data_LH5
#
_chem_comp.id LH5
_chem_comp.name
'4-[(3~{S})-1-oxidanyl-3,4-dihydro-2,1-benzoxaborinin-3-yl]-2-(pyridin-3-ylmethoxy)benzenecarboximidamide'
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula 'C21 H20 B N3 O3'
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2019-08-15
_chem_comp.pdbx_modified_date 2024-09-27
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 373.213
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code LH5
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 6SKB
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site PDBE
_chem_comp.pdbx_pcm Y
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
LH5 C10 C1 C 0 1 Y N N N N N -34.631 -22.968 -22.728 0.887 2.323 0.161 C10 LH5 1
LH5 C13 C2 C 0 1 Y N N N N N -34.535 -24.020 -20.581 -0.330 0.277 -0.140 C13 LH5 2
LH5 C15 C3 C 0 1 Y N N N N N -34.557 -25.268 -21.187 -1.524 0.951 0.067 C15 LH5 3
LH5 C17 C4 C 0 1 N N N N N N -34.696 -26.436 -19.048 -2.641 -1.122 -0.248 C17 LH5 4
LH5 C20 C5 C 0 1 Y N N N N N -33.501 -25.838 -18.353 -4.035 -1.694 -0.261 C20 LH5 5
LH5 C21 C6 C 0 1 Y N N N N N -33.645 -24.995 -17.260 -4.763 -1.740 -1.440 C21 LH5 6
LH5 C28 C7 C 0 1 Y N N N N N -32.211 -26.071 -18.801 -4.602 -2.184 0.900 C28 LH5 7
LH5 N01 N1 N 0 1 N N N N N N -35.464 -26.885 -24.355 -3.917 2.447 0.374 N01 LH5 8
LH5 C04 C8 C 0 1 N N N N N N -34.636 -26.685 -23.304 -2.777 3.058 0.534 C04 LH5 9
LH5 N05 N2 N 0 1 N N N N N N -33.834 -27.635 -22.948 -2.753 4.384 0.911 N05 LH5 10
LH5 C07 C9 C 0 1 Y N N N N N -34.613 -25.384 -22.587 -1.510 2.329 0.312 C07 LH5 11
LH5 C08 C10 C 0 1 Y N N N N N -34.647 -24.206 -23.343 -0.292 3.009 0.363 C08 LH5 12
LH5 C12 C11 C 0 1 Y N N N N N -34.572 -22.856 -21.345 0.868 0.962 -0.093 C12 LH5 13
LH5 O16 O1 O 0 1 N N N N N N -34.514 -26.451 -20.478 -2.703 0.280 0.020 O16 LH5 14
LH5 C23 C12 C 0 1 Y N N N N N -32.530 -24.432 -16.666 -6.042 -2.274 -1.405 C23 LH5 15
LH5 C25 C13 C 0 1 Y N N N N N -31.290 -24.726 -17.193 -6.545 -2.740 -0.204 C25 LH5 16
LH5 N27 N3 N 0 1 Y N N N N N -31.114 -25.531 -18.253 -5.821 -2.685 0.896 N27 LH5 17
LH5 C30 C14 C 0 1 N N S N N N -34.534 -21.507 -20.662 2.162 0.223 -0.318 C30 LH5 18
LH5 C32 C15 C 0 1 N N N N N N -35.661 -21.294 -19.665 2.755 -0.181 1.029 C32 LH5 19
LH5 C35 C16 C 0 1 Y N N N N N -35.592 -19.917 -19.049 4.097 -0.839 0.857 C35 LH5 20
LH5 C36 C17 C 0 1 Y N N N N N -36.034 -19.698 -17.744 4.587 -1.686 1.829 C36 LH5 21
LH5 C38 C18 C 0 1 Y N N N N N -36.017 -18.427 -17.191 5.824 -2.285 1.667 C38 LH5 22
