Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : LH5    

Bonds between two atoms of the molecule

Total Number of Bonds: 51


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 N01 C04 N C doub 1.3 N N
2 C08 C10 C C doub 1.38 N Y
3 C08 C07 C C sing 1.4 N Y
4 C04 N05 C N sing 1.38 N N
5 C04 C07 C C sing 1.48 N N
6 C10 C12 C C sing 1.38 N Y
7 C07 C15 C C doub 1.4 N Y
8 O46 B45 O B sing 1.42 N N
9 O48 B45 O B sing 1.43 N N
10 O48 C30 O C sing 1.43 N N
11 C12 C30 C C sing 1.51 N N
12 C12 C13 C C doub 1.38 N Y
13 B45 C44 B C sing 1.58 N N
14 C15 C13 C C sing 1.39 N Y
15 C15 O16 C O sing 1.36 N N
16 C30 C32 C C sing 1.53 N N
17 O16 C17 O C sing 1.43 N N
18 C44 C42 C C doub 1.39 N Y
19 C44 C35 C C sing 1.4 N Y
20 C32 C35 C C sing 1.5 N N
21 C42 C40 C C sing 1.38 N Y
22 C35 C36 C C doub 1.38 N Y
23 C17 C20 C C sing 1.51 N N
24 C28 C20 C C doub 1.38 N Y
25 C28 N27 C N sing 1.32 N Y
26 C20 C21 C C sing 1.39 N Y
27 N27 C25 N C doub 1.32 N Y
28 C40 C38 C C doub 1.38 N Y
29 C36 C38 C C sing 1.38 N Y
30 C21 C23 C C doub 1.39 N Y
31 C25 C23 C C sing 1.38 N Y
32 C10 H1 C H sing 1.08 N N
33 C13 H2 C H sing 1.08 N N
34 C17 H3 C H sing 1.09 N N
35 C17 H4 C H sing 1.09 N N
36 C21 H5 C H sing 1.08 N N
37 C28 H6 C H sing 1.08 N N
38 N01 H7 N H sing 0.97 N N
39 N05 H8 N H sing 0.97 N N
40 N05 H9 N H sing 0.97 N N
41 C08 H10 C H sing 1.08 N N
42 C23 H11 C H sing 1.08 N N
43 C25 H12 C H sing 1.08 N N
44 C30 H13 C H sing 1.09 N N
45 C32 H14 C H sing 1.09 N N
46 C32 H15 C H sing 1.09 N N
47 C36 H16 C H sing 1.08 N N
48 C38 H17 C H sing 1.08 N N
49 C40 H18 C H sing 1.08 N N
50 C42 H19 C H sing 1.08 N N
51 O46 H20 O H sing 0.97 N N