NONE 35
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
LIC MurckoScaffold S1 scaffold O=C(NCc1ccccc1)N(c1ccccc1)c1ccncn1 InChI=1S/C18H16N4O/c23-18(20-13-15-7-3-1-4-8-15)22(16-9-5-2-6-10-16)17-11-12-19-14-21-17/h1-12,14H,13H2,(H,20,23) VJGAAFOPOABPFS-UHFFFAOYSA-N
LIC phenyl F1 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
LIC pyrimidine F2 fragment c1cncnc1 InChI=1S/C4H4N2/c1-2-5-4-6-3-1/h1-4H CZPWVGJYEJSRLH-UHFFFAOYSA-N
LIC Z31190928 F3 fragment CC(C)Nc1ncccn1 InChI=1S/C7H11N3/c1-6(2)10-7-8-4-3-5-9-7/h3-6H,1-2H3,(H,8,9,10) FTCYIGBVOHNHCD-UHFFFAOYSA-N
LIC Z54628578 F4 fragment CNc1ncccn1 InChI=1S/C5H7N3/c1-6-5-7-3-2-4-8-5/h2-4H,1H3,(H,6,7,8) BQNXHDSGGRTFNX-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
LIC N1 S1 1
LIC C7 S1 1
LIC C13 S1 1
LIC C15 S1 1
LIC C21 S1 1
LIC C22 S1 1
LIC C24 S1 1
LIC C12 S1 1
LIC C11 S1 1
LIC C14 S1 1
LIC C9 S1 1
LIC N5 S1 1
LIC C1 S1 1
LIC O4 S1 1
LIC C2 S1 1
LIC C25 S1 1
LIC C23 S1 1
LIC C3 S1 1
LIC C35 S1 1
LIC C37 S1 1
LIC N39 S1 1
LIC C41 S1 1
LIC N42 S1 1
LIC C13 F1 1
LIC C14 F1 1
LIC C11 F1 1
LIC C15 F1 1
LIC C12 F1 1
LIC C9 F1 1
LIC C21 F1 2
LIC C24 F1 2
LIC C23 F1 2
LIC C2 F1 2
LIC C22 F1 2
LIC C25 F1 2
LIC C35 F2 1
LIC C3 F2 1
LIC N42 F2 1
LIC C41 F2 1
LIC N39 F2 1
LIC C37 F2 1
LIC C45 F3 1
LIC C43 F3 1
LIC C47 F3 1
LIC N36 F3 1
LIC C41 F3 1
LIC N39 F3 1
LIC C37 F3 1
LIC C35 F3 1
LIC C3 F3 1
LIC N42 F3 1
LIC C43 F4 1
LIC N36 F4 1
LIC C41 F4 1
LIC N39 F4 1
LIC C37 F4 1
LIC C35 F4 1
LIC C3 F4 1
LIC N42 F4 1
#
_pdbe_chem_comp_rdkit_properties.comp_id LIC
_pdbe_chem_comp_rdkit_properties.exactmw 469.188
_pdbe_chem_comp_rdkit_properties.amw 469.973
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 8
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 3
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 13
_pdbe_chem_comp_rdkit_properties.NumHBD 3
_pdbe_chem_comp_rdkit_properties.NumHBA 6
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 33
_pdbe_chem_comp_rdkit_properties.NumAtoms 61
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 9
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 2
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.292
_pdbe_chem_comp_rdkit_properties.NumRings 3
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 3
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 0
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 1
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 237.679
_pdbe_chem_comp_rdkit_properties.tpsa 99.610
_pdbe_chem_comp_rdkit_properties.CrippenClogP 3.099
_pdbe_chem_comp_rdkit_properties.CrippenMR 126.887
_pdbe_chem_comp_rdkit_properties.chi0v 16.595
_pdbe_chem_comp_rdkit_properties.chi1v 8.593
_pdbe_chem_comp_rdkit_properties.chi2v 3.581
_pdbe_chem_comp_rdkit_properties.chi3v 3.581
_pdbe_chem_comp_rdkit_properties.chi4v 2.024
_pdbe_chem_comp_rdkit_properties.chi0n 43.839
_pdbe_chem_comp_rdkit_properties.chi1n 22.018
_pdbe_chem_comp_rdkit_properties.chi2n 3.298