LH5 C40 C19 C 0 1 Y N N N N N -35.556 -17.359 -17.934 6.580 -2.042 0.534 C40 LH5 23
LH5 C42 C20 C 0 1 Y N N N N N -35.119 -17.557 -19.236 6.100 -1.196 -0.448 C42 LH5 24
LH5 C44 C21 C 0 1 Y N N N N N -35.137 -18.830 -19.832 4.858 -0.597 -0.287 C44 LH5 25
LH5 B45 B1 B 0 1 N N N N N N -34.617 -19.098 -21.257 4.270 0.366 -1.387 B45 LH5 26
LH5 O46 O2 O 0 1 N N N N N N -34.064 -18.125 -22.018 4.887 0.526 -2.656 O46 LH5 27
LH5 O48 O3 O 0 1 N N N N N N -34.251 -20.390 -21.553 3.074 1.071 -1.029 O48 LH5 28
LH5 H1 H1 H 0 1 N N N N N N -34.665 -22.074 -23.333 1.829 2.850 0.196 H1 LH5 29
LH5 H2 H2 H 0 1 N N N N N N -34.489 -23.950 -19.504 -0.338 -0.784 -0.339 H2 LH5 30
LH5 H3 H3 H 0 1 N N N N N N -35.588 -25.839 -18.806 -2.054 -1.615 0.528 H3 LH5 31
LH5 H4 H4 H 0 1 N N N N N N -34.838 -27.468 -18.694 -2.171 -1.287 -1.217 H4 LH5 32
LH5 H5 H5 H 0 1 N N N N N N -34.630 -24.778 -16.873 -4.345 -1.368 -2.364 H5 LH5 33
LH5 H6 H6 H 0 1 N N N N N N -32.081 -26.730 -19.646 -4.039 -2.156 1.822 H6 LH5 34
LH5 H7 H7 H 0 1 N N N N N N -36.016 -26.076 -24.556 -3.936 1.531 0.054 H7 LH5 35
LH5 H8 H8 H 0 1 N N N N N N -33.198 -27.494 -22.190 -3.584 4.862 1.056 H8 LH5 36
LH5 H9 H9 H 0 1 N N N N N N -33.850 -28.510 -23.431 -1.905 4.839 1.030 H9 LH5 37
LH5 H10 H10 H 0 1 N N N N N N -34.686 -24.265 -24.421 -0.273 4.070 0.561 H10 LH5 38
LH5 H11 H11 H 0 1 N N N N N N -32.628 -23.779 -15.811 -6.638 -2.326 -2.304 H11 LH5 39
LH5 H12 H12 H 0 1 N N N N N N -30.418 -24.287 -16.731 -7.540 -3.157 -0.169 H12 LH5 40
LH5 H13 H13 H 0 1 N N N N N N -33.640 -21.570 -20.024 1.969 -0.671 -0.910 H13 LH5 41
LH5 H14 H14 H 0 1 N N N N N N -36.625 -21.407 -20.183 2.869 0.708 1.650 H14 LH5 42
LH5 H15 H15 H 0 1 N N N N N N -35.582 -22.048 -18.868 2.077 -0.876 1.523 H15 LH5 43
LH5 H16 H16 H 0 1 N N N N N N -36.394 -20.530 -17.157 4.005 -1.883 2.718 H16 LH5 44
LH5 H17 H17 H 0 1 N N N N N N -36.364 -18.273 -16.180 6.203 -2.947 2.431 H17 LH5 45
LH5 H18 H18 H 0 1 N N N N N N -35.535 -16.369 -17.502 7.545 -2.512 0.417 H18 LH5 46
LH5 H19 H19 H 0 1 N N N N N N -34.757 -16.713 -19.805 6.686 -1.003 -1.334 H19 LH5 47
LH5 H20 H20 H 0 1 N N N N N N -33.486 -18.516 -22.662 4.429 1.144 -3.241 H20 LH5 48
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
LH5 N01 C04 DOUB N N 1
LH5 C08 C10 DOUB Y N 2
LH5 C08 C07 SING Y N 3
LH5 C04 N05 SING N N 4
LH5 C04 C07 SING N N 5
LH5 C10 C12 SING Y N 6
LH5 C07 C15 DOUB Y N 7
LH5 O46 B45 SING N N 8
LH5 O48 B45 SING N N 9
LH5 O48 C30 SING N N 10
LH5 C12 C30 SING N N 11
LH5 C12 C13 DOUB Y N 12
LH5 B45 C44 SING N N 13
LH5 C15 C13 SING Y N 14
LH5 C15 O16 SING N N 15
LH5 C30 C32 SING N N 16
LH5 O16 C17 SING N N 17
LH5 C44 C42 DOUB Y N 18
LH5 C44 C35 SING Y N 19
LH5 C32 C35 SING N N 20
LH5 C42 C40 SING Y N 21
LH5 C35 C36 DOUB Y N 22
LH5 C17 C20 SING N N 23
LH5 C28 C20 DOUB Y N 24
LH5 C28 N27 SING Y N 25
LH5 C20 C21 SING Y N 26
LH5 N27 C25 DOUB Y N 27
LH5 C40 C38 DOUB Y N 28
LH5 C36 C38 SING Y N 29
LH5 C21 C23 DOUB Y N 30
LH5 C25 C23 SING Y N 31
LH5 C10 H1 SING N N 32
LH5 C13 H2 SING N N 33
LH5 C17 H3 SING N N 34
LH5 C17 H4 SING N N 35
LH5 C21 H5 SING N N 36
LH5 C28 H6 SING N N 37
LH5 N01 H7 SING N N 38
LH5 N05 H8 SING N N 39
LH5 N05 H9 SING N N 40
LH5 C08 H10 SING N N 41
LH5 C23 H11 SING N N 42
LH5 C25 H12 SING N N 43
LH5 C30 H13 SING N N 44
LH5 C32 H14 SING N N 45
LH5 C32 H15 SING N N 46
LH5 C36 H16 SING N N 47
LH5 C38 H17 SING N N 48
LH5 C40 H18 SING N N 49
LH5 C42 H19 SING N N 50
LH5 O46 H20 SING N N 51
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
LH5 InChI InChI 1.03 'InChI=1S/C21H20BN3O3/c23-21(24)17-8-7-16(11-20(17)27-13-14-4-3-9-25-12-14)19-10-15-5-1-2-6-18(15)22(26)28-19/h1-9,11-12,19,26H,10,13H2,(H3,23,24)/t19-/m0/s1'
LH5 InChIKey InChI 1.03 YENXZRUMZHNJKP-IBGZPJMESA-N
LH5 SMILES_CANONICAL CACTVS 3.385 'NC(=N)c1ccc(cc1OCc2cccnc2)[C@@H]3Cc4ccccc4B(O)O3'
LH5 SMILES CACTVS 3.385 'NC(=N)c1ccc(cc1OCc2cccnc2)[CH]3Cc4ccccc4B(O)O3'
LH5 SMILES_CANONICAL 'OpenEye OEToolkits' 2.0.7 '[H]/N=C(/c1ccc(cc1OCc2cccnc2)[C@@H]3Cc4ccccc4B(O3)O)\N'
LH5 SMILES 'OpenEye OEToolkits' 2.0.7 'B1(c2ccccc2CC(O1)c3ccc(c(c3)OCc4cccnc4)C(=N)N)O'
#
_pdbx_chem_comp_identifier.comp_id LH5
_pdbx_chem_comp_identifier.type 'SYSTEMATIC NAME'
_pdbx_chem_comp_identifier.program 'OpenEye OEToolkits'
_pdbx_chem_comp_identifier.program_version 2.0.7
_pdbx_chem_comp_identifier.identifier
'4-[(3~{S})-1-oxidanyl-3,4-dihydro-2,1-benzoxaborinin-3-yl]-2-(pyridin-3-ylmethoxy)benzenecarboximidamide'
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
LH5 'Create component' 2019-08-15 PDBE
LH5 'Initial release' 2019-09-25 RCSB
LH5 'Modify PCM' 2024-09-27 PDBE
#
_pdbx_chem_comp_pcm.pcm_id 1
_pdbx_chem_comp_pcm.comp_id LH5
_pdbx_chem_comp_pcm.modified_residue_id SER
_pdbx_chem_comp_pcm.type None
_pdbx_chem_comp_pcm.category 'Covalent chemical modification'
_pdbx_chem_comp_pcm.position 'Amino-acid side chain'
_pdbx_chem_comp_pcm.polypeptide_position 'Any position'
_pdbx_chem_comp_pcm.comp_id_linking_atom B45
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom OG
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession ?