_pdbe_chem_comp_rdkit_properties.chi3n 3.298
_pdbe_chem_comp_rdkit_properties.chi4n 1.888
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -3.360
_pdbe_chem_comp_rdkit_properties.kappa1 6.835
_pdbe_chem_comp_rdkit_properties.kappa2 10.504
_pdbe_chem_comp_rdkit_properties.kappa3 6.336
_pdbe_chem_comp_rdkit_properties.Phi 2.176
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
LIC UniChem ZINC ZINC000013985996
LIC UniChem SureChEMBL SCHEMBL4836232
LIC UniChem 'PubChem TPHARMA' 16824788
LIC UniChem PubChem 6540300
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
LIC N1 -1.225 0.031 -0.447 ETKDGv3 1
LIC C7 -3.253 -2.379 -2.640 ETKDGv3 2
LIC C13 -5.539 -2.028 -1.500 ETKDGv3 3
LIC C15 -5.138 -4.278 0.143 ETKDGv3 4
LIC C21 -0.203 4.173 -0.394 ETKDGv3 5
LIC C22 -1.758 2.396 0.252 ETKDGv3 6
LIC C24 0.584 3.287 -1.038 ETKDGv3 7
LIC CL16 -2.647 -4.889 -0.931 ETKDGv3 8
LIC C12 -4.104 -3.903 -0.848 ETKDGv3 9
LIC C11 -6.256 -3.554 0.262 ETKDGv3 10
LIC C14 -6.465 -2.374 -0.598 ETKDGv3 11
LIC C9 -4.294 -2.827 -1.646 ETKDGv3 12
LIC N5 -2.137 -1.742 -1.947 ETKDGv3 13
LIC C1 -2.243 -0.441 -1.349 ETKDGv3 14
LIC O4 -3.213 0.309 -1.645 ETKDGv3 15
LIC C2 -0.890 1.425 -0.449 ETKDGv3 16
LIC C25 -1.432 3.694 0.277 ETKDGv3 17
LIC O30 0.094 5.544 -0.330 ETKDGv3 18
LIC C31 1.241 6.153 -0.916 ETKDGv3 19
LIC C23 0.221 1.855 -1.067 ETKDGv3 20
LIC C3 -0.507 -0.855 0.437 ETKDGv3 21
LIC C35 -1.078 -1.962 0.942 ETKDGv3 22
LIC C37 -0.294 -2.810 1.857 ETKDGv3 23
LIC N39 0.918 -2.468 2.184 ETKDGv3 24
LIC C41 1.509 -1.265 1.667 ETKDGv3 25
LIC N42 0.829 -0.515 0.847 ETKDGv3 26
LIC N36 2.842 -0.904 2.053 ETKDGv3 27
LIC C43 3.504 0.334 1.615 ETKDGv3 28
LIC C45 4.136 1.011 2.841 ETKDGv3 29
LIC C47 4.538 0.049 0.473 ETKDGv3 30
LIC C53 5.106 1.371 -0.078 ETKDGv3 31
LIC O52 5.619 -0.713 0.959 ETKDGv3 32
LIC C51 3.863 -0.699 -0.700 ETKDGv3 33
LIC H71 -3.686 -1.674 -3.382 ETKDGv3 34
LIC H72 -2.884 -3.255 -3.216 ETKDGv3 35
LIC H13 -5.703 -1.158 -2.123 ETKDGv3 36
LIC H15 -4.988 -5.142 0.779 ETKDGv3 37
LIC H22 -2.656 2.054 0.751 ETKDGv3 38
LIC H24 1.490 3.596 -1.540 ETKDGv3 39
LIC H11 -7.008 -3.830 0.989 ETKDGv3 40
LIC H14 -7.369 -1.788 -0.496 ETKDGv3 41
LIC HN5 -1.230 -2.258 -1.884 ETKDGv3 42
LIC H25 -2.071 4.399 0.794 ETKDGv3 43
LIC H311 1.221 7.241 -0.706 ETKDGv3 44
LIC H312 2.167 5.723 -0.479 ETKDGv3 45
LIC H313 1.233 6.003 -2.017 ETKDGv3 46
LIC H23 0.864 1.155 -1.586 ETKDGv3 47
LIC H35 -2.099 -2.231 0.710 ETKDGv3 48
LIC H37 -0.726 -3.716 2.259 ETKDGv3 49
LIC HN36 3.376 -1.578 2.648 ETKDGv3 50
LIC H43 2.740 1.044 1.226 ETKDGv3 51
LIC H451 3.380 1.100 3.650 ETKDGv3 52
LIC H452 4.478 2.038 2.596 ETKDGv3 53
LIC H453 4.993 0.418 3.225 ETKDGv3 54
LIC H531 4.288 2.052 -0.398 ETKDGv3 55
LIC H532 5.764 1.177 -0.953 ETKDGv3 56
LIC H533 5.727 1.886 0.684 ETKDGv3 57
LIC HO52 5.278 -1.608 1.217 ETKDGv3 58
LIC H511 4.593 -0.874 -1.520 ETKDGv3 59
LIC H512 3.482 -1.691 -0.379 ETKDGv3 60
LIC H513 3.014 -0.107 -1.104 ETKDGv3 61
#