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession ?
#
loop_
_software.name
_software.version
_software.description
rdkit 2025.03.3 'Core functionality.'
pdbeccdutils 1.0.0 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
LH5 C10 C 9.597 2.018 1
LH5 C13 C 10.896 -0.233 2
LH5 C15 C 12.195 0.517 3
LH5 C17 C 13.494 -1.732 4
LH5 C20 C 14.793 -2.482 5
LH5 C21 C 16.092 -1.732 6
LH5 C28 C 14.793 -3.982 7
LH5 N01 N 13.494 4.268 8
LH5 C04 C 13.494 2.768 9
LH5 N05 N 14.793 2.018 10
LH5 C07 C 12.195 2.018 11
LH5 C08 C 10.896 2.768 12
LH5 C12 C 9.597 0.517 13
LH5 O16 O 13.494 -0.233 14
LH5 C23 C 17.391 -2.482 15
LH5 C25 C 17.391 -3.982 16
LH5 N27 N 16.092 -4.732 17
LH5 C30 C 8.298 -0.233 18
LH5 C32 C 6.999 0.517 19
LH5 C35 C 5.700 -0.233 20
LH5 C36 C 4.359 0.570 21
LH5 C38 C 3.000 -0.201 22
LH5 C40 C 3.000 -1.764 23
LH5 C42 C 4.359 -2.534 24
LH5 C44 C 5.700 -1.732 25
LH5 B45 B 6.999 -2.482 26
LH5 O46 O 6.999 -3.982 27
LH5 O48 O 8.298 -1.732 28
LH5 H7 H 12.195 5.018 29
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
LH5 N01 C04 DOUBLE NONE 1
LH5 C08 C10 DOUBLE NONE 2
LH5 C08 C07 SINGLE NONE 3
LH5 C04 N05 SINGLE ENDUPRIGHT 4
LH5 C04 C07 SINGLE ENDDOWNRIGHT 5
LH5 C10 C12 SINGLE NONE 6
LH5 C07 C15 DOUBLE NONE 7
LH5 O46 B45 SINGLE NONE 8
LH5 O48 B45 SINGLE NONE 9
LH5 O48 C30 SINGLE NONE 10
LH5 C30 C12 SINGLE BEGINWEDGE 11
LH5 C12 C13 DOUBLE NONE 12
LH5 B45 C44 SINGLE NONE 13
LH5 C15 C13 SINGLE NONE 14
LH5 C15 O16 SINGLE NONE 15
LH5 C30 C32 SINGLE NONE 16
LH5 O16 C17 SINGLE NONE 17
LH5 C44 C42 SINGLE NONE 18
LH5 C44 C35 DOUBLE NONE 19
LH5 C32 C35 SINGLE NONE 20
LH5 C42 C40 DOUBLE NONE 21
LH5 C35 C36 SINGLE NONE 22
LH5 C17 C20 SINGLE NONE 23
LH5 C28 C20 SINGLE NONE 24
LH5 C28 N27 DOUBLE NONE 25
LH5 C20 C21 DOUBLE NONE 26
LH5 N27 C25 SINGLE NONE 27
LH5 C40 C38 SINGLE NONE 28
LH5 C36 C38 DOUBLE NONE 29
LH5 C21 C23 SINGLE NONE 30
LH5 C25 C23 DOUBLE NONE 31
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
LH5 MurckoScaffold S1 scaffold 'B1O[C@H](c2cccc(OCc3cccnc3)c2)Cc2ccccc21' InChI=1S/C20H18BNO2/c1-2-9-19-16(6-1)12-20(24-21-19)17-7-3-8-18(11-17)23-14-15-5-4-10-22-13-15/h1-11,13,20-21H,12,14H2/t20-/m0/s1 RMMCSRGDVBALMT-FQEVSTJZSA-N
LH5 phenyl F1 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
LH5 pyridine F2 fragment c1ccncc1 InChI=1S/C5H5N/c1-2-4-6-5-3-1/h1-5H JUJWROOIHBZHMG-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
LH5 C10 S1 1
LH5 C13 S1 1
LH5 C15 S1 1
LH5 C17 S1 1
LH5 C20 S1 1
LH5 C21 S1 1
LH5 C28 S1 1
LH5 C07 S1 1
LH5 C08 S1 1
LH5 C12 S1 1
LH5 O16 S1 1
LH5 C23 S1 1
LH5 C25 S1 1
LH5 N27 S1 1
LH5 C30 S1 1
LH5 C32 S1 1
LH5 C35 S1 1
LH5 C36 S1 1
LH5 C38 S1 1
LH5 C40 S1 1
LH5 C42 S1 1
LH5 C44 S1 1
LH5 B45 S1 1
LH5 O48 S1 1
LH5 C10 F1 1
LH5 C08 F1 1
LH5 C07 F1 1
LH5 C15 F1 1
LH5 C13 F1 1
LH5 C12 F1 1
LH5 C35 F1 2
LH5 C44 F1 2
LH5 C42 F1 2
LH5 C40 F1 2
LH5 C38 F1 2
LH5 C36 F1 2
LH5 C28 F2 1
LH5 C20 F2 1
LH5 C21 F2 1
LH5 C23 F2 1
LH5 C25 F2 1
LH5 N27 F2 1
#
_pdbe_chem_comp_rdkit_properties.comp_id LH5
_pdbe_chem_comp_rdkit_properties.exactmw 373.160
_pdbe_chem_comp_rdkit_properties.amw 373.221
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 6
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 4
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 6
_pdbe_chem_comp_rdkit_properties.NumHBD 3
_pdbe_chem_comp_rdkit_properties.NumHBA 5
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 28
_pdbe_chem_comp_rdkit_properties.NumAtoms 48
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 7
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 0
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.143
_pdbe_chem_comp_rdkit_properties.NumRings 4
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 3
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 0
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 1
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 191.519
_pdbe_chem_comp_rdkit_properties.tpsa 101.450
_pdbe_chem_comp_rdkit_properties.CrippenClogP 1.265
_pdbe_chem_comp_rdkit_properties.CrippenMR 105.932
_pdbe_chem_comp_rdkit_properties.chi0v 13.644
_pdbe_chem_comp_rdkit_properties.chi1v 7.517
_pdbe_chem_comp_rdkit_properties.chi2v 3.367
_pdbe_chem_comp_rdkit_properties.chi3v 3.367
_pdbe_chem_comp_rdkit_properties.chi4v 2.145
_pdbe_chem_comp_rdkit_properties.chi0n 33.644
_pdbe_chem_comp_rdkit_properties.chi1n 17.267
_pdbe_chem_comp_rdkit_properties.chi2n 3.367
_pdbe_chem_comp_rdkit_properties.chi3n 3.367
_pdbe_chem_comp_rdkit_properties.chi4n 2.145
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -3.155
_pdbe_chem_comp_rdkit_properties.kappa1 6.171
_pdbe_chem_comp_rdkit_properties.kappa2 7.838
_pdbe_chem_comp_rdkit_properties.kappa3 3.760
_pdbe_chem_comp_rdkit_properties.Phi 1.728
#
_pdbe_chem_comp_external_mappings.comp_id LH5
_pdbe_chem_comp_external_mappings.source UniChem
_pdbe_chem_comp_external_mappings.resource PubChem
_pdbe_chem_comp_external_mappings.resource_id 139033931
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
LH5 C10 -0.764 -0.332 2.761 ETKDGv3 1
LH5 C13 0.035 0.245 0.531 ETKDGv3 2
LH5 C15 1.403 0.408 1.098 ETKDGv3 3
LH5 C17 2.406 0.990 -1.119 ETKDGv3 4
LH5 C20 3.768 1.343 -1.639 ETKDGv3 5
LH5 C21 4.263 2.581 -1.484 ETKDGv3 6
LH5 C28 4.624 0.306 -2.263 ETKDGv3 7
LH5 N01 3.391 -0.486 3.884 ETKDGv3 8
LH5 C04 2.941 0.384 3.035 ETKDGv3 9
LH5 N05 3.743 1.525 2.720 ETKDGv3 10
LH5 C07 1.601 0.214 2.420 ETKDGv3 11
LH5 C08 0.459 -0.185 3.279 ETKDGv3 12
LH5 C12 -1.002 -0.094 1.319 ETKDGv3 13
LH5 O16 2.495 0.737 0.279 ETKDGv3 14
LH5 C23 5.623 2.896 -1.962 ETKDGv3 15
LH5 C25 6.358 1.934 -2.532 ETKDGv3 16
LH5 N27 5.823 0.607 -2.671 ETKDGv3 17
LH5 C30 -2.385 -0.299 0.744 ETKDGv3 18
LH5 C32 -2.456 -1.677 0.025 ETKDGv3 19
LH5 C35 -3.776 -1.868 -0.697 ETKDGv3 20
LH5 C36 -4.204 -3.235 -1.082 ETKDGv3 21
LH5 C38 -5.371 -3.424 -1.712 ETKDGv3 22
LH5 C40 -6.238 -2.272 -2.031 ETKDGv3 23
LH5 C42 -5.855 -1.031 -1.704 ETKDGv3 24
LH5 C44 -4.557 -0.816 -1.026 ETKDGv3 25
LH5 B45 -4.085 0.616 -0.602 ETKDGv3 26
LH5 O46 -5.049 1.686 -0.359 ETKDGv3 27
LH5 O48 -2.683 0.754 -0.160 ETKDGv3 28
LH5 H1 -1.583 -0.623 3.407 ETKDGv3 29
LH5 H2 -0.128 0.390 -0.528 ETKDGv3 30
LH5 H3 2.024 0.086 -1.641 ETKDGv3 31
LH5 H4 1.702 1.831 -1.307 ETKDGv3 32
LH5 H5 3.677 3.357 -1.006 ETKDGv3 33
LH5 H6 4.258 -0.705 -2.381 ETKDGv3 34
LH5 H7 2.851 -1.339 4.151 ETKDGv3 35
LH5 H8 3.367 2.302 2.132 ETKDGv3 36
LH5 H9 4.701 1.625 3.124 ETKDGv3 37
LH5 H10 0.606 -0.347 4.339 ETKDGv3 38
LH5 H11 6.022 3.896 -1.849 ETKDGv3 39
LH5 H12 7.358 2.150 -2.885 ETKDGv3 40
LH5 H13 -3.110 -0.296 1.595 ETKDGv3 41
LH5 H14 -1.638 -1.758 -0.724 ETKDGv3 42
LH5 H15 -2.323 -2.486 0.776 ETKDGv3 43
LH5 H16 -3.576 -4.085 -0.849 ETKDGv3 44
LH5 H17 -5.683 -4.423 -1.987 ETKDGv3 45
LH5 H18 -7.184 -2.433 -2.532 ETKDGv3 46
LH5 H19 -6.495 -0.191 -1.943 ETKDGv3 47
LH5 H20 -5.353 1.544 0.573 ETKDGv3 48
